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ASPNIDRAFT_202461-T1, ASPNIDRAFT_202461-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_202461-T1
Unique NameASPNIDRAFT_202461-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000020.1:888741..890298-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_202461-T1 ID=ASPNIDRAFT_202461-T1|Name=ASPNIDRAFT_202461-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1558bp|location=Sequence derived from alignment at ACJE01000020.1:888741..890298- (Aspergillus niger ATCC 1015)
AACAACCGCCGACAACATACATCCCAAGGGAGTATCCTAGAGCAGCGCTC
TTCCTTTCGCTGGATATATCCTTTTTGAACCGGTGACAGAGAGCAGGATG
TCCGCCATCGAGCCAGTCGTGCGTACCGCCCCATCCCGAAACTATCATCC
ACATACAATCTCCTTGAAATTGAATACACATGTGTCAAATGAGGGCGTCA
CGGTCCTGGAGTCGGAAATTCATATACCAAAGTACATTTGTCGCTGACTT
GAATTGTTGGGTTTTCGCAGGTCGTCATTGACGGCAAGGGACACCTCTTG
GGTCGCCTGGCCAGCACTGTTGCTAAGCAGCTGCTCAACGGTCAGAAGAT
CGTCGTCGTGAGATGTGAAGCCCTCAACATCTCCGGCGAGTTCTTCCGTG
CGAAGCGTATGTTCTATCCGACCCGGTTTCTTTCGATTTCATTTTGCAAT
ATGGATTTTCTTTGGGATGAATGGGAGTGCGACGGTTTTCGACATATGGA
GGAGGACATCGGCAATTGATTGGAATATTTATGGAGGAACAAGCAACACA
TGTGTGCTGGTGGACAACGGGCTGACCTGGATTTCGCGATATAGTCAAGT
ACCACGCCTACCTTCGCAAGATGACTCGTTTCAACCCCACCCGCGGAGGT
GAGACTACCCGATGACTTTCCCCCTTCGATGGGGAAAGACGACACTTATC
TCTTTTGCGGGACTCCGTGCTGAATCGCTACAGGTCCCTTCCACTTCCGT
GCCCCCTCCCGCATCTTCTACAAGGCTGTCCGCGGCATGATCCCCCACAA
GACCGCCCGTGGTGCCGCCGCTATGGAGCGCCTGAAGGTTTTCGAGGGTG
TTCCTCCCCCCTACGACAAGAAGAAGCGCGTTGTCGTTCCCCAGGCTCTG
CGTGTTCTCCGCCTGCGCCCCGGCCGCAAGTACTGCACCGTTGGTCGTCT
CAGCCACGAGGTTGGCTGGAAGTACCAGGACGTTGTTGCCAGGTACGTTT
ATGCTGAAGTGGAGAGGATAAAATGGGAGATGTTGGAATATTGGGTGCAG
AAGGCTAACGGATTCGTTTTTTCTACTCGTACAGACTTGAGGAGCGCAGA
AAGGTTAAGAGCAGTGCATACTACGAGCGCAAGAAGGCCGCTCGCCGCCA
ACTCGTCCACGCCCAGAAGTCGGCGGGTGTTAACGAGCAGACCAAGAGCC
AGCTCGCTCAGTACGGATACTAGATACCTAGTTGCGCGGCTGGTTGCTTG
TGTTTGTGATGGGATGGGATGGGATCGCGAAACGGTTCTCTGCGAAGAAA
ATGGACAGCAAGCCGATCGACCTTTTTCTCACTGTCCCTACCTTTTCATG
AAATACCACAATTCTTACGTTGTGACGCACATGGAGGCTGGAGAGATCGA
TTCTTTCTACAAAAAAAATACAGGAGTCACTTGGGATGAAAGGTTGTTCA
AAATAGCTGACCCGTTATTTCGCGCCGTGGCGGTTTAATCCAAGAATTTC
TTTTCAAGAGTTCAAATGACTTTGCTGTGACGAATCCGATGCACCATTTA
CCACCGCT
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Coding sequence (CDS) from alignment at ACJE01000020.1:888741..890298-

>ASPNIDRAFT_202461-T1 ID=ASPNIDRAFT_202461-T1|Name=ASPNIDRAFT_202461-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=3045bp|location=Sequence derived from alignment at ACJE01000020.1:888741..890298- (Aspergillus niger ATCC 1015)
ACTTGAGGAGCGCAGAAAGGTTAAGAGCAGTGCATACTACGAGCGCAAGA
AGGCCGCTCGCCGCCAACTCGTCCACGCCCAGAAGTCGGCGGGTGTTAAC
GAGCAGACCAAGAGCCAGCTCGCTCAGTACGGATACTAGGTCCCTTCCAC
TTCCGTGCCCCCTCCCGCATCTTCTACAAGGCTGTCCGCGGCATGATCCC
CCACAAGACCGCCCGTGGTGCCGCCGCTATGGAGCGCCTGAAGGTTTTCG
AGGGTGTTCCTCCCCCCTACGACAAGAAGAAGCGCGTTGTCGTTCCCCAG
GCTCTGCGTGTTCTCCGCCTGCGCCCCGGCCGCAAGTACTGCACCGTTGG
TCGTCTCAGCCACGAGGTTGGCTGGAAGTACCAGGACGTTGTTGCCAGTC
AAGTACCACGCCTACCTTCGCAAGATGACTCGTTTCAACCCCACCCGCGG
AGGTCGTCATTGACGGCAAGGGACACCTCTTGGGTCGCCTGGCCAGCACT
GTTGCTAAGCAGCTGCTCAACGGTCAGAAGATCGTCGTCGTGAGATGTGA
AGCCCTCAACATCTCCGGCGAGTTCTTCCGTGCGAAGCATGTCCGCCATC
GAGCCAGTCACTTGAGGAGCGCAGAAAGGTTAAGAGCAGTGCATACTACG
AGCGCAAGAAGGCCGCTCGCCGCCAACTCGTCCACGCCCAGAAGTCGGCG
GGTGTTAACGAGCAGACCAAGAGCCAGCTCGCTCAGTACGGATACTAGGT
CCCTTCCACTTCCGTGCCCCCTCCCGCATCTTCTACAAGGCTGTCCGCGG
CATGATCCCCCACAAGACCGCCCGTGGTGCCGCCGCTATGGAGCGCCTGA
AGGTTTTCGAGGGTGTTCCTCCCCCCTACGACAAGAAGAAGCGCGTTGTC
GTTCCCCAGGCTCTGCGTGTTCTCCGCCTGCGCCCCGGCCGCAAGTACTG
CACCGTTGGTCGTCTCAGCCACGAGGTTGGCTGGAAGTACCAGGACGTTG
TTGCCAGTCAAGTACCACGCCTACCTTCGCAAGATGACTCGTTTCAACCC
CACCCGCGGAGGTCGTCATTGACGGCAAGGGACACCTCTTGGGTCGCCTG
GCCAGCACTGTTGCTAAGCAGCTGCTCAACGGTCAGAAGATCGTCGTCGT
GAGATGTGAAGCCCTCAACATCTCCGGCGAGTTCTTCCGTGCGAAGCATG
TCCGCCATCGAGCCAGTCACTTGAGGAGCGCAGAAAGGTTAAGAGCAGTG
CATACTACGAGCGCAAGAAGGCCGCTCGCCGCCAACTCGTCCACGCCCAG
AAGTCGGCGGGTGTTAACGAGCAGACCAAGAGCCAGCTCGCTCAGTACGG
ATACTAGGTCCCTTCCACTTCCGTGCCCCCTCCCGCATCTTCTACAAGGC
TGTCCGCGGCATGATCCCCCACAAGACCGCCCGTGGTGCCGCCGCTATGG
AGCGCCTGAAGGTTTTCGAGGGTGTTCCTCCCCCCTACGACAAGAAGAAG
CGCGTTGTCGTTCCCCAGGCTCTGCGTGTTCTCCGCCTGCGCCCCGGCCG
CAAGTACTGCACCGTTGGTCGTCTCAGCCACGAGGTTGGCTGGAAGTACC
AGGACGTTGTTGCCAGTCAAGTACCACGCCTACCTTCGCAAGATGACTCG
TTTCAACCCCACCCGCGGAGGTCGTCATTGACGGCAAGGGACACCTCTTG
GGTCGCCTGGCCAGCACTGTTGCTAAGCAGCTGCTCAACGGTCAGAAGAT
CGTCGTCGTGAGATGTGAAGCCCTCAACATCTCCGGCGAGTTCTTCCGTG
CGAAGCATGTCCGCCATCGAGCCAGTCACTTGAGGAGCGCAGAAAGGTTA
AGAGCAGTGCATACTACGAGCGCAAGAAGGCCGCTCGCCGCCAACTCGTC
CACGCCCAGAAGTCGGCGGGTGTTAACGAGCAGACCAAGAGCCAGCTCGC
TCAGTACGGATACTAGGTCCCTTCCACTTCCGTGCCCCCTCCCGCATCTT
CTACAAGGCTGTCCGCGGCATGATCCCCCACAAGACCGCCCGTGGTGCCG
CCGCTATGGAGCGCCTGAAGGTTTTCGAGGGTGTTCCTCCCCCCTACGAC
AAGAAGAAGCGCGTTGTCGTTCCCCAGGCTCTGCGTGTTCTCCGCCTGCG
CCCCGGCCGCAAGTACTGCACCGTTGGTCGTCTCAGCCACGAGGTTGGCT
GGAAGTACCAGGACGTTGTTGCCAGTCAAGTACCACGCCTACCTTCGCAA
GATGACTCGTTTCAACCCCACCCGCGGAGGTCGTCATTGACGGCAAGGGA
CACCTCTTGGGTCGCCTGGCCAGCACTGTTGCTAAGCAGCTGCTCAACGG
TCAGAAGATCGTCGTCGTGAGATGTGAAGCCCTCAACATCTCCGGCGAGT
TCTTCCGTGCGAAGCATGTCCGCCATCGAGCCAGTCACTTGAGGAGCGCA
GAAAGGTTAAGAGCAGTGCATACTACGAGCGCAAGAAGGCCGCTCGCCGC
CAACTCGTCCACGCCCAGAAGTCGGCGGGTGTTAACGAGCAGACCAAGAG
CCAGCTCGCTCAGTACGGATACTAGGTCCCTTCCACTTCCGTGCCCCCTC
CCGCATCTTCTACAAGGCTGTCCGCGGCATGATCCCCCACAAGACCGCCC
GTGGTGCCGCCGCTATGGAGCGCCTGAAGGTTTTCGAGGGTGTTCCTCCC
CCCTACGACAAGAAGAAGCGCGTTGTCGTTCCCCAGGCTCTGCGTGTTCT
CCGCCTGCGCCCCGGCCGCAAGTACTGCACCGTTGGTCGTCTCAGCCACG
AGGTTGGCTGGAAGTACCAGGACGTTGTTGCCAGTCAAGTACCACGCCTA
CCTTCGCAAGATGACTCGTTTCAACCCCACCCGCGGAGGTCGTCATTGAC
GGCAAGGGACACCTCTTGGGTCGCCTGGCCAGCACTGTTGCTAAGCAGCT
GCTCAACGGTCAGAAGATCGTCGTCGTGAGATGTGAAGCCCTCAACATCT
CCGGCGAGTTCTTCCGTGCGAAGCATGTCCGCCATCGAGCCAGTC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0015934large ribosomal subunit
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CRP46ASPNIDRAFT_202461Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_202461-T1ASPNIDRAFT_202461-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_202461-T1.cdsASPNIDRAFT_202461-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_202461-T1.utr3p1ASPNIDRAFT_202461-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_202461-T1.exon5ASPNIDRAFT_202461-T1.exon5Aspergillus niger ATCC 1015exon
ASPNIDRAFT_202461-T1.exon4ASPNIDRAFT_202461-T1.exon4Aspergillus niger ATCC 1015exon
ASPNIDRAFT_202461-T1.exon3ASPNIDRAFT_202461-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_202461-T1.exon2ASPNIDRAFT_202461-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_202461-T1.exon1ASPNIDRAFT_202461-T1.exon1Aspergillus niger ATCC 1015exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_202461-T1.utr5p1ASPNIDRAFT_202461-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR023563
DBxrefInterPro:IPR005755
DBxrefInterPro:IPR036899
DBxrefInterPro:IPR005822
DBxrefPFAM:PF00572
Product60S ribosomal protein L16
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000020.1supercontigACJE01000020.1:888741..890298 -
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