You are here

Home

ASPNIDRAFT_57089-T1, ASPNIDRAFT_57089-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_57089-T1
Unique NameASPNIDRAFT_57089-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000016.1:373558..374845+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_57089-T1 ID=ASPNIDRAFT_57089-T1|Name=ASPNIDRAFT_57089-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1288bp|location=Sequence derived from alignment at ACJE01000016.1:373558..374845+ (Aspergillus niger ATCC 1015)
TAAACTCCCTTTGACCCCCCCTCTGCTGTACATAGCCGGTCACTTCCCTC
TACAGTACTTGCTTGAATTGTTTACTCCGCCCTATTGAATACTTAGCTCT
ACATTCTTGAGCTCAACTATTTGCCCAGACCATTATAATTGTCCCCGTCA
ACCAAACCACCACATATCAACGAGCTCAACTCTTCCTCGTTCTACCTCCC
ATCACATCTCCAATGGCAGCTCCTCGTTCCAGTTCGTTGCGCGCTCTCCG
CGTGCTCTCCCAGCAGCACTCTACCACCCCATCCATCCGTCGGGGCTTGC
ACATCACCGGCGCCCAGTCTGCACAACCCGCCAATGTCTCGGACAGGGCT
TCTCTGTATGCCAGCCGCACTCTGGCGGATCTGAAGAATGAATGTGTGAA
GCGGTCCTTGAGATCTAGTGGCTCCCAGTCCGAGGTATGCTATCTATGAC
ATCTACACTCCTAGTCAAACCACCTGTATGGCTAATCATTATTTTGTGTC
GCTTAGCTTGTCGAACGCCTTTCCAATCATGACTTCCTTCAGTCCCGTGC
CTTCAGCATCGCTATGAAGAGGATCAACGGCAGCTCTAGCGCTGAGTATG
TAGATCTGATCATCATGACAGCCCGTTACCTCGGGTAAAGCCAGTTCGGA
ACTAACATTCTTGCTCAACACAGGAAGAACCATGGCCGCCAATTCAACAC
TTCCCGTTCTAGCAAAGCTGTCGGTGACTCATCCACCGTTGACTTCGCTT
ACATGCCATCTATGGCAGAGATCGATGCACCTGCTGCTCGTGCCGATCCG
CAAATCCCGATCCTTTCCGACATCTATACCCACTATGACCCGACCCAGTC
GCAAGAGGCCCCCATGAGGCCCCAGGTTTATACCGTGTCCGGGGGTGCTG
GTGACATCTCCGCAAGTCCCATGACCGAGGTTGTTGACAATCACTCCGTG
GACATCGATCCCTTCTCCCTAACCGAGACGGTTGGGAAGTCCAGATTCGG
CGAGGAGCTGAAGAGGCAACAGAACGGTACCTCCGAACCAGGAGTCGTCC
GGGAACTTTGGAGTGGTTTCTTGGAAGATCTTTTAGGTTCCAAACAGCAG
CAAGCTCAGAAACACTAATGCTGCCTTCATGTTTGATTATGTCTTCTGTC
TCGTTTCTAGCGATGTGTGATGGTTACTTTTCAAAGGGCCCTTATTGCCG
TCTTTTTGTCAATGTCTTTCGGGATTGAAACATAGTTATGATCCTCTGTA
GAAGGATCTATCAAATCCATTCTGGTTTTCCCCAAGGA
back to top

Coding sequence (CDS) from alignment at ACJE01000016.1:373558..374845+

>ASPNIDRAFT_57089-T1 ID=ASPNIDRAFT_57089-T1|Name=ASPNIDRAFT_57089-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2268bp|location=Sequence derived from alignment at ACJE01000016.1:373558..374845+ (Aspergillus niger ATCC 1015)
ATGGCAGCTCCTCGTTCCAGTTCGTTGCGCGCTCTCCGCGTGCTCTCCCA
GCAGCACTCTACCACCCCATCCATCCGTCGGGGCTTGCACATCACCGGCG
CCCAGTCTGCACAACCCGCCAATGTCTCGGACAGGGCTTCTCTGTATGCC
AGCCGCACTCTGGCGGATCTGAAGAATGAATGTGTGAAGCGGTCCTTGAG
ATCTAGTGGCTCCCAGTCCGAGCTTGTCGAACGCCTTTCCAATCATGACT
TCCTTCAGTCCCGTGCCTTCAGCATCGCTATGAAGAGGATCAACGGCAGC
TCTAGCGCTGAGAAGAACCATGGCCGCCAATTCAACACTTCCCGTTCTAG
CAAAGCTGTCGGTGACTCATCCACCGTTGACTTCGCTTACATGCCATCTA
TGGCAGAGATCGATGCACCTGCTGCTCGTGCCGATCCGCAAATCCCGATC
CTTTCCGACATCTATACCCACTATGACCCGACCCAGTCGCAAGAGGCCCC
CATGAGGCCCCAGGTTTATACCGTGTCCGGGGGTGCTGGTGACATCTCCG
CAAGTCCCATGACCGAGGTTGTTGACAATCACTCCGTGGACATCGATCCC
TTCTCCCTAACCGAGACGGTTGGGAAGTCCAGATTCGGCGAGGAGCTGAA
GAGGCAACAGAACGGTACCTCCGAACCAGGAGTCGTCCGGGAACTTTGGA
GTGGTTTCTTGGAAGATCTTTTAGGTTCCAAACAGCAGCAAGCTCAGAAA
CACTAAATGGCAGCTCCTCGTTCCAGTTCGTTGCGCGCTCTCCGCGTGCT
CTCCCAGCAGCACTCTACCACCCCATCCATCCGTCGGGGCTTGCACATCA
CCGGCGCCCAGTCTGCACAACCCGCCAATGTCTCGGACAGGGCTTCTCTG
TATGCCAGCCGCACTCTGGCGGATCTGAAGAATGAATGTGTGAAGCGGTC
CTTGAGATCTAGTGGCTCCCAGTCCGAGCTTGTCGAACGCCTTTCCAATC
ATGACTTCCTTCAGTCCCGTGCCTTCAGCATCGCTATGAAGAGGATCAAC
GGCAGCTCTAGCGCTGAGAAGAACCATGGCCGCCAATTCAACACTTCCCG
TTCTAGCAAAGCTGTCGGTGACTCATCCACCGTTGACTTCGCTTACATGC
CATCTATGGCAGAGATCGATGCACCTGCTGCTCGTGCCGATCCGCAAATC
CCGATCCTTTCCGACATCTATACCCACTATGACCCGACCCAGTCGCAAGA
GGCCCCCATGAGGCCCCAGGTTTATACCGTGTCCGGGGGTGCTGGTGACA
TCTCCGCAAGTCCCATGACCGAGGTTGTTGACAATCACTCCGTGGACATC
GATCCCTTCTCCCTAACCGAGACGGTTGGGAAGTCCAGATTCGGCGAGGA
GCTGAAGAGGCAACAGAACGGTACCTCCGAACCAGGAGTCGTCCGGGAAC
TTTGGAGTGGTTTCTTGGAAGATCTTTTAGGTTCCAAACAGCAGCAAGCT
CAGAAACACTAAATGGCAGCTCCTCGTTCCAGTTCGTTGCGCGCTCTCCG
CGTGCTCTCCCAGCAGCACTCTACCACCCCATCCATCCGTCGGGGCTTGC
ACATCACCGGCGCCCAGTCTGCACAACCCGCCAATGTCTCGGACAGGGCT
TCTCTGTATGCCAGCCGCACTCTGGCGGATCTGAAGAATGAATGTGTGAA
GCGGTCCTTGAGATCTAGTGGCTCCCAGTCCGAGCTTGTCGAACGCCTTT
CCAATCATGACTTCCTTCAGTCCCGTGCCTTCAGCATCGCTATGAAGAGG
ATCAACGGCAGCTCTAGCGCTGAGAAGAACCATGGCCGCCAATTCAACAC
TTCCCGTTCTAGCAAAGCTGTCGGTGACTCATCCACCGTTGACTTCGCTT
ACATGCCATCTATGGCAGAGATCGATGCACCTGCTGCTCGTGCCGATCCG
CAAATCCCGATCCTTTCCGACATCTATACCCACTATGACCCGACCCAGTC
GCAAGAGGCCCCCATGAGGCCCCAGGTTTATACCGTGTCCGGGGGTGCTG
GTGACATCTCCGCAAGTCCCATGACCGAGGTTGTTGACAATCACTCCGTG
GACATCGATCCCTTCTCCCTAACCGAGACGGTTGGGAAGTCCAGATTCGG
CGAGGAGCTGAAGAGGCAACAGAACGGTACCTCCGAACCAGGAGTCGTCC
GGGAACTTTGGAGTGGTTTCTTGGAAGATCTTTTAGGTTCCAAACAGCAG
CAAGCTCAGAAACACTAA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_57089ASPNIDRAFT_57089Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_57089-T1ASPNIDRAFT_57089-T1-proteinAspergillus niger ATCC 1015polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_57089-T1.utr5p1ASPNIDRAFT_57089-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_57089-T1.exon1ASPNIDRAFT_57089-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_57089-T1.exon2ASPNIDRAFT_57089-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_57089-T1.exon3ASPNIDRAFT_57089-T1.exon3Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_57089-T1.cdsASPNIDRAFT_57089-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_57089-T1.utr3p1ASPNIDRAFT_57089-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036361
DBxrefInterPro:IPR003034
DBxrefPFAM:PF02037
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000016.1supercontigACJE01000016.1:373558..374845 +
Powered by Drupal