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Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000016.1:1815451..1816586- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_54960-T1 ID=ASPNIDRAFT_54960-T1|Name=ASPNIDRAFT_54960-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1136bp|location=Sequence derived from alignment at ACJE01000016.1:1815451..1816586- (Aspergillus niger ATCC 1015)
CCCCTATACTCAAGGTTTTCAAATTAGCCAACTATCCTTACAAGACTATC
TCAACGGTCTTCTTTCGGGGCCTTACTCATCACTCCTATCTATTTGCAGC
ATGCCTGCCGAGCAGTCTGCGGCCAGCCCTTCTGGCGCCAAGGAAATCTC
CAAGCCGTCCGCAGAGAATGACCAAGCCGGCGATGATCGCAACGAACCTA
CATCGCCTTCAAAAGAGAAGACGAAGGGAAAATCAGGTGAAGAGGCTAGC
GTGGATGAGGCCAGTACGGACCAAAAAGACGATGATGCTGCTTCGAGAGC
CCGCCAACGACAAGAAAGGTTCAAGGCTCTCCAGGCTCGCGCAGTAAGTT
CATGATAGCGAAGATTCATTGTGCGCTGTGTTCATACTGACATAGTTTTA
GAAAACTGCTACCGAGCGGAATCTGAAAGAAACGGCTGCCGAAACACAGC
GTCTCGCAACCGATCCGTCGCTGCTTTCCTCGCTCTCTCGCAAACATGCT
TTCGCATCGCATAACCTTCTCAAGGCTGACACAGAAGCCGCTGGCGAGGA
CTTCGAACGTAAGCGTGCATGGGACTGGACTGTCGATGAGTCCGAAAAAT
GGGACAAGCGCATGGAAAAGAAGCAGCGTCATCGGGACAATGTCGCATTC
CAGGACTACACCCAAGACGCGCGAAAAGTGTATAAGAGACAGCTGCGGGA
AGTACAGCCTGACCTTGAAACCTACGAGAGGGAGAAGATGGCAGCGATCG
AAAAGGCTGCTGCCAATGGCGATCTCGAGATCGTTGAGACCAACGACGGT
GAAATGATCGCCGTCGATAAGAACGGCTCTTTCTACTCTACAGCTGACAG
TGTTGGCTTTACGGAGAACAAGCCCGACAGAGCTGCTGTTGACAAGCTCG
TGGATAATCTTCGGAAAGCCGAGGAAGTCCGACTCAAGAAGCGGAGGGAC
CGCCGCGGAGACGATGACGGCGACGTCACTTACATCAACGAAAAGAACAA
GCAGTTCAACCAGAAATTATCAAGATTCTACAATAAGGTGAGTTTTCACT
CTGCCATTTGTCAAAGGGGCTAGCTAATTGTTTTCCAGTACACTACGGAG
ATTCGCGACAGCTTCGAGCGTGGTACGATGATCTGA back to topCoding sequence (CDS) from alignment at ACJE01000016.1:1815451..1816586- >ASPNIDRAFT_54960-T1 ID=ASPNIDRAFT_54960-T1|Name=ASPNIDRAFT_54960-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2781bp|location=Sequence derived from alignment at ACJE01000016.1:1815451..1816586- (Aspergillus niger ATCC 1015)
TACACTACGGAGATTCGCGACAGCTTCGAGCGTGGTACGATGATCTGAAA
AACTGCTACCGAGCGGAATCTGAAAGAAACGGCTGCCGAAACACAGCGTC
TCGCAACCGATCCGTCGCTGCTTTCCTCGCTCTCTCGCAAACATGCTTTC
GCATCGCATAACCTTCTCAAGGCTGACACAGAAGCCGCTGGCGAGGACTT
CGAACGTAAGCGTGCATGGGACTGGACTGTCGATGAGTCCGAAAAATGGG
ACAAGCGCATGGAAAAGAAGCAGCGTCATCGGGACAATGTCGCATTCCAG
GACTACACCCAAGACGCGCGAAAAGTGTATAAGAGACAGCTGCGGGAAGT
ACAGCCTGACCTTGAAACCTACGAGAGGGAGAAGATGGCAGCGATCGAAA
AGGCTGCTGCCAATGGCGATCTCGAGATCGTTGAGACCAACGACGGTGAA
ATGATCGCCGTCGATAAGAACGGCTCTTTCTACTCTACAGCTGACAGTGT
TGGCTTTACGGAGAACAAGCCCGACAGAGCTGCTGTTGACAAGCTCGTGG
ATAATCTTCGGAAAGCCGAGGAAGTCCGACTCAAGAAGCGGAGGGACCGC
CGCGGAGACGATGACGGCGACGTCACTTACATCAACGAAAAGAACAAGCA
GTTCAACCAGAAATTATCAAGATTCTACAATAAGATGCCTGCCGAGCAGT
CTGCGGCCAGCCCTTCTGGCGCCAAGGAAATCTCCAAGCCGTCCGCAGAG
AATGACCAAGCCGGCGATGATCGCAACGAACCTACATCGCCTTCAAAAGA
GAAGACGAAGGGAAAATCAGGTGAAGAGGCTAGCGTGGATGAGGCCAGTA
CGGACCAAAAAGACGATGATGCTGCTTCGAGAGCCCGCCAACGACAAGAA
AGGTTCAAGGCTCTCCAGGCTCGCGCATACACTACGGAGATTCGCGACAG
CTTCGAGCGTGGTACGATGATCTGAAAAACTGCTACCGAGCGGAATCTGA
AAGAAACGGCTGCCGAAACACAGCGTCTCGCAACCGATCCGTCGCTGCTT
TCCTCGCTCTCTCGCAAACATGCTTTCGCATCGCATAACCTTCTCAAGGC
TGACACAGAAGCCGCTGGCGAGGACTTCGAACGTAAGCGTGCATGGGACT
GGACTGTCGATGAGTCCGAAAAATGGGACAAGCGCATGGAAAAGAAGCAG
CGTCATCGGGACAATGTCGCATTCCAGGACTACACCCAAGACGCGCGAAA
AGTGTATAAGAGACAGCTGCGGGAAGTACAGCCTGACCTTGAAACCTACG
AGAGGGAGAAGATGGCAGCGATCGAAAAGGCTGCTGCCAATGGCGATCTC
GAGATCGTTGAGACCAACGACGGTGAAATGATCGCCGTCGATAAGAACGG
CTCTTTCTACTCTACAGCTGACAGTGTTGGCTTTACGGAGAACAAGCCCG
ACAGAGCTGCTGTTGACAAGCTCGTGGATAATCTTCGGAAAGCCGAGGAA
GTCCGACTCAAGAAGCGGAGGGACCGCCGCGGAGACGATGACGGCGACGT
CACTTACATCAACGAAAAGAACAAGCAGTTCAACCAGAAATTATCAAGAT
TCTACAATAAGATGCCTGCCGAGCAGTCTGCGGCCAGCCCTTCTGGCGCC
AAGGAAATCTCCAAGCCGTCCGCAGAGAATGACCAAGCCGGCGATGATCG
CAACGAACCTACATCGCCTTCAAAAGAGAAGACGAAGGGAAAATCAGGTG
AAGAGGCTAGCGTGGATGAGGCCAGTACGGACCAAAAAGACGATGATGCT
GCTTCGAGAGCCCGCCAACGACAAGAAAGGTTCAAGGCTCTCCAGGCTCG
CGCATACACTACGGAGATTCGCGACAGCTTCGAGCGTGGTACGATGATCT
GAAAAACTGCTACCGAGCGGAATCTGAAAGAAACGGCTGCCGAAACACAG
CGTCTCGCAACCGATCCGTCGCTGCTTTCCTCGCTCTCTCGCAAACATGC
TTTCGCATCGCATAACCTTCTCAAGGCTGACACAGAAGCCGCTGGCGAGG
ACTTCGAACGTAAGCGTGCATGGGACTGGACTGTCGATGAGTCCGAAAAA
TGGGACAAGCGCATGGAAAAGAAGCAGCGTCATCGGGACAATGTCGCATT
CCAGGACTACACCCAAGACGCGCGAAAAGTGTATAAGAGACAGCTGCGGG
AAGTACAGCCTGACCTTGAAACCTACGAGAGGGAGAAGATGGCAGCGATC
GAAAAGGCTGCTGCCAATGGCGATCTCGAGATCGTTGAGACCAACGACGG
TGAAATGATCGCCGTCGATAAGAACGGCTCTTTCTACTCTACAGCTGACA
GTGTTGGCTTTACGGAGAACAAGCCCGACAGAGCTGCTGTTGACAAGCTC
GTGGATAATCTTCGGAAAGCCGAGGAAGTCCGACTCAAGAAGCGGAGGGA
CCGCCGCGGAGACGATGACGGCGACGTCACTTACATCAACGAAAAGAACA
AGCAGTTCAACCAGAAATTATCAAGATTCTACAATAAGATGCCTGCCGAG
CAGTCTGCGGCCAGCCCTTCTGGCGCCAAGGAAATCTCCAAGCCGTCCGC
AGAGAATGACCAAGCCGGCGATGATCGCAACGAACCTACATCGCCTTCAA
AAGAGAAGACGAAGGGAAAATCAGGTGAAGAGGCTAGCGTGGATGAGGCC
AGTACGGACCAAAAAGACGATGATGCTGCTTCGAGAGCCCGCCAACGACA
AGAAAGGTTCAAGGCTCTCCAGGCTCGCGCA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR013260 |
| DBxref | PFAM:PF08231 |
| Product | pre-mRNA-splicing factor syf2 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ACJE01000016.1 | supercontig | ACJE01000016.1:1815451..1816586 - |
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