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ASPNIDRAFT_199512-T1, ASPNIDRAFT_199512-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_199512-T1
Unique NameASPNIDRAFT_199512-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000019.1:2366435..2368242-

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_199512-T1 ID=ASPNIDRAFT_199512-T1|Name=ASPNIDRAFT_199512-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1808bp|location=Sequence derived from alignment at ACJE01000019.1:2366435..2368242- (Aspergillus niger ATCC 1015)
ATGTCTGACGATGATGATTTCATGCAAGATTCGGGTGATGAGGAGTAAGC
CTGTGTTGTCCCTTCAACCTGCCGGTGTTCGCGGCCGCTAATCAGCTGAA
CTATCACAGGTACGACTTCGAGTACGAAGATGCGGACGATGACGAATCGG
GAGATGTCGGTATCGAGAACAAATACTATAATGCCAAACAGATGAAGATA
GACAACCCGGAGGAGGCCATCGATGAATTCTTGGGAGTTCCGGATCTAGA
ACAAGACAAGGGTGACTGGTAAGAGGCGTGGACGTCAGTGATGGTTCAGA
CAAGGTGCTGACGGTAGCCAAGGGGGTTCAAAGGACTGAAGCAGGCTATC
AAGTTGGAATTCAAGCTTGGGAGATATAGCGATGTAAGCGCCCCTTGGCT
CACTGATGATGTGATACTGACTCTTCAGGCCGTTGAACACTACAGAGAGC
TCCTCACTTACGTCAAGTCGGCCGTCACTCGTAATTACTCCGAAAAGTCC
ATCAACAACATGCTAGATTATATCGAGAAGGGTTCGGATGATGACACAGC
TTACCAGTGCATGGAGGAATTCTATTCTTTGACCCTGCGCTCATTCCAAA
ATACCAACAACGAGCGACTATGGTTGAAGACAAACATCAAGTTGGCACGT
CTTTGGCTGGAACGAAAAGAGTACGGCCAGCTGAGCAAGAAGGTGCGGGA
GTTGCATCGGGCATGCCAGCGAGAAGATGGAACCGACGATCCGAGTAAAG
GAACATATCTCCTCGAACTATACGCCCTTGAGATACAGATGTATGCCGAG
ACGAAGAATAACAAACGACTAAAAGCGCTCTACCAGCGTGCCCTTCGCGT
TCGGTCGGCGGTGCCGCACCCCAAGATCATGGGAATCATCCGAGAATGCG
GAGGGAAAATGCATATGAGCGAGGAAAACTGGGAGGAAGCGCAGAGCGAC
TTCTTCGAGTCATTCCGGAACTACGATGAGGCGGGCTCAATACAGCGAAT
CCAGGTGCTCAAGTATCTCGTGTTGACCACGATGCTGATGAAATCGGATA
TCAACCCATTTTATTCCCAAGAAACCAAGCCGTACAAGAACGACCCCCGC
ATATCCGCTATGACCGATCTAGTCGATGCATTCCAACGCGACGACATCCA
CGCCTACGAAGCCATCCTTAGCAAAAACCCGGACGTCCTGGCCGATCCCT
TCATCGCCGAGAATATTGACGAGGTCAGCCGAAACATGCGGACGAAGGCT
GTTCTCAAACTGATCGCACCGTACACACGATTCACCCTTAAGTTCATCTC
GAAACACATCCGGGTCTCGGTACCCGAGGTACAAGACATCCTGAGCTTCC
TGATCCTGGACAAGAAGCTCAATGCCAAGATCGACCAGGAAAACGGGATT
GTGGAGGTTGAAAGCGCTAGCGACGTGGACCGGTTGCGGGCACTGCAGGA
GTGGAACGCATCATTGCGGTCTCTTTGGCAGGCGACCTTGAACGACGGGG
AGGGATTCAGGGAAGATCCCGCACAGCTGCACGGTATGAGAGGTGGAGGG
CCCATGTTCCAACCCGGGTTTGGAGATGAACCGCATGCAGGATTACGCGC
TGGTGGTCGCCGACTGCGGGGTGGACACAGAGGCAGAGGCGGCGGCGGAG
GGCCTGGAACGAAACTCGGCCTGGGAGGCGTCTAGAGAGGGAAATGCATT
GTTCCATCCAGTCATCCCACCAAACCATCTCTGCGTCATAGCCCATACAA
GATAGAGAAACACACCGGGTTACGAAGTAAGGATAAGGAATGAAATCATG
ACACACAA
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Coding sequence (CDS) from alignment at ACJE01000019.1:2366435..2368242-

>ASPNIDRAFT_199512-T1 ID=ASPNIDRAFT_199512-T1|Name=ASPNIDRAFT_199512-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=6084bp|location=Sequence derived from alignment at ACJE01000019.1:2366435..2368242- (Aspergillus niger ATCC 1015)
GCCGTTGAACACTACAGAGAGCTCCTCACTTACGTCAAGTCGGCCGTCAC
TCGTAATTACTCCGAAAAGTCCATCAACAACATGCTAGATTATATCGAGA
AGGGTTCGGATGATGACACAGCTTACCAGTGCATGGAGGAATTCTATTCT
TTGACCCTGCGCTCATTCCAAAATACCAACAACGAGCGACTATGGTTGAA
GACAAACATCAAGTTGGCACGTCTTTGGCTGGAACGAAAAGAGTACGGCC
AGCTGAGCAAGAAGGTGCGGGAGTTGCATCGGGCATGCCAGCGAGAAGAT
GGAACCGACGATCCGAGTAAAGGAACATATCTCCTCGAACTATACGCCCT
TGAGATACAGATGTATGCCGAGACGAAGAATAACAAACGACTAAAAGCGC
TCTACCAGCGTGCCCTTCGCGTTCGGTCGGCGGTGCCGCACCCCAAGATC
ATGGGAATCATCCGAGAATGCGGAGGGAAAATGCATATGAGCGAGGAAAA
CTGGGAGGAAGCGCAGAGCGACTTCTTCGAGTCATTCCGGAACTACGATG
AGGCGGGCTCAATACAGCGAATCCAGGTGCTCAAGTATCTCGTGTTGACC
ACGATGCTGATGAAATCGGATATCAACCCATTTTATTCCCAAGAAACCAA
GCCGTACAAGAACGACCCCCGCATATCCGCTATGACCGATCTAGTCGATG
CATTCCAACGCGACGACATCCACGCCTACGAAGCCATCCTTAGCAAAAAC
CCGGACGTCCTGGCCGATCCCTTCATCGCCGAGAATATTGACGAGGTCAG
CCGAAACATGCGGACGAAGGCTGTTCTCAAACTGATCGCACCGTACACAC
GATTCACCCTTAAGTTCATCTCGAAACACATCCGGGTCTCGGTACCCGAG
GTACAAGACATCCTGAGCTTCCTGATCCTGGACAAGAAGCTCAATGCCAA
GATCGACCAGGAAAACGGGATTGTGGAGGTTGAAAGCGCTAGCGACGTGG
ACCGGTTGCGGGCACTGCAGGAGTGGAACGCATCATTGCGGTCTCTTTGG
CAGGCGACCTTGAACGACGGGGAGGGATTCAGGGAAGATCCCGCACAGCT
GCACGGTATGAGAGGTGGAGGGCCCATGTTCCAACCCGGGTTTGGAGATG
AACCGCATGCAGGATTACGCGCTGGTGGTCGCCGACTGCGGGGTGGACAC
AGAGGCAGAGGCGGCGGCGGAGGGCCTGGAACGAAACTCGGCCTGGGAGG
CGTCTAGGGGGTTCAAAGGACTGAAGCAGGCTATCAAGTTGGAATTCAAG
CTTGGGAGATATAGCGATGTACGACTTCGAGTACGAAGATGCGGACGATG
ACGAATCGGGAGATGTCGGTATCGAGAACAAATACTATAATGCCAAACAG
ATGAAGATAGACAACCCGGAGGAGGCCATCGATGAATTCTTGGGAGTTCC
GGATCTAGAACAAGACAAGGGTGACTGATGTCTGACGATGATGATTTCAT
GCAAGATTCGGGTGATGAGGAGCCGTTGAACACTACAGAGAGCTCCTCAC
TTACGTCAAGTCGGCCGTCACTCGTAATTACTCCGAAAAGTCCATCAACA
ACATGCTAGATTATATCGAGAAGGGTTCGGATGATGACACAGCTTACCAG
TGCATGGAGGAATTCTATTCTTTGACCCTGCGCTCATTCCAAAATACCAA
CAACGAGCGACTATGGTTGAAGACAAACATCAAGTTGGCACGTCTTTGGC
TGGAACGAAAAGAGTACGGCCAGCTGAGCAAGAAGGTGCGGGAGTTGCAT
CGGGCATGCCAGCGAGAAGATGGAACCGACGATCCGAGTAAAGGAACATA
TCTCCTCGAACTATACGCCCTTGAGATACAGATGTATGCCGAGACGAAGA
ATAACAAACGACTAAAAGCGCTCTACCAGCGTGCCCTTCGCGTTCGGTCG
GCGGTGCCGCACCCCAAGATCATGGGAATCATCCGAGAATGCGGAGGGAA
AATGCATATGAGCGAGGAAAACTGGGAGGAAGCGCAGAGCGACTTCTTCG
AGTCATTCCGGAACTACGATGAGGCGGGCTCAATACAGCGAATCCAGGTG
CTCAAGTATCTCGTGTTGACCACGATGCTGATGAAATCGGATATCAACCC
ATTTTATTCCCAAGAAACCAAGCCGTACAAGAACGACCCCCGCATATCCG
CTATGACCGATCTAGTCGATGCATTCCAACGCGACGACATCCACGCCTAC
GAAGCCATCCTTAGCAAAAACCCGGACGTCCTGGCCGATCCCTTCATCGC
CGAGAATATTGACGAGGTCAGCCGAAACATGCGGACGAAGGCTGTTCTCA
AACTGATCGCACCGTACACACGATTCACCCTTAAGTTCATCTCGAAACAC
ATCCGGGTCTCGGTACCCGAGGTACAAGACATCCTGAGCTTCCTGATCCT
GGACAAGAAGCTCAATGCCAAGATCGACCAGGAAAACGGGATTGTGGAGG
TTGAAAGCGCTAGCGACGTGGACCGGTTGCGGGCACTGCAGGAGTGGAAC
GCATCATTGCGGTCTCTTTGGCAGGCGACCTTGAACGACGGGGAGGGATT
CAGGGAAGATCCCGCACAGCTGCACGGTATGAGAGGTGGAGGGCCCATGT
TCCAACCCGGGTTTGGAGATGAACCGCATGCAGGATTACGCGCTGGTGGT
CGCCGACTGCGGGGTGGACACAGAGGCAGAGGCGGCGGCGGAGGGCCTGG
AACGAAACTCGGCCTGGGAGGCGTCTAGGGGGTTCAAAGGACTGAAGCAG
GCTATCAAGTTGGAATTCAAGCTTGGGAGATATAGCGATGTACGACTTCG
AGTACGAAGATGCGGACGATGACGAATCGGGAGATGTCGGTATCGAGAAC
AAATACTATAATGCCAAACAGATGAAGATAGACAACCCGGAGGAGGCCAT
CGATGAATTCTTGGGAGTTCCGGATCTAGAACAAGACAAGGGTGACTGAT
GTCTGACGATGATGATTTCATGCAAGATTCGGGTGATGAGGAGCCGTTGA
ACACTACAGAGAGCTCCTCACTTACGTCAAGTCGGCCGTCACTCGTAATT
ACTCCGAAAAGTCCATCAACAACATGCTAGATTATATCGAGAAGGGTTCG
GATGATGACACAGCTTACCAGTGCATGGAGGAATTCTATTCTTTGACCCT
GCGCTCATTCCAAAATACCAACAACGAGCGACTATGGTTGAAGACAAACA
TCAAGTTGGCACGTCTTTGGCTGGAACGAAAAGAGTACGGCCAGCTGAGC
AAGAAGGTGCGGGAGTTGCATCGGGCATGCCAGCGAGAAGATGGAACCGA
CGATCCGAGTAAAGGAACATATCTCCTCGAACTATACGCCCTTGAGATAC
AGATGTATGCCGAGACGAAGAATAACAAACGACTAAAAGCGCTCTACCAG
CGTGCCCTTCGCGTTCGGTCGGCGGTGCCGCACCCCAAGATCATGGGAAT
CATCCGAGAATGCGGAGGGAAAATGCATATGAGCGAGGAAAACTGGGAGG
AAGCGCAGAGCGACTTCTTCGAGTCATTCCGGAACTACGATGAGGCGGGC
TCAATACAGCGAATCCAGGTGCTCAAGTATCTCGTGTTGACCACGATGCT
GATGAAATCGGATATCAACCCATTTTATTCCCAAGAAACCAAGCCGTACA
AGAACGACCCCCGCATATCCGCTATGACCGATCTAGTCGATGCATTCCAA
CGCGACGACATCCACGCCTACGAAGCCATCCTTAGCAAAAACCCGGACGT
CCTGGCCGATCCCTTCATCGCCGAGAATATTGACGAGGTCAGCCGAAACA
TGCGGACGAAGGCTGTTCTCAAACTGATCGCACCGTACACACGATTCACC
CTTAAGTTCATCTCGAAACACATCCGGGTCTCGGTACCCGAGGTACAAGA
CATCCTGAGCTTCCTGATCCTGGACAAGAAGCTCAATGCCAAGATCGACC
AGGAAAACGGGATTGTGGAGGTTGAAAGCGCTAGCGACGTGGACCGGTTG
CGGGCACTGCAGGAGTGGAACGCATCATTGCGGTCTCTTTGGCAGGCGAC
CTTGAACGACGGGGAGGGATTCAGGGAAGATCCCGCACAGCTGCACGGTA
TGAGAGGTGGAGGGCCCATGTTCCAACCCGGGTTTGGAGATGAACCGCAT
GCAGGATTACGCGCTGGTGGTCGCCGACTGCGGGGTGGACACAGAGGCAG
AGGCGGCGGCGGAGGGCCTGGAACGAAACTCGGCCTGGGAGGCGTCTAGG
GGGTTCAAAGGACTGAAGCAGGCTATCAAGTTGGAATTCAAGCTTGGGAG
ATATAGCGATGTACGACTTCGAGTACGAAGATGCGGACGATGACGAATCG
GGAGATGTCGGTATCGAGAACAAATACTATAATGCCAAACAGATGAAGAT
AGACAACCCGGAGGAGGCCATCGATGAATTCTTGGGAGTTCCGGATCTAG
AACAAGACAAGGGTGACTGATGTCTGACGATGATGATTTCATGCAAGATT
CGGGTGATGAGGAGCCGTTGAACACTACAGAGAGCTCCTCACTTACGTCA
AGTCGGCCGTCACTCGTAATTACTCCGAAAAGTCCATCAACAACATGCTA
GATTATATCGAGAAGGGTTCGGATGATGACACAGCTTACCAGTGCATGGA
GGAATTCTATTCTTTGACCCTGCGCTCATTCCAAAATACCAACAACGAGC
GACTATGGTTGAAGACAAACATCAAGTTGGCACGTCTTTGGCTGGAACGA
AAAGAGTACGGCCAGCTGAGCAAGAAGGTGCGGGAGTTGCATCGGGCATG
CCAGCGAGAAGATGGAACCGACGATCCGAGTAAAGGAACATATCTCCTCG
AACTATACGCCCTTGAGATACAGATGTATGCCGAGACGAAGAATAACAAA
CGACTAAAAGCGCTCTACCAGCGTGCCCTTCGCGTTCGGTCGGCGGTGCC
GCACCCCAAGATCATGGGAATCATCCGAGAATGCGGAGGGAAAATGCATA
TGAGCGAGGAAAACTGGGAGGAAGCGCAGAGCGACTTCTTCGAGTCATTC
CGGAACTACGATGAGGCGGGCTCAATACAGCGAATCCAGGTGCTCAAGTA
TCTCGTGTTGACCACGATGCTGATGAAATCGGATATCAACCCATTTTATT
CCCAAGAAACCAAGCCGTACAAGAACGACCCCCGCATATCCGCTATGACC
GATCTAGTCGATGCATTCCAACGCGACGACATCCACGCCTACGAAGCCAT
CCTTAGCAAAAACCCGGACGTCCTGGCCGATCCCTTCATCGCCGAGAATA
TTGACGAGGTCAGCCGAAACATGCGGACGAAGGCTGTTCTCAAACTGATC
GCACCGTACACACGATTCACCCTTAAGTTCATCTCGAAACACATCCGGGT
CTCGGTACCCGAGGTACAAGACATCCTGAGCTTCCTGATCCTGGACAAGA
AGCTCAATGCCAAGATCGACCAGGAAAACGGGATTGTGGAGGTTGAAAGC
GCTAGCGACGTGGACCGGTTGCGGGCACTGCAGGAGTGGAACGCATCATT
GCGGTCTCTTTGGCAGGCGACCTTGAACGACGGGGAGGGATTCAGGGAAG
ATCCCGCACAGCTGCACGGTATGAGAGGTGGAGGGCCCATGTTCCAACCC
GGGTTTGGAGATGAACCGCATGCAGGATTACGCGCTGGTGGTCGCCGACT
GCGGGGTGGACACAGAGGCAGAGGCGGCGGCGGAGGGCCTGGAACGAAAC
TCGGCCTGGGAGGCGTCTAGGGGGTTCAAAGGACTGAAGCAGGCTATCAA
GTTGGAATTCAAGCTTGGGAGATATAGCGATGTACGACTTCGAGTACGAA
GATGCGGACGATGACGAATCGGGAGATGTCGGTATCGAGAACAAATACTA
TAATGCCAAACAGATGAAGATAGACAACCCGGAGGAGGCCATCGATGAAT
TCTTGGGAGTTCCGGATCTAGAACAAGACAAGGGTGACTGATGTCTGACG
ATGATGATTTCATGCAAGATTCGGGTGATGAGGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_199512ASPNIDRAFT_199512Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_199512-T1ASPNIDRAFT_199512-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_199512-T1.cdsASPNIDRAFT_199512-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_199512-T1.utr3p1ASPNIDRAFT_199512-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_199512-T1.exon4ASPNIDRAFT_199512-T1.exon4Aspergillus niger ATCC 1015exon
ASPNIDRAFT_199512-T1.exon3ASPNIDRAFT_199512-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_199512-T1.exon2ASPNIDRAFT_199512-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_199512-T1.exon1ASPNIDRAFT_199512-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
DBxrefInterPro:IPR036390
DBxrefInterPro:IPR000717
DBxrefPFAM:PF01399
Product subunit CSN2
ProductCOP9 signalosome
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000019.1supercontigACJE01000019.1:2366435..2368242 -
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