You are here

Home

ASPNIDRAFT_208051-T1, ASPNIDRAFT_208051-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_208051-T1
Unique NameASPNIDRAFT_208051-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000021.1:1343253..1344864+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_208051-T1 ID=ASPNIDRAFT_208051-T1|Name=ASPNIDRAFT_208051-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1612bp|location=Sequence derived from alignment at ACJE01000021.1:1343253..1344864+ (Aspergillus niger ATCC 1015)
GTTTGACGTCGATCTCGGGGACTTTTTCACAATGATTGCCGCCAGGAACT
TTGTCGCTCCCGCCCGTCAATGCTTGCGGACAACACGTGTGTCCCCTCGC
ATTGCCTCGCCCTTCTCGCAGGTAATCTACCGACCGCTTTCCTCGACAAC
ATGGCCTGGAAGGAATCTCGATCTAACTGCACTTTTAGCTCCGCACTTAC
TCCGCCGCTGCCGATGAGCGCGTCGCTAAGTTCAAGGGTCAGAAGGATAC
TGATGTATGTCGCGTCCCGGGCAACGCCTGAAACATTTTTTTGCTTCCAT
CCTTTGGTCCGGTAGCTTCCGCCGCAACCTGCGACAACGGCCTGTATTCG
ACAGCTCTTCCGAAGGATGGATCATTTCTGAATGGCGTTGTTGACATTAT
GTGTCCTGATAGGGAAAATACACTGTTACTCTGATCGAGGGTGATGGTAT
CGGTCCCGAGATCTCCCAGTCGGTGAAGGATATCTTCGCTGCCGCAAACG
TACGCCTCCCGCTACTTCCGATCGCCTCTAGTATACAAATCCAGCGATGC
TAAATTACCTGTGTGCAGGCCCCTATCAAGTGGGAGCCCGTCGATGTTAC
TCCCATCCTGAAGGACGGCAAGACCGCCATCCCCGACGACGCCATCAAGA
GCGTCCAGAAGAACTACGTTGCGCTCAAGGGTCCTCTTGCTGTATGTCCA
TGCTTCCTAGACTGTTTTGCGATAAGTCTTTCTCTAAACGCTTTGTCACA
TAGACCCCCGTCGGCAAGGGACACGTCTCTCTGAACCTGACCCTCCGTCG
TACTTTCAACCTCTTCGCCAACGTCCGTCCCTGCCGCTCCGTTGCCGGTT
ACAAGACCCCCTACGACAATGTCGACACCGTCCTGATCCGTGAGAACACC
GAGGGTGAATACTCCGGCATTGAGCACGTCGTCGTCGACGGTGTTGTCCA
GAGCATCAAGCTCATCACCAAGGAGGCCTCCGAGAGAGTGCTCCGCTTCG
CCTTCCAGTACGCTCGTTCCATCAACAAGAAGAAGGTCCGTGTCGTGCAC
AAGGCCACCATCATGAAGATGTCCGACGGTCTCTTCCTCAACCTTGCTCG
TGACATTGCCAAGGAGTTCCCCGACGTCGAGTTCGATGCTGAGCTGCTGG
ACAACTCGTGCCTGAAGATCGTTACCGACCCCACCCCCTACAACGACAAG
GTCCTTGTCATGCCCAACCTGTATGGTGACATTCTGTCCGATATGTGCGC
CGGTCTGATCGGTGGTCTTGGTCTGACCCCCTCCGGTAACATTGGTGACG
AGTGCTCCATCTTCGAGGCTGTCCACGGTTCCGCCCCCGACATTGCTGGC
AAGGGTCTTGCCAACCCCACTGCTCTGCTTCTGAGCAGTATCATGATGCT
TCAGCACATGGGTCTGAATGAGCACGCCACTCGTATCCAGAAGGCTACTT
TCGACACCCTCGCCGAAGGAAAGGTAAGCTAGCATTTTATCAAAGTGACG
GTACCATTGCGAGACACGATGCTAACAATTGCGATTTTAGGCCCTCACCG
GTGACTTGGGTGGTTCCGCCAAGACCCACGAGTATGCTGAGGCCATCATG
AAGCGTCTGTAA
back to top

Coding sequence (CDS) from alignment at ACJE01000021.1:1343253..1344864+

>ASPNIDRAFT_208051-T1 ID=ASPNIDRAFT_208051-T1|Name=ASPNIDRAFT_208051-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=6948bp|location=Sequence derived from alignment at ACJE01000021.1:1343253..1344864+ (Aspergillus niger ATCC 1015)
ATGATTGCCGCCAGGAACTTTGTCGCTCCCGCCCGTCAATGCTTGCGGAC
AACACGTGTGTCCCCTCGCATTGCCTCGCCCTTCTCGCAGCTCCGCACTT
ACTCCGCCGCTGCCGATGAGCGCGTCGCTAAGTTCAAGGGTCAGAAGGAT
ACTGATGGAAAATACACTGTTACTCTGATCGAGGGTGATGGTATCGGTCC
CGAGATCTCCCAGTCGGTGAAGGATATCTTCGCTGCCGCAAACGCCCCTA
TCAAGTGGGAGCCCGTCGATGTTACTCCCATCCTGAAGGACGGCAAGACC
GCCATCCCCGACGACGCCATCAAGAGCGTCCAGAAGAACTACGTTGCGCT
CAAGGGTCCTCTTGCTACCCCCGTCGGCAAGGGACACGTCTCTCTGAACC
TGACCCTCCGTCGTACTTTCAACCTCTTCGCCAACGTCCGTCCCTGCCGC
TCCGTTGCCGGTTACAAGACCCCCTACGACAATGTCGACACCGTCCTGAT
CCGTGAGAACACCGAGGGTGAATACTCCGGCATTGAGCACGTCGTCGTCG
ACGGTGTTGTCCAGAGCATCAAGCTCATCACCAAGGAGGCCTCCGAGAGA
GTGCTCCGCTTCGCCTTCCAGTACGCTCGTTCCATCAACAAGAAGAAGGT
CCGTGTCGTGCACAAGGCCACCATCATGAAGATGTCCGACGGTCTCTTCC
TCAACCTTGCTCGTGACATTGCCAAGGAGTTCCCCGACGTCGAGTTCGAT
GCTGAGCTGCTGGACAACTCGTGCCTGAAGATCGTTACCGACCCCACCCC
CTACAACGACAAGGTCCTTGTCATGCCCAACCTGTATGGTGACATTCTGT
CCGATATGTGCGCCGGTCTGATCGGTGGTCTTGGTCTGACCCCCTCCGGT
AACATTGGTGACGAGTGCTCCATCTTCGAGGCTGTCCACGGTTCCGCCCC
CGACATTGCTGGCAAGGGTCTTGCCAACCCCACTGCTCTGCTTCTGAGCA
GTATCATGATGCTTCAGCACATGGGTCTGAATGAGCACGCCACTCGTATC
CAGAAGGCTACTTTCGACACCCTCGCCGAAGGAAAGGCCCTCACCGGTGA
CTTGGGTGGTTCCGCCAAGACCCACGAGTATGCTGAGGCCATCATGAAGC
GTCTGTAAATGATTGCCGCCAGGAACTTTGTCGCTCCCGCCCGTCAATGC
TTGCGGACAACACGTGTGTCCCCTCGCATTGCCTCGCCCTTCTCGCAGCT
CCGCACTTACTCCGCCGCTGCCGATGAGCGCGTCGCTAAGTTCAAGGGTC
AGAAGGATACTGATGGAAAATACACTGTTACTCTGATCGAGGGTGATGGT
ATCGGTCCCGAGATCTCCCAGTCGGTGAAGGATATCTTCGCTGCCGCAAA
CGCCCCTATCAAGTGGGAGCCCGTCGATGTTACTCCCATCCTGAAGGACG
GCAAGACCGCCATCCCCGACGACGCCATCAAGAGCGTCCAGAAGAACTAC
GTTGCGCTCAAGGGTCCTCTTGCTACCCCCGTCGGCAAGGGACACGTCTC
TCTGAACCTGACCCTCCGTCGTACTTTCAACCTCTTCGCCAACGTCCGTC
CCTGCCGCTCCGTTGCCGGTTACAAGACCCCCTACGACAATGTCGACACC
GTCCTGATCCGTGAGAACACCGAGGGTGAATACTCCGGCATTGAGCACGT
CGTCGTCGACGGTGTTGTCCAGAGCATCAAGCTCATCACCAAGGAGGCCT
CCGAGAGAGTGCTCCGCTTCGCCTTCCAGTACGCTCGTTCCATCAACAAG
AAGAAGGTCCGTGTCGTGCACAAGGCCACCATCATGAAGATGTCCGACGG
TCTCTTCCTCAACCTTGCTCGTGACATTGCCAAGGAGTTCCCCGACGTCG
AGTTCGATGCTGAGCTGCTGGACAACTCGTGCCTGAAGATCGTTACCGAC
CCCACCCCCTACAACGACAAGGTCCTTGTCATGCCCAACCTGTATGGTGA
CATTCTGTCCGATATGTGCGCCGGTCTGATCGGTGGTCTTGGTCTGACCC
CCTCCGGTAACATTGGTGACGAGTGCTCCATCTTCGAGGCTGTCCACGGT
TCCGCCCCCGACATTGCTGGCAAGGGTCTTGCCAACCCCACTGCTCTGCT
TCTGAGCAGTATCATGATGCTTCAGCACATGGGTCTGAATGAGCACGCCA
CTCGTATCCAGAAGGCTACTTTCGACACCCTCGCCGAAGGAAAGGCCCTC
ACCGGTGACTTGGGTGGTTCCGCCAAGACCCACGAGTATGCTGAGGCCAT
CATGAAGCGTCTGTAAATGATTGCCGCCAGGAACTTTGTCGCTCCCGCCC
GTCAATGCTTGCGGACAACACGTGTGTCCCCTCGCATTGCCTCGCCCTTC
TCGCAGCTCCGCACTTACTCCGCCGCTGCCGATGAGCGCGTCGCTAAGTT
CAAGGGTCAGAAGGATACTGATGGAAAATACACTGTTACTCTGATCGAGG
GTGATGGTATCGGTCCCGAGATCTCCCAGTCGGTGAAGGATATCTTCGCT
GCCGCAAACGCCCCTATCAAGTGGGAGCCCGTCGATGTTACTCCCATCCT
GAAGGACGGCAAGACCGCCATCCCCGACGACGCCATCAAGAGCGTCCAGA
AGAACTACGTTGCGCTCAAGGGTCCTCTTGCTACCCCCGTCGGCAAGGGA
CACGTCTCTCTGAACCTGACCCTCCGTCGTACTTTCAACCTCTTCGCCAA
CGTCCGTCCCTGCCGCTCCGTTGCCGGTTACAAGACCCCCTACGACAATG
TCGACACCGTCCTGATCCGTGAGAACACCGAGGGTGAATACTCCGGCATT
GAGCACGTCGTCGTCGACGGTGTTGTCCAGAGCATCAAGCTCATCACCAA
GGAGGCCTCCGAGAGAGTGCTCCGCTTCGCCTTCCAGTACGCTCGTTCCA
TCAACAAGAAGAAGGTCCGTGTCGTGCACAAGGCCACCATCATGAAGATG
TCCGACGGTCTCTTCCTCAACCTTGCTCGTGACATTGCCAAGGAGTTCCC
CGACGTCGAGTTCGATGCTGAGCTGCTGGACAACTCGTGCCTGAAGATCG
TTACCGACCCCACCCCCTACAACGACAAGGTCCTTGTCATGCCCAACCTG
TATGGTGACATTCTGTCCGATATGTGCGCCGGTCTGATCGGTGGTCTTGG
TCTGACCCCCTCCGGTAACATTGGTGACGAGTGCTCCATCTTCGAGGCTG
TCCACGGTTCCGCCCCCGACATTGCTGGCAAGGGTCTTGCCAACCCCACT
GCTCTGCTTCTGAGCAGTATCATGATGCTTCAGCACATGGGTCTGAATGA
GCACGCCACTCGTATCCAGAAGGCTACTTTCGACACCCTCGCCGAAGGAA
AGGCCCTCACCGGTGACTTGGGTGGTTCCGCCAAGACCCACGAGTATGCT
GAGGCCATCATGAAGCGTCTGTAAATGATTGCCGCCAGGAACTTTGTCGC
TCCCGCCCGTCAATGCTTGCGGACAACACGTGTGTCCCCTCGCATTGCCT
CGCCCTTCTCGCAGCTCCGCACTTACTCCGCCGCTGCCGATGAGCGCGTC
GCTAAGTTCAAGGGTCAGAAGGATACTGATGGAAAATACACTGTTACTCT
GATCGAGGGTGATGGTATCGGTCCCGAGATCTCCCAGTCGGTGAAGGATA
TCTTCGCTGCCGCAAACGCCCCTATCAAGTGGGAGCCCGTCGATGTTACT
CCCATCCTGAAGGACGGCAAGACCGCCATCCCCGACGACGCCATCAAGAG
CGTCCAGAAGAACTACGTTGCGCTCAAGGGTCCTCTTGCTACCCCCGTCG
GCAAGGGACACGTCTCTCTGAACCTGACCCTCCGTCGTACTTTCAACCTC
TTCGCCAACGTCCGTCCCTGCCGCTCCGTTGCCGGTTACAAGACCCCCTA
CGACAATGTCGACACCGTCCTGATCCGTGAGAACACCGAGGGTGAATACT
CCGGCATTGAGCACGTCGTCGTCGACGGTGTTGTCCAGAGCATCAAGCTC
ATCACCAAGGAGGCCTCCGAGAGAGTGCTCCGCTTCGCCTTCCAGTACGC
TCGTTCCATCAACAAGAAGAAGGTCCGTGTCGTGCACAAGGCCACCATCA
TGAAGATGTCCGACGGTCTCTTCCTCAACCTTGCTCGTGACATTGCCAAG
GAGTTCCCCGACGTCGAGTTCGATGCTGAGCTGCTGGACAACTCGTGCCT
GAAGATCGTTACCGACCCCACCCCCTACAACGACAAGGTCCTTGTCATGC
CCAACCTGTATGGTGACATTCTGTCCGATATGTGCGCCGGTCTGATCGGT
GGTCTTGGTCTGACCCCCTCCGGTAACATTGGTGACGAGTGCTCCATCTT
CGAGGCTGTCCACGGTTCCGCCCCCGACATTGCTGGCAAGGGTCTTGCCA
ACCCCACTGCTCTGCTTCTGAGCAGTATCATGATGCTTCAGCACATGGGT
CTGAATGAGCACGCCACTCGTATCCAGAAGGCTACTTTCGACACCCTCGC
CGAAGGAAAGGCCCTCACCGGTGACTTGGGTGGTTCCGCCAAGACCCACG
AGTATGCTGAGGCCATCATGAAGCGTCTGTAAATGATTGCCGCCAGGAAC
TTTGTCGCTCCCGCCCGTCAATGCTTGCGGACAACACGTGTGTCCCCTCG
CATTGCCTCGCCCTTCTCGCAGCTCCGCACTTACTCCGCCGCTGCCGATG
AGCGCGTCGCTAAGTTCAAGGGTCAGAAGGATACTGATGGAAAATACACT
GTTACTCTGATCGAGGGTGATGGTATCGGTCCCGAGATCTCCCAGTCGGT
GAAGGATATCTTCGCTGCCGCAAACGCCCCTATCAAGTGGGAGCCCGTCG
ATGTTACTCCCATCCTGAAGGACGGCAAGACCGCCATCCCCGACGACGCC
ATCAAGAGCGTCCAGAAGAACTACGTTGCGCTCAAGGGTCCTCTTGCTAC
CCCCGTCGGCAAGGGACACGTCTCTCTGAACCTGACCCTCCGTCGTACTT
TCAACCTCTTCGCCAACGTCCGTCCCTGCCGCTCCGTTGCCGGTTACAAG
ACCCCCTACGACAATGTCGACACCGTCCTGATCCGTGAGAACACCGAGGG
TGAATACTCCGGCATTGAGCACGTCGTCGTCGACGGTGTTGTCCAGAGCA
TCAAGCTCATCACCAAGGAGGCCTCCGAGAGAGTGCTCCGCTTCGCCTTC
CAGTACGCTCGTTCCATCAACAAGAAGAAGGTCCGTGTCGTGCACAAGGC
CACCATCATGAAGATGTCCGACGGTCTCTTCCTCAACCTTGCTCGTGACA
TTGCCAAGGAGTTCCCCGACGTCGAGTTCGATGCTGAGCTGCTGGACAAC
TCGTGCCTGAAGATCGTTACCGACCCCACCCCCTACAACGACAAGGTCCT
TGTCATGCCCAACCTGTATGGTGACATTCTGTCCGATATGTGCGCCGGTC
TGATCGGTGGTCTTGGTCTGACCCCCTCCGGTAACATTGGTGACGAGTGC
TCCATCTTCGAGGCTGTCCACGGTTCCGCCCCCGACATTGCTGGCAAGGG
TCTTGCCAACCCCACTGCTCTGCTTCTGAGCAGTATCATGATGCTTCAGC
ACATGGGTCTGAATGAGCACGCCACTCGTATCCAGAAGGCTACTTTCGAC
ACCCTCGCCGAAGGAAAGGCCCTCACCGGTGACTTGGGTGGTTCCGCCAA
GACCCACGAGTATGCTGAGGCCATCATGAAGCGTCTGTAAATGATTGCCG
CCAGGAACTTTGTCGCTCCCGCCCGTCAATGCTTGCGGACAACACGTGTG
TCCCCTCGCATTGCCTCGCCCTTCTCGCAGCTCCGCACTTACTCCGCCGC
TGCCGATGAGCGCGTCGCTAAGTTCAAGGGTCAGAAGGATACTGATGGAA
AATACACTGTTACTCTGATCGAGGGTGATGGTATCGGTCCCGAGATCTCC
CAGTCGGTGAAGGATATCTTCGCTGCCGCAAACGCCCCTATCAAGTGGGA
GCCCGTCGATGTTACTCCCATCCTGAAGGACGGCAAGACCGCCATCCCCG
ACGACGCCATCAAGAGCGTCCAGAAGAACTACGTTGCGCTCAAGGGTCCT
CTTGCTACCCCCGTCGGCAAGGGACACGTCTCTCTGAACCTGACCCTCCG
TCGTACTTTCAACCTCTTCGCCAACGTCCGTCCCTGCCGCTCCGTTGCCG
GTTACAAGACCCCCTACGACAATGTCGACACCGTCCTGATCCGTGAGAAC
ACCGAGGGTGAATACTCCGGCATTGAGCACGTCGTCGTCGACGGTGTTGT
CCAGAGCATCAAGCTCATCACCAAGGAGGCCTCCGAGAGAGTGCTCCGCT
TCGCCTTCCAGTACGCTCGTTCCATCAACAAGAAGAAGGTCCGTGTCGTG
CACAAGGCCACCATCATGAAGATGTCCGACGGTCTCTTCCTCAACCTTGC
TCGTGACATTGCCAAGGAGTTCCCCGACGTCGAGTTCGATGCTGAGCTGC
TGGACAACTCGTGCCTGAAGATCGTTACCGACCCCACCCCCTACAACGAC
AAGGTCCTTGTCATGCCCAACCTGTATGGTGACATTCTGTCCGATATGTG
CGCCGGTCTGATCGGTGGTCTTGGTCTGACCCCCTCCGGTAACATTGGTG
ACGAGTGCTCCATCTTCGAGGCTGTCCACGGTTCCGCCCCCGACATTGCT
GGCAAGGGTCTTGCCAACCCCACTGCTCTGCTTCTGAGCAGTATCATGAT
GCTTCAGCACATGGGTCTGAATGAGCACGCCACTCGTATCCAGAAGGCTA
CTTTCGACACCCTCGCCGAAGGAAAGGCCCTCACCGGTGACTTGGGTGGT
TCCGCCAAGACCCACGAGTATGCTGAGGCCATCATGAAGCGTCTGTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0051287NAD binding
GO:0000287magnesium ion binding
GO:0004449isocitrate dehydrogenase (NAD+) activity
GO:0016616oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
Vocabulary: Biological Process
TermDefinition
GO:0006099tricarboxylic acid cycle
GO:0055114oxidation-reduction process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
IDH2ASPNIDRAFT_208051Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_208051-T1ASPNIDRAFT_208051-T1-proteinAspergillus niger ATCC 1015polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_208051-T1.utr5p1ASPNIDRAFT_208051-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_208051-T1.exon1ASPNIDRAFT_208051-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_208051-T1.exon2ASPNIDRAFT_208051-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_208051-T1.exon3ASPNIDRAFT_208051-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_208051-T1.exon4ASPNIDRAFT_208051-T1.exon4Aspergillus niger ATCC 1015exon
ASPNIDRAFT_208051-T1.exon5ASPNIDRAFT_208051-T1.exon5Aspergillus niger ATCC 1015exon
ASPNIDRAFT_208051-T1.exon6ASPNIDRAFT_208051-T1.exon6Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_208051-T1.cdsASPNIDRAFT_208051-T1.cdsAspergillus niger ATCC 1015CDS


Properties
Property NameValue
DBxrefInterPro:IPR019818
DBxrefInterPro:IPR004434
DBxrefInterPro:IPR024084
DBxrefPFAM:PF00180
ProductNAD-dependent isocitrate dehydrogenase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000021.1supercontigACJE01000021.1:1343253..1344864 +
Powered by Drupal