You are here

Home

ASPNIDRAFT_49903-T1, ASPNIDRAFT_49903-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_49903-T1
Unique NameASPNIDRAFT_49903-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000020.1:1086040..1087688+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_49903-T1 ID=ASPNIDRAFT_49903-T1|Name=ASPNIDRAFT_49903-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1649bp|location=Sequence derived from alignment at ACJE01000020.1:1086040..1087688+ (Aspergillus niger ATCC 1015)
ATGTCAGACTCTCAGGATCCAGGAGATACTGTCAAAGAACTTCCTCTTCG
CCCAGCTGCATCGAAAACCATCAACGATCCTCAGCAGACGGACCCGTTAC
CAGAAACCTCAGAAGATAAACCAGACTCGACCCCCACCAGTCCTAAATCT
CAGTCACTCGAGGAGTTACCCATTGAAATTGACCAGGCTAAGAAGAAAAA
GAAGAAGAGCAAGGCGCGTCCCAAGAGTAAGCGTGGAAAGGTGAGACCAC
TTACGAATGCGAAGAATTGCAACCAGACTGAATTCTACAGAACAAGCCTA
CCGGTTTCGAAGAGTACTATGTCGACGCACCCATTACCCCCGAGGAATTT
AGCGCTGAAAAGGAGCTCTACAATGTGTATGTTCCCAACACCCAACGTAT
AGCACCCGCTGACCGGCATTGGCGTGAAGCTCGCGACCTCTCACCCAGTA
AGTCTTGCCACCTTATGGTTCTGGCTCTCATACTGACCAGTCCCAGCCGA
ATTGAGGACGCTCTCTTACGCTACCAAAAGAATCGTCGTCTGGAGTCAGA
CAGACGAGATGTTTTCCTGAAATATCTGGCATATGGAGGGGTGAACGTCG
GTCAGAGGATGTTCGGGGGCTTGGATGGCCGTGACCTCCAGCAACTGGAC
AGCGAACAGATCCTACAAGCGCGAGCAGTGCCCAGCGTAGGCAAGGACAA
ATCTAATCTTGCTGTTGATTTTGATGCAGTGGTTCGCGGCTTTCTGTAGG
AGTTACACACGCCGTGAAACTGCGTTTGACTAACTCACAATAGGACTTCC
TTCTTTCCATACTATTTTAACCCCGACACCGAAGATATGATCAAGCTAGC
GACAGTCACCATTCGGAACTTTCTATCCTACCTCCTCTATCATGATGTAT
GCCCGGAGTACAACGATAACATCGACCAGGCCAGGACGTCGTGCGATATA
GCTACAAGGGAGCTGTGGAACAACCAGCAACTCATGGCCAAAGGCCCTGG
TGACTTCAACTCGTGCTGTTCCTTGCTTTTCGGTGGAGAGCTGCATGACA
CATATACGGAGGGCAATCAGTGGAGAAACTCCAAGGATGATGCGCCTCGC
CTGACCACTGAGATAGCCCGCAAAATCGTCAAGTTTGCCCTGGCCGGCGC
GGGTGAGAATCGCCATGCCCTCCGGTTCCAGGAACTGACCGAGAATAAAA
CGCTGTGCGCAGTGCGTATCGAGGATATTGATGGGTTTGAGATTACCGCT
GTTCACCCTCCCGGCGAAGTCGTCCGCGAGTTCTACCAGACGCACGCCCC
GGATCTTGTCCCCGTCGGAAAGCTGCTAGCAAGGACTTACCGAGATCCAG
GTATGCCTGATTATGATCGCAGCCCGGAGGAGCGAGTGGTACAGCCGGAA
AGGAACTTTGAATTCTTCATGGAGGGCAATCTACTTCAGTACTGCTACCC
GGGAATGAAAGTAATCGCTCCGGTATGGGAGCTGAATTGTGGATTCCATT
ATTTCGAGGATGCGTATAGGACGTATGGCTCCAATTACACCCCTCTCGTG
AATGACTTGATGCTAGGATGGAAGGAGCCGAGGGATCTAGCCAAAGCAGA
GAGCAAAGCAGAGAGCGATGGGGAGGATGACTCGTCTGTTACTCTGTGA
back to top

Coding sequence (CDS) from alignment at ACJE01000020.1:1086040..1087688+

>ASPNIDRAFT_49903-T1 ID=ASPNIDRAFT_49903-T1|Name=ASPNIDRAFT_49903-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=5724bp|location=Sequence derived from alignment at ACJE01000020.1:1086040..1087688+ (Aspergillus niger ATCC 1015)
ATGTCAGACTCTCAGGATCCAGGAGATACTGTCAAAGAACTTCCTCTTCG
CCCAGCTGCATCGAAAACCATCAACGATCCTCAGCAGACGGACCCGTTAC
CAGAAACCTCAGAAGATAAACCAGACTCGACCCCCACCAGTCCTAAATCT
CAGTCACTCGAGGAGTTACCCATTGAAATTGACCAGGCTAAGAAGAAAAA
GAAGAAGAGCAAGGCGCGTCCCAAGAGTAAGCGTGGAAAGAACAAGCCTA
CCGGTTTCGAAGAGTACTATGTCGACGCACCCATTACCCCCGAGGAATTT
AGCGCTGAAAAGGAGCTCTACAATGTCCGAATTGAGGACGCTCTCTTACG
CTACCAAAAGAATCGTCGTCTGGAGTCAGACAGACGAGATGTTTTCCTGA
AATATCTGGCATATGGAGGGGTGAACGTCGGTCAGAGGATGTTCGGGGGC
TTGGATGGCCGTGACCTCCAGCAACTGGACAGCGAACAGATCCTACAAGC
GCGAGCAGTGCCCAGCGTAGGCAAGGACAAATCTAATCTTGCTGTTGATT
TTGATGCAGTGGTTCGCGGCTTTCTGACTTCCTTCTTTCCATACTATTTT
AACCCCGACACCGAAGATATGATCAAGCTAGCGACAGTCACCATTCGGAA
CTTTCTATCCTACCTCCTCTATCATGATGTATGCCCGGAGTACAACGATA
ACATCGACCAGGCCAGGACGTCGTGCGATATAGCTACAAGGGAGCTGTGG
AACAACCAGCAACTCATGGCCAAAGGCCCTGGTGACTTCAACTCGTGCTG
TTCCTTGCTTTTCGGTGGAGAGCTGCATGACACATATACGGAGGGCAATC
AGTGGAGAAACTCCAAGGATGATGCGCCTCGCCTGACCACTGAGATAGCC
CGCAAAATCGTCAAGTTTGCCCTGGCCGGCGCGGGTGAGAATCGCCATGC
CCTCCGGTTCCAGGAACTGACCGAGAATAAAACGCTGTGCGCAGTGCGTA
TCGAGGATATTGATGGGTTTGAGATTACCGCTGTTCACCCTCCCGGCGAA
GTCGTCCGCGAGTTCTACCAGACGCACGCCCCGGATCTTGTCCCCGTCGG
AAAGCTGCTAGCAAGGACTTACCGAGATCCAGGTATGCCTGATTATGATC
GCAGCCCGGAGGAGCGAGTGGTACAGCCGGAAAGGAACTTTGAATTCTTC
ATGGAGGGCAATCTACTTCAGTACTGCTACCCGGGAATGAAAGTAATCGC
TCCGGTATGGGAGCTGAATTGTGGATTCCATTATTTCGAGGATGCGTATA
GGACGTATGGCTCCAATTACACCCCTCTCGTGAATGACTTGATGCTAGGA
TGGAAGGAGCCGAGGGATCTAGCCAAAGCAGAGAGCAAAGCAGAGAGCGA
TGGGGAGGATGACTCGTCTGTTACTCTGTGAATGTCAGACTCTCAGGATC
CAGGAGATACTGTCAAAGAACTTCCTCTTCGCCCAGCTGCATCGAAAACC
ATCAACGATCCTCAGCAGACGGACCCGTTACCAGAAACCTCAGAAGATAA
ACCAGACTCGACCCCCACCAGTCCTAAATCTCAGTCACTCGAGGAGTTAC
CCATTGAAATTGACCAGGCTAAGAAGAAAAAGAAGAAGAGCAAGGCGCGT
CCCAAGAGTAAGCGTGGAAAGAACAAGCCTACCGGTTTCGAAGAGTACTA
TGTCGACGCACCCATTACCCCCGAGGAATTTAGCGCTGAAAAGGAGCTCT
ACAATGTCCGAATTGAGGACGCTCTCTTACGCTACCAAAAGAATCGTCGT
CTGGAGTCAGACAGACGAGATGTTTTCCTGAAATATCTGGCATATGGAGG
GGTGAACGTCGGTCAGAGGATGTTCGGGGGCTTGGATGGCCGTGACCTCC
AGCAACTGGACAGCGAACAGATCCTACAAGCGCGAGCAGTGCCCAGCGTA
GGCAAGGACAAATCTAATCTTGCTGTTGATTTTGATGCAGTGGTTCGCGG
CTTTCTGACTTCCTTCTTTCCATACTATTTTAACCCCGACACCGAAGATA
TGATCAAGCTAGCGACAGTCACCATTCGGAACTTTCTATCCTACCTCCTC
TATCATGATGTATGCCCGGAGTACAACGATAACATCGACCAGGCCAGGAC
GTCGTGCGATATAGCTACAAGGGAGCTGTGGAACAACCAGCAACTCATGG
CCAAAGGCCCTGGTGACTTCAACTCGTGCTGTTCCTTGCTTTTCGGTGGA
GAGCTGCATGACACATATACGGAGGGCAATCAGTGGAGAAACTCCAAGGA
TGATGCGCCTCGCCTGACCACTGAGATAGCCCGCAAAATCGTCAAGTTTG
CCCTGGCCGGCGCGGGTGAGAATCGCCATGCCCTCCGGTTCCAGGAACTG
ACCGAGAATAAAACGCTGTGCGCAGTGCGTATCGAGGATATTGATGGGTT
TGAGATTACCGCTGTTCACCCTCCCGGCGAAGTCGTCCGCGAGTTCTACC
AGACGCACGCCCCGGATCTTGTCCCCGTCGGAAAGCTGCTAGCAAGGACT
TACCGAGATCCAGGTATGCCTGATTATGATCGCAGCCCGGAGGAGCGAGT
GGTACAGCCGGAAAGGAACTTTGAATTCTTCATGGAGGGCAATCTACTTC
AGTACTGCTACCCGGGAATGAAAGTAATCGCTCCGGTATGGGAGCTGAAT
TGTGGATTCCATTATTTCGAGGATGCGTATAGGACGTATGGCTCCAATTA
CACCCCTCTCGTGAATGACTTGATGCTAGGATGGAAGGAGCCGAGGGATC
TAGCCAAAGCAGAGAGCAAAGCAGAGAGCGATGGGGAGGATGACTCGTCT
GTTACTCTGTGAATGTCAGACTCTCAGGATCCAGGAGATACTGTCAAAGA
ACTTCCTCTTCGCCCAGCTGCATCGAAAACCATCAACGATCCTCAGCAGA
CGGACCCGTTACCAGAAACCTCAGAAGATAAACCAGACTCGACCCCCACC
AGTCCTAAATCTCAGTCACTCGAGGAGTTACCCATTGAAATTGACCAGGC
TAAGAAGAAAAAGAAGAAGAGCAAGGCGCGTCCCAAGAGTAAGCGTGGAA
AGAACAAGCCTACCGGTTTCGAAGAGTACTATGTCGACGCACCCATTACC
CCCGAGGAATTTAGCGCTGAAAAGGAGCTCTACAATGTCCGAATTGAGGA
CGCTCTCTTACGCTACCAAAAGAATCGTCGTCTGGAGTCAGACAGACGAG
ATGTTTTCCTGAAATATCTGGCATATGGAGGGGTGAACGTCGGTCAGAGG
ATGTTCGGGGGCTTGGATGGCCGTGACCTCCAGCAACTGGACAGCGAACA
GATCCTACAAGCGCGAGCAGTGCCCAGCGTAGGCAAGGACAAATCTAATC
TTGCTGTTGATTTTGATGCAGTGGTTCGCGGCTTTCTGACTTCCTTCTTT
CCATACTATTTTAACCCCGACACCGAAGATATGATCAAGCTAGCGACAGT
CACCATTCGGAACTTTCTATCCTACCTCCTCTATCATGATGTATGCCCGG
AGTACAACGATAACATCGACCAGGCCAGGACGTCGTGCGATATAGCTACA
AGGGAGCTGTGGAACAACCAGCAACTCATGGCCAAAGGCCCTGGTGACTT
CAACTCGTGCTGTTCCTTGCTTTTCGGTGGAGAGCTGCATGACACATATA
CGGAGGGCAATCAGTGGAGAAACTCCAAGGATGATGCGCCTCGCCTGACC
ACTGAGATAGCCCGCAAAATCGTCAAGTTTGCCCTGGCCGGCGCGGGTGA
GAATCGCCATGCCCTCCGGTTCCAGGAACTGACCGAGAATAAAACGCTGT
GCGCAGTGCGTATCGAGGATATTGATGGGTTTGAGATTACCGCTGTTCAC
CCTCCCGGCGAAGTCGTCCGCGAGTTCTACCAGACGCACGCCCCGGATCT
TGTCCCCGTCGGAAAGCTGCTAGCAAGGACTTACCGAGATCCAGGTATGC
CTGATTATGATCGCAGCCCGGAGGAGCGAGTGGTACAGCCGGAAAGGAAC
TTTGAATTCTTCATGGAGGGCAATCTACTTCAGTACTGCTACCCGGGAAT
GAAAGTAATCGCTCCGGTATGGGAGCTGAATTGTGGATTCCATTATTTCG
AGGATGCGTATAGGACGTATGGCTCCAATTACACCCCTCTCGTGAATGAC
TTGATGCTAGGATGGAAGGAGCCGAGGGATCTAGCCAAAGCAGAGAGCAA
AGCAGAGAGCGATGGGGAGGATGACTCGTCTGTTACTCTGTGAATGTCAG
ACTCTCAGGATCCAGGAGATACTGTCAAAGAACTTCCTCTTCGCCCAGCT
GCATCGAAAACCATCAACGATCCTCAGCAGACGGACCCGTTACCAGAAAC
CTCAGAAGATAAACCAGACTCGACCCCCACCAGTCCTAAATCTCAGTCAC
TCGAGGAGTTACCCATTGAAATTGACCAGGCTAAGAAGAAAAAGAAGAAG
AGCAAGGCGCGTCCCAAGAGTAAGCGTGGAAAGAACAAGCCTACCGGTTT
CGAAGAGTACTATGTCGACGCACCCATTACCCCCGAGGAATTTAGCGCTG
AAAAGGAGCTCTACAATGTCCGAATTGAGGACGCTCTCTTACGCTACCAA
AAGAATCGTCGTCTGGAGTCAGACAGACGAGATGTTTTCCTGAAATATCT
GGCATATGGAGGGGTGAACGTCGGTCAGAGGATGTTCGGGGGCTTGGATG
GCCGTGACCTCCAGCAACTGGACAGCGAACAGATCCTACAAGCGCGAGCA
GTGCCCAGCGTAGGCAAGGACAAATCTAATCTTGCTGTTGATTTTGATGC
AGTGGTTCGCGGCTTTCTGACTTCCTTCTTTCCATACTATTTTAACCCCG
ACACCGAAGATATGATCAAGCTAGCGACAGTCACCATTCGGAACTTTCTA
TCCTACCTCCTCTATCATGATGTATGCCCGGAGTACAACGATAACATCGA
CCAGGCCAGGACGTCGTGCGATATAGCTACAAGGGAGCTGTGGAACAACC
AGCAACTCATGGCCAAAGGCCCTGGTGACTTCAACTCGTGCTGTTCCTTG
CTTTTCGGTGGAGAGCTGCATGACACATATACGGAGGGCAATCAGTGGAG
AAACTCCAAGGATGATGCGCCTCGCCTGACCACTGAGATAGCCCGCAAAA
TCGTCAAGTTTGCCCTGGCCGGCGCGGGTGAGAATCGCCATGCCCTCCGG
TTCCAGGAACTGACCGAGAATAAAACGCTGTGCGCAGTGCGTATCGAGGA
TATTGATGGGTTTGAGATTACCGCTGTTCACCCTCCCGGCGAAGTCGTCC
GCGAGTTCTACCAGACGCACGCCCCGGATCTTGTCCCCGTCGGAAAGCTG
CTAGCAAGGACTTACCGAGATCCAGGTATGCCTGATTATGATCGCAGCCC
GGAGGAGCGAGTGGTACAGCCGGAAAGGAACTTTGAATTCTTCATGGAGG
GCAATCTACTTCAGTACTGCTACCCGGGAATGAAAGTAATCGCTCCGGTA
TGGGAGCTGAATTGTGGATTCCATTATTTCGAGGATGCGTATAGGACGTA
TGGCTCCAATTACACCCCTCTCGTGAATGACTTGATGCTAGGATGGAAGG
AGCCGAGGGATCTAGCCAAAGCAGAGAGCAAAGCAGAGAGCGATGGGGAG
GATGACTCGTCTGTTACTCTGTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0033167ARC complex
Vocabulary: Biological Process
TermDefinition
GO:0031047gene silencing by RNA
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_49903ASPNIDRAFT_49903Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_49903-T1.exon1ASPNIDRAFT_49903-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_49903-T1.exon2ASPNIDRAFT_49903-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_49903-T1.exon3ASPNIDRAFT_49903-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_49903-T1.exon4ASPNIDRAFT_49903-T1.exon4Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_49903-T1.cdsASPNIDRAFT_49903-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_49903-T1ASPNIDRAFT_49903-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR018606
DBxrefPFAM:PF09692
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000020.1supercontigACJE01000020.1:1086040..1087688 +
Powered by Drupal