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Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000019.1:2309819..2310425+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_56042-T1 ID=ASPNIDRAFT_56042-T1|Name=ASPNIDRAFT_56042-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=607bp|location=Sequence derived from alignment at ACJE01000019.1:2309819..2310425+ (Aspergillus niger ATCC 1015)
ATGCAAGCCGTCCCGGAATCCCGCCAACAAACCTTCGAGGAGATCTACGG
TCCTCCCGAAAACTTCCTCGAGATAGAAGTACCAACCCCCCTCCTCCCCC
AATACCCTCCCTCCCCCTTCCACCCAACCCCCTTAAACTAACATCCACCC
CCCTAAAAAACCGCAGGTTAGGAATCCCCAAACGCACGGCACCTCGCGCA
ACATGTACACCTCGTACGAAATCGTCTGCCGGACAAACATCCCCGCATTC
AAACTCAAACATTCCGTCGTGCGCCGCCGATACTCCGACTTCGAGTACTT
CCGGGATATACTGGAGCGGGAATCGACGAGGGTCACGATCCCGCCGTTAC
CGGGGAAGGTGTTTACGAATCGGTTCTCTGATGATGTGATTGAGCATAGA
CGGGAGGGGTTGCAGCGGTTTTTGCAGATTGTCGCCGGTCATCCGCTTTT
GCAGACGGGGAGTAAGGTTTTGGCCAGTTTTGTGCAGGGTATGTTTTTCT
CTTTCAGAACTTTTCTTGGTTGTTCTTTTGGGGGTGGGGTGGGGTGAATG
TGCTAACGCTAATGGGGTTTTTGTGTAGATCCGAATTGGGATCGGAATGC
GTGGTAA back to topCoding sequence (CDS) from alignment at ACJE01000019.1:2309819..2310425+ >ASPNIDRAFT_56042-T1 ID=ASPNIDRAFT_56042-T1|Name=ASPNIDRAFT_56042-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1287bp|location=Sequence derived from alignment at ACJE01000019.1:2309819..2310425+ (Aspergillus niger ATCC 1015)
ATGCAAGCCGTCCCGGAATCCCGCCAACAAACCTTCGAGGAGATCTACGG
TCCTCCCGAAAACTTCCTCGAGATAGAAGTTAGGAATCCCCAAACGCACG
GCACCTCGCGCAACATGTACACCTCGTACGAAATCGTCTGCCGGACAAAC
ATCCCCGCATTCAAACTCAAACATTCCGTCGTGCGCCGCCGATACTCCGA
CTTCGAGTACTTCCGGGATATACTGGAGCGGGAATCGACGAGGGTCACGA
TCCCGCCGTTACCGGGGAAGGTGTTTACGAATCGGTTCTCTGATGATGTG
ATTGAGCATAGACGGGAGGGGTTGCAGCGGTTTTTGCAGATTGTCGCCGG
TCATCCGCTTTTGCAGACGGGGAGTAAGGTTTTGGCCAGTTTTGTGCAGG
ATCCGAATTGGGATCGGAATGCGTGGTAAATGCAAGCCGTCCCGGAATCC
CGCCAACAAACCTTCGAGGAGATCTACGGTCCTCCCGAAAACTTCCTCGA
GATAGAAGTTAGGAATCCCCAAACGCACGGCACCTCGCGCAACATGTACA
CCTCGTACGAAATCGTCTGCCGGACAAACATCCCCGCATTCAAACTCAAA
CATTCCGTCGTGCGCCGCCGATACTCCGACTTCGAGTACTTCCGGGATAT
ACTGGAGCGGGAATCGACGAGGGTCACGATCCCGCCGTTACCGGGGAAGG
TGTTTACGAATCGGTTCTCTGATGATGTGATTGAGCATAGACGGGAGGGG
TTGCAGCGGTTTTTGCAGATTGTCGCCGGTCATCCGCTTTTGCAGACGGG
GAGTAAGGTTTTGGCCAGTTTTGTGCAGGATCCGAATTGGGATCGGAATG
CGTGGTAAATGCAAGCCGTCCCGGAATCCCGCCAACAAACCTTCGAGGAG
ATCTACGGTCCTCCCGAAAACTTCCTCGAGATAGAAGTTAGGAATCCCCA
AACGCACGGCACCTCGCGCAACATGTACACCTCGTACGAAATCGTCTGCC
GGACAAACATCCCCGCATTCAAACTCAAACATTCCGTCGTGCGCCGCCGA
TACTCCGACTTCGAGTACTTCCGGGATATACTGGAGCGGGAATCGACGAG
GGTCACGATCCCGCCGTTACCGGGGAAGGTGTTTACGAATCGGTTCTCTG
ATGATGTGATTGAGCATAGACGGGAGGGGTTGCAGCGGTTTTTGCAGATT
GTCGCCGGTCATCCGCTTTTGCAGACGGGGAGTAAGGTTTTGGCCAGTTT
TGTGCAGGATCCGAATTGGGATCGGAATGCGTGGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0032266 | phosphatidylinositol-3-phosphate binding |
| GO:0035091 | phosphatidylinositol binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR042138 |
| DBxref | InterPro:IPR036871 |
| DBxref | InterPro:IPR001683 |
| DBxref | PFAM:PF00787 |
| Product | Sorting nexin-3 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ACJE01000019.1 | supercontig | ACJE01000019.1:2309819..2310425 + |
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