You are here

Home

ASPNIDRAFT_55058-T1, ASPNIDRAFT_55058-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_55058-T1
Unique NameASPNIDRAFT_55058-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000014.1:502140..503415-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_55058-T1 ID=ASPNIDRAFT_55058-T1|Name=ASPNIDRAFT_55058-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1276bp|location=Sequence derived from alignment at ACJE01000014.1:502140..503415- (Aspergillus niger ATCC 1015)
CTCGTGCGATTTCCCCATTCGACGTCTGTCCTTCGTTCTTTCGTCGTCTG
CATCCACTGACTCACCCGGTTCACTCTTTTTGACCGTCGAGACTATCACT
CTTCTCTCTCTCTCTCTCCCACTGAGAAGTCATTCTTTTACTTCTGTACC
ACCCACACTTGCATCGCGTATTACGCCTGTATATCGAATACTATCCATTC
CCCGCTATTGTACCGAGTCATTCTACTACTCACATATACTTCTCCACCAA
CATCCATCAATATGCGTTCCGTCTTCTACCTTGCTCTCAGCGCCATTGCG
TCTCTCGCGGCTGCTTCCGATAACCCGTTCAACAACCCCGAGGGTGGCTA
CACCTTCACCGCGGGCAGCCCGACTACTCTCACCTGGGACCCAACTACTA
ATGGCACGGTCACCCTGAGACTCCAGTGGGGTGCTGTTTTCACCACCACC
TCGGGCGAACTCATTGCCGGTAAGCTCCTGTCATGGATGTGGTGTGAAAA
GCTTCGATGAGATGCTAACGAGAAGAATCAGGGAACATCGACAACTCTGG
TAGCTACTCTTGGACTCCTTCTGCCAAGCTTGCAGCCCGCTCGGACTACA
CCATTGAGATCATCGATGATGATGACACGGACGATGTCAACTACACCCCG
CGCTTCTCAATCTCTGGTGCTACTGGAGCGGTGACCACCAGCACTGCCTC
GTCAACCACGTCTTCCGCTTCTAGCACCAGTTCTTCCACCGAACAGACCT
CCACCGTGAGCGCCACTACTCTGTCTACTACCACCTCGAGCGCTAGCTCT
TCCACCTCGACCACCACGGCTAGCTCGAACTCCACCGTTTCGGCGTCGTC
CTCCAAGACTGCCTCGTCCAGCTCTTCGAACACCGCGAGCTCCAGCGCTT
CTACCGCCAGCGTCACCACCGTCTCCACCAATGCCGGTATGGCCAACCAG
GCCTCTATTGGCATGATGGCCCTTATCTTTGGTGCTGTTGCGCTCATCTA
AAACTACGACGTTCTGATTCTTCTGCCCGGCTGAGGGCTGCCATTTCCGT
GGTCGGGTGATGATACCTTTTTTTTTTTTTTACCTTCTGGTACATAGATT
TTTGAGCAACTTCTTATTTACGCCTTCTTGCAACCCCCCTTTTTTACTCT
TCTCACGCCCTCTTTGAACTTTTTCCTTCACGTACCCTGTTGGATTGTCA
AGGGTTTCATGGACCTTTTCCGTTGCTGAAGAGTATCTTTTATGTGTCGG
AAAGAGATGTTACAGATCCCGGCTTT
back to top

Coding sequence (CDS) from alignment at ACJE01000014.1:502140..503415-

>ASPNIDRAFT_55058-T1 ID=ASPNIDRAFT_55058-T1|Name=ASPNIDRAFT_55058-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1356bp|location=Sequence derived from alignment at ACJE01000014.1:502140..503415- (Aspergillus niger ATCC 1015)
GGAACATCGACAACTCTGGTAGCTACTCTTGGACTCCTTCTGCCAAGCTT
GCAGCCCGCTCGGACTACACCATTGAGATCATCGATGATGATGACACGGA
CGATGTCAACTACACCCCGCGCTTCTCAATCTCTGGTGCTACTGGAGCGG
TGACCACCAGCACTGCCTCGTCAACCACGTCTTCCGCTTCTAGCACCAGT
TCTTCCACCGAACAGACCTCCACCGTGAGCGCCACTACTCTGTCTACTAC
CACCTCGAGCGCTAGCTCTTCCACCTCGACCACCACGGCTAGCTCGAACT
CCACCGTTTCGGCGTCGTCCTCCAAGACTGCCTCGTCCAGCTCTTCGAAC
ACCGCGAGCTCCAGCGCTTCTACCGCCAGCGTCACCACCGTCTCCACCAA
TGCCGGTATGGCCAACCAGGCCTCTATTGGCATGATGGCCCTTATCTTTG
GTGCTGTTGCGCTCATCTAAATGCGTTCCGTCTTCTACCTTGCTCTCAGC
GCCATTGCGTCTCTCGCGGCTGCTTCCGATAACCCGTTCAACAACCCCGA
GGGTGGCTACACCTTCACCGCGGGCAGCCCGACTACTCTCACCTGGGACC
CAACTACTAATGGCACGGTCACCCTGAGACTCCAGTGGGGTGCTGTTTTC
ACCACCACCTCGGGCGAACTCATTGCCGGGAACATCGACAACTCTGGTAG
CTACTCTTGGACTCCTTCTGCCAAGCTTGCAGCCCGCTCGGACTACACCA
TTGAGATCATCGATGATGATGACACGGACGATGTCAACTACACCCCGCGC
TTCTCAATCTCTGGTGCTACTGGAGCGGTGACCACCAGCACTGCCTCGTC
AACCACGTCTTCCGCTTCTAGCACCAGTTCTTCCACCGAACAGACCTCCA
CCGTGAGCGCCACTACTCTGTCTACTACCACCTCGAGCGCTAGCTCTTCC
ACCTCGACCACCACGGCTAGCTCGAACTCCACCGTTTCGGCGTCGTCCTC
CAAGACTGCCTCGTCCAGCTCTTCGAACACCGCGAGCTCCAGCGCTTCTA
CCGCCAGCGTCACCACCGTCTCCACCAATGCCGGTATGGCCAACCAGGCC
TCTATTGGCATGATGGCCCTTATCTTTGGTGCTGTTGCGCTCATCTAAAT
GCGTTCCGTCTTCTACCTTGCTCTCAGCGCCATTGCGTCTCTCGCGGCTG
CTTCCGATAACCCGTTCAACAACCCCGAGGGTGGCTACACCTTCACCGCG
GGCAGCCCGACTACTCTCACCTGGGACCCAACTACTAATGGCACGGTCAC
CCTGAGACTCCAGTGGGGTGCTGTTTTCACCACCACCTCGGGCGAACTCA
TTGCCG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_55058ASPNIDRAFT_55058Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_55058-T1ASPNIDRAFT_55058-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_55058-T1.cdsASPNIDRAFT_55058-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_55058-T1.utr3p1ASPNIDRAFT_55058-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_55058-T1.exon2ASPNIDRAFT_55058-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_55058-T1.exon1ASPNIDRAFT_55058-T1.exon1Aspergillus niger ATCC 1015exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_55058-T1.utr5p1ASPNIDRAFT_55058-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


Properties
Property NameValue
NoteEggNog:ENOG41
NoteSECRETED:SignalP(1-18)
DBxrefInterPro:IPR018466
DBxrefPFAM:PF10342
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000014.1supercontigACJE01000014.1:502140..503415 -
Powered by Drupal