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ASPNIDRAFT_54997-T1, ASPNIDRAFT_54997-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_54997-T1
Unique NameASPNIDRAFT_54997-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000016.1:1528204..1530075-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_54997-T1 ID=ASPNIDRAFT_54997-T1|Name=ASPNIDRAFT_54997-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1872bp|location=Sequence derived from alignment at ACJE01000016.1:1528204..1530075- (Aspergillus niger ATCC 1015)
CACTTCTGCAACCCCGTTCTCCCTTCTATTTGGCATTGGATTGGAGTGTT
CCGTCTTGTTCAGGCCATATTCCCGAAACAAATCAGGGAATAATCAGCCA
TTCACTGTGAGACTGCCGGCTCCTGTCCTATATTGGAGTTTCTGACACTG
ATTGGAGCCAATCAACTATCTTCCAAACCAGCCAGAATCATTATAAGCTG
GCTATCTGCAAGGCCTAGTGAAGGCTTACATCTGCCACATCACTTGTCTG
CTTGTGTGCGCATATTTGCTATTTTATTCGCCTGCTTCAGTCCCTGATCA
CCTCAGTGCACGTGCTTTGCAGAGGCAAATTTGACTTGACGGGACTTGAA
ATACCTGTCTCACCAGGCTACTCTGTGTCTTTGCTTGATTCTTCTCGCGC
CCAGACTGGTGAAACCTGTGACTGGTGATTTGATTTGCTTTAACAGCATC
CTACCCCTCAGTGACAGCAGACACCCCTTGATCTGTCTACGCACCACTTC
ATCTCAAAATGGCTCCAACAAGCCAAATGACCTACCAGAAGGATGAAAGG
GTTCTCTGTTTCCACCATGAGATCCTGTACGAGGCCAAGATCCTTGACCT
GAGGCATACGGACCCAGAGGACCGTAAGAGTCCCTACGAGTACTTAGTCC
ACTACAAGGGCTGGAAGAATACGTACGTCTAACCTAGTGCAACCCTCCCA
TCATCCTACCACAATTCTCTACCTTCTGACTTGGGATGGGATCGTAATTC
TACTCTAACTGGCAGAAGGATGTGGTTCGCGCATCCTCTCCTTCTGCCGG
TGAAGCCACCATCACAGCGGAACGGAGAGGTGTCCTTGTCTGAGCCACAT
TTGCTGACGCTTGCTTTGTCTATTCAGCTGGGATGACTGGGTTCCCCAAG
ACCGCCTTCGTAAATTTACGGAGGAGAATAGAGAATTAGCCACCACTCTT
CGTCGTGAGGCAGAGGCTGCATTCCGTCAGAAGAGCACCAAAGCCTCTGT
CAAGAAGAGGGGAGGCTCCGACCGCAGTTCCGCCCGAGGCAGCGAGGAAA
GGCAAACCTCAGTGCCTGGCCGCGGAACCAAGAGGGCCCGTGACAACGAT
ATCGAAAAGGTAAGTCTGCTGCATTTTTGCTTTCAATATTCCCTGTAGCC
TGTCACACCGCCAGTGACGGTGCGCACAAGGGGCAGTATTGTTGATCACA
CATATTAACCGTGTCATCACAGGAGGAGAGCTTTTATGTGCGGCCTTCAG
TAAGGATCGTAATGCCAGACAATTTGAAGTCTCTCCTAGTAGACGATTGG
GAAAACGTCACTAAGAACCAGCAAGTCGTGGCCTTGCCTGCCAAGTCCCC
GGTCAATCAGATTCTGGACGACTACGTCAATGAGGAGAAGCCCAAACGCA
CAAGCTCGGCTGATACGGATGTCCTTGAAGAAGTCGTTATGGGTGTACGC
GAATACTTCGACAAAGCACTTGACAAGGTCCTCTTATACCGGTTTGAACG
CGAACAGTACCGGGCTCTCCGCAAAAAGTGGGAGGCAGGTTCGGGTGACT
ACGCCGACAAGGGACCACTTGACATCTACGGTGCAGAGCATCTGACTCGC
CTTTTCGGTAGGTTTCTTTGTTTCAAACTACTACATACGTCGCTAACGGA
TACTTCATAGCAACCATGCCCGAGCTGATTGCACAGACAAATATGGACCT
CCAGTCGACGAATAGACTCCGGGAAGAACTGTCCAAGTTCACCATCTGGC
TGAGCAAAAACTCTAGCAGATACTTCGCTACGAGATACATGACTGCGAGC
AATGAATACATTGAAAAGTCGCGCGGCGTTCCAAACCCGACTCCTGGGAC
CGCGACATCGCGTTTAGTCTAG
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Coding sequence (CDS) from alignment at ACJE01000016.1:1528204..1530075-

>ASPNIDRAFT_54997-T1 ID=ASPNIDRAFT_54997-T1|Name=ASPNIDRAFT_54997-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=3972bp|location=Sequence derived from alignment at ACJE01000016.1:1528204..1530075- (Aspergillus niger ATCC 1015)
CAACCATGCCCGAGCTGATTGCACAGACAAATATGGACCTCCAGTCGACG
AATAGACTCCGGGAAGAACTGTCCAAGTTCACCATCTGGCTGAGCAAAAA
CTCTAGCAGATACTTCGCTACGAGATACATGACTGCGAGCAATGAATACA
TTGAAAAGTCGCGCGGCGTTCCAAACCCGACTCCTGGGACCGCGACATCG
CGTTTAGTCTAGGAGGAGAGCTTTTATGTGCGGCCTTCAGTAAGGATCGT
AATGCCAGACAATTTGAAGTCTCTCCTAGTAGACGATTGGGAAAACGTCA
CTAAGAACCAGCAAGTCGTGGCCTTGCCTGCCAAGTCCCCGGTCAATCAG
ATTCTGGACGACTACGTCAATGAGGAGAAGCCCAAACGCACAAGCTCGGC
TGATACGGATGTCCTTGAAGAAGTCGTTATGGGTGTACGCGAATACTTCG
ACAAAGCACTTGACAAGGTCCTCTTATACCGGTTTGAACGCGAACAGTAC
CGGGCTCTCCGCAAAAAGTGGGAGGCAGGTTCGGGTGACTACGCCGACAA
GGGACCACTTGACATCTACGGTGCAGAGCATCTGACTCGCCTTTTCGCTG
GGATGACTGGGTTCCCCAAGACCGCCTTCGTAAATTTACGGAGGAGAATA
GAGAATTAGCCACCACTCTTCGTCGTGAGGCAGAGGCTGCATTCCGTCAG
AAGAGCACCAAAGCCTCTGTCAAGAAGAGGGGAGGCTCCGACCGCAGTTC
CGCCCGAGGCAGCGAGGAAAGGCAAACCTCAGTGCCTGGCCGCGGAACCA
AGAGGGCCCGTGACAACGATATCGAAAAGATGGCTCCAACAAGCCAAATG
ACCTACCAGAAGGATGAAAGGGTTCTCTGTTTCCACCATGAGATCCTGTA
CGAGGCCAAGATCCTTGACCTGAGGCATACGGACCCAGAGGACCGTAAGA
GTCCCTACGAGTACTTAGTCCACTACAAGGGCTGGAAGAATACCAACCAT
GCCCGAGCTGATTGCACAGACAAATATGGACCTCCAGTCGACGAATAGAC
TCCGGGAAGAACTGTCCAAGTTCACCATCTGGCTGAGCAAAAACTCTAGC
AGATACTTCGCTACGAGATACATGACTGCGAGCAATGAATACATTGAAAA
GTCGCGCGGCGTTCCAAACCCGACTCCTGGGACCGCGACATCGCGTTTAG
TCTAGGAGGAGAGCTTTTATGTGCGGCCTTCAGTAAGGATCGTAATGCCA
GACAATTTGAAGTCTCTCCTAGTAGACGATTGGGAAAACGTCACTAAGAA
CCAGCAAGTCGTGGCCTTGCCTGCCAAGTCCCCGGTCAATCAGATTCTGG
ACGACTACGTCAATGAGGAGAAGCCCAAACGCACAAGCTCGGCTGATACG
GATGTCCTTGAAGAAGTCGTTATGGGTGTACGCGAATACTTCGACAAAGC
ACTTGACAAGGTCCTCTTATACCGGTTTGAACGCGAACAGTACCGGGCTC
TCCGCAAAAAGTGGGAGGCAGGTTCGGGTGACTACGCCGACAAGGGACCA
CTTGACATCTACGGTGCAGAGCATCTGACTCGCCTTTTCGCTGGGATGAC
TGGGTTCCCCAAGACCGCCTTCGTAAATTTACGGAGGAGAATAGAGAATT
AGCCACCACTCTTCGTCGTGAGGCAGAGGCTGCATTCCGTCAGAAGAGCA
CCAAAGCCTCTGTCAAGAAGAGGGGAGGCTCCGACCGCAGTTCCGCCCGA
GGCAGCGAGGAAAGGCAAACCTCAGTGCCTGGCCGCGGAACCAAGAGGGC
CCGTGACAACGATATCGAAAAGATGGCTCCAACAAGCCAAATGACCTACC
AGAAGGATGAAAGGGTTCTCTGTTTCCACCATGAGATCCTGTACGAGGCC
AAGATCCTTGACCTGAGGCATACGGACCCAGAGGACCGTAAGAGTCCCTA
CGAGTACTTAGTCCACTACAAGGGCTGGAAGAATACCAACCATGCCCGAG
CTGATTGCACAGACAAATATGGACCTCCAGTCGACGAATAGACTCCGGGA
AGAACTGTCCAAGTTCACCATCTGGCTGAGCAAAAACTCTAGCAGATACT
TCGCTACGAGATACATGACTGCGAGCAATGAATACATTGAAAAGTCGCGC
GGCGTTCCAAACCCGACTCCTGGGACCGCGACATCGCGTTTAGTCTAGGA
GGAGAGCTTTTATGTGCGGCCTTCAGTAAGGATCGTAATGCCAGACAATT
TGAAGTCTCTCCTAGTAGACGATTGGGAAAACGTCACTAAGAACCAGCAA
GTCGTGGCCTTGCCTGCCAAGTCCCCGGTCAATCAGATTCTGGACGACTA
CGTCAATGAGGAGAAGCCCAAACGCACAAGCTCGGCTGATACGGATGTCC
TTGAAGAAGTCGTTATGGGTGTACGCGAATACTTCGACAAAGCACTTGAC
AAGGTCCTCTTATACCGGTTTGAACGCGAACAGTACCGGGCTCTCCGCAA
AAAGTGGGAGGCAGGTTCGGGTGACTACGCCGACAAGGGACCACTTGACA
TCTACGGTGCAGAGCATCTGACTCGCCTTTTCGCTGGGATGACTGGGTTC
CCCAAGACCGCCTTCGTAAATTTACGGAGGAGAATAGAGAATTAGCCACC
ACTCTTCGTCGTGAGGCAGAGGCTGCATTCCGTCAGAAGAGCACCAAAGC
CTCTGTCAAGAAGAGGGGAGGCTCCGACCGCAGTTCCGCCCGAGGCAGCG
AGGAAAGGCAAACCTCAGTGCCTGGCCGCGGAACCAAGAGGGCCCGTGAC
AACGATATCGAAAAGATGGCTCCAACAAGCCAAATGACCTACCAGAAGGA
TGAAAGGGTTCTCTGTTTCCACCATGAGATCCTGTACGAGGCCAAGATCC
TTGACCTGAGGCATACGGACCCAGAGGACCGTAAGAGTCCCTACGAGTAC
TTAGTCCACTACAAGGGCTGGAAGAATACCAACCATGCCCGAGCTGATTG
CACAGACAAATATGGACCTCCAGTCGACGAATAGACTCCGGGAAGAACTG
TCCAAGTTCACCATCTGGCTGAGCAAAAACTCTAGCAGATACTTCGCTAC
GAGATACATGACTGCGAGCAATGAATACATTGAAAAGTCGCGCGGCGTTC
CAAACCCGACTCCTGGGACCGCGACATCGCGTTTAGTCTAGGAGGAGAGC
TTTTATGTGCGGCCTTCAGTAAGGATCGTAATGCCAGACAATTTGAAGTC
TCTCCTAGTAGACGATTGGGAAAACGTCACTAAGAACCAGCAAGTCGTGG
CCTTGCCTGCCAAGTCCCCGGTCAATCAGATTCTGGACGACTACGTCAAT
GAGGAGAAGCCCAAACGCACAAGCTCGGCTGATACGGATGTCCTTGAAGA
AGTCGTTATGGGTGTACGCGAATACTTCGACAAAGCACTTGACAAGGTCC
TCTTATACCGGTTTGAACGCGAACAGTACCGGGCTCTCCGCAAAAAGTGG
GAGGCAGGTTCGGGTGACTACGCCGACAAGGGACCACTTGACATCTACGG
TGCAGAGCATCTGACTCGCCTTTTCGCTGGGATGACTGGGTTCCCCAAGA
CCGCCTTCGTAAATTTACGGAGGAGAATAGAGAATTAGCCACCACTCTTC
GTCGTGAGGCAGAGGCTGCATTCCGTCAGAAGAGCACCAAAGCCTCTGTC
AAGAAGAGGGGAGGCTCCGACCGCAGTTCCGCCCGAGGCAGCGAGGAAAG
GCAAACCTCAGTGCCTGGCCGCGGAACCAAGAGGGCCCGTGACAACGATA
TCGAAAAGATGGCTCCAACAAGCCAAATGACCTACCAGAAGGATGAAAGG
GTTCTCTGTTTCCACCATGAGATCCTGTACGAGGCCAAGATCCTTGACCT
GAGGCATACGGACCCAGAGGACCGTAAGAGTCCCTACGAGTACTTAGTCC
ACTACAAGGGCTGGAAGAATAC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO:0006325chromatin organization
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EAF3ASPNIDRAFT_54997Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_54997-T1ASPNIDRAFT_54997-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_54997-T1.cdsASPNIDRAFT_54997-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_54997-T1.exon5ASPNIDRAFT_54997-T1.exon5Aspergillus niger ATCC 1015exon
ASPNIDRAFT_54997-T1.exon4ASPNIDRAFT_54997-T1.exon4Aspergillus niger ATCC 1015exon
ASPNIDRAFT_54997-T1.exon3ASPNIDRAFT_54997-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_54997-T1.exon2ASPNIDRAFT_54997-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_54997-T1.exon1ASPNIDRAFT_54997-T1.exon1Aspergillus niger ATCC 1015exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_54997-T1.utr5p2ASPNIDRAFT_54997-T1.utr5p2Aspergillus niger ATCC 1015five_prime_UTR
ASPNIDRAFT_54997-T1.utr5p1ASPNIDRAFT_54997-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR016197
DBxrefInterPro:IPR026541
DBxrefInterPro:IPR025995
DBxrefInterPro:IPR038217
DBxrefInterPro:IPR008676
DBxrefInterPro:IPR000953
DBxrefPFAM:PF11717
DBxrefPFAM:PF05712
ProductEsa1p-associated factor
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000016.1supercontigACJE01000016.1:1528204..1530075 -
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