You are here

Home

ASPNIDRAFT_179682-T1, ASPNIDRAFT_179682-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_179682-T1
Unique NameASPNIDRAFT_179682-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000019.1:830129..831111+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_179682-T1 ID=ASPNIDRAFT_179682-T1|Name=ASPNIDRAFT_179682-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=983bp|location=Sequence derived from alignment at ACJE01000019.1:830129..831111+ (Aspergillus niger ATCC 1015)
ATGAAACACCACAACTACTACCCATCCACCTGCCTTTCCATCCTCCCCTT
CCTACTTCCACTCACCATGTCGCACCCCCAACAGAATCTCCTCGCCACCA
CAACCTCCAACACCAAAGCAGGCAATCCCGTCTTCCCCGGCTGGTACGCC
GACCCCGAAGCACGCCTCTTCAACGCCCAGTACTGGATCTACCCAACCTA
CTCAGCCGACTACAGCGAACAAACCTTCTTCGATGCCTTCAGCTCCCCCG
ATCTACTCACTTGGACCAAGCACCCCACCATCCTAAACATCACTAATATC
CCTTGGTCAACGAACCGTGCCGCTTGGGCCCCGTCCGTGGGCCGGAAACT
CCGCTCCTCCGCCAACGCCGAAGAAGAATATGACTACTTCATGTATTTCT
CCGTTGGTGATGGAACTGGCATCGGTGTTGCGAAATCGACCACGGGGAAA
CCTGAGGGTCCCTATGAAGACGTCCTCGGTGAACCTCTAGTTAATGGCAC
AGTGTATGGGGCGGAGGCCATTGATGCCCAGATATTTCAAGATGATGATG
GCCGGAATTGGTTGTATTTTGGGGGTTGGAGTCATGCAGTTGTTGTGGAA
TTGGGCGAGGATATGATTAGTCTGAAGGGGGATTATTTGGAGATTACCCC
GGAGGGGTATGTGGAAGGCCCGTGGATGTTAAAGAGGAATGGGATTTATT
ATTATATGTTTTCGGTTGGGGGGTAAGTTTATCTCTGCAGATTTCTGTGT
GTTTGAAGAAACAGGCACGGTTCTCGTGGAGATGCTAACACAGCTTGTGT
GGGAACAGATGGGGCGATAATTCATACGGAGTCAGTTATGTCACGGCTGA
TTCGCCGACGGGGCCGTTCTCGAGTACACCAAAGAAGATTCTACAAGGGA
ATGATGCCGTTGGCACGAGTACTGGGCACAATAGTGTGTTTACGCCGGAT
GGACAAGATTACTATATTGTCTATCATCGTCGA
back to top

Coding sequence (CDS) from alignment at ACJE01000019.1:830129..831111+

>ASPNIDRAFT_179682-T1 ID=ASPNIDRAFT_179682-T1|Name=ASPNIDRAFT_179682-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1690bp|location=Sequence derived from alignment at ACJE01000019.1:830129..831111+ (Aspergillus niger ATCC 1015)
ATGAAACACCACAACTACTACCCATCCACCTGCCTTTCCATCCTCCCCTT
CCTACTTCCACTCACCATGTCGCACCCCCAACAGAATCTCCTCGCCACCA
CAACCTCCAACACCAAAGCAGGCAATCCCGTCTTCCCCGGCTGGTACGCC
GACCCCGAAGCACGCCTCTTCAACGCCCAGTACTGGATCTACCCAACCTA
CTCAGCCGACTACAGCGAACAAACCTTCTTCGATGCCTTCAGCTCCCCCG
ATCTACTCACTTGGACCAAGCACCCCACCATCCTAAACATCACTAATATC
CCTTGGTCAACGAACCGTGCCGCTTGGGCCCCGTCCGTGGGCCGGAAACT
CCGCTCCTCCGCCAACGCCGAAGAAGAATATGACTACTTCATGTATTTCT
CCGTTGGTGATGGAACTGGCATCGGTGTTGCGAAATCGACCACGGGGAAA
CCTGAGGGTCCCTATGAAGACGTCCTCGGTGAACCTCTAGTTAATGGCAC
AGTGTATGGGGCGGAGGCCATTGATGCCCAGATATTTCAAGATGATGATG
GCCGGAATTGGTTGTATTTTGGGGGTTGGAGTCATGCAGTTGTTGTGGAA
TTGGGCGAGGATATGATTAGTCTGAAGGGGGATTATTTGGAGATTACCCC
GGAGGGGTATGTGGAAGGCCCATGGGGCGATAATTCATACGGAGTCAGTT
ATGTCACGGCTGATTCGCCGACGGGGCCGTTCTCGAGTACACCAAAGAAG
ATTCTACAAGGGAATGATGCCGTTGGCACGAGTACTGGGCACAATAGTGT
GTTTACGCCGGATGGACAAGATTACTATATTGTCTATCATCGTCGATGAA
ACACCACAACTACTACCCATCCACCTGCCTTTCCATCCTCCCCTTCCTAC
TTCCACTCACCATGTCGCACCCCCAACAGAATCTCCTCGCCACCACAACC
TCCAACACCAAAGCAGGCAATCCCGTCTTCCCCGGCTGGTACGCCGACCC
CGAAGCACGCCTCTTCAACGCCCAGTACTGGATCTACCCAACCTACTCAG
CCGACTACAGCGAACAAACCTTCTTCGATGCCTTCAGCTCCCCCGATCTA
CTCACTTGGACCAAGCACCCCACCATCCTAAACATCACTAATATCCCTTG
GTCAACGAACCGTGCCGCTTGGGCCCCGTCCGTGGGCCGGAAACTCCGCT
CCTCCGCCAACGCCGAAGAAGAATATGACTACTTCATGTATTTCTCCGTT
GGTGATGGAACTGGCATCGGTGTTGCGAAATCGACCACGGGGAAACCTGA
GGGTCCCTATGAAGACGTCCTCGGTGAACCTCTAGTTAATGGCACAGTGT
ATGGGGCGGAGGCCATTGATGCCCAGATATTTCAAGATGATGATGGCCGG
AATTGGTTGTATTTTGGGGGTTGGAGTCATGCAGTTGTTGTGGAATTGGG
CGAGGATATGATTAGTCTGAAGGGGGATTATTTGGAGATTACCCCGGAGG
GGTATGTGGAAGGCCCATGGGGCGATAATTCATACGGAGTCAGTTATGTC
ACGGCTGATTCGCCGACGGGGCCGTTCTCGAGTACACCAAAGAAGATTCT
ACAAGGGAATGATGCCGTTGGCACGAGTACTGGGCACAATAGTGTGTTTA
CGCCGGATGGACAAGATTACTATATTGTCTATCATCGTCG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_179682ASPNIDRAFT_179682Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_179682-T1.exon1ASPNIDRAFT_179682-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_179682-T1.exon2ASPNIDRAFT_179682-T1.exon2Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_179682-T1.cdsASPNIDRAFT_179682-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_179682-T1ASPNIDRAFT_179682-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
NoteSECRETED:SignalP(1-24)
NoteCAZy:GH43_1
NoteCAZy:GH43_31
NoteCAZy:GH43_29
NoteCAZy:GH43_30
NoteCAZy:GH43_3
NoteCAZy:GH43_34
NoteCAZy:GH43
DBxrefInterPro:IPR006710
DBxrefInterPro:IPR023296
DBxrefPFAM:PF04616
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000019.1supercontigACJE01000019.1:830129..831111 +
Powered by Drupal