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ASPNIDRAFT_125744-T1, ASPNIDRAFT_125744-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_125744-T1
Unique NameASPNIDRAFT_125744-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000021.1:1672303..1673200+

Legend: exonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_125744-T1 ID=ASPNIDRAFT_125744-T1|Name=ASPNIDRAFT_125744-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=898bp|location=Sequence derived from alignment at ACJE01000021.1:1672303..1673200+ (Aspergillus niger ATCC 1015)
CTCCGGTCCCTGCGACGTCAACCACCACGAAGACACCTCTCCTCCACCCC
CCGCAACGCTGAACCTCACCATAACCCCGTCCCTGAGAAACATCACACTC
CCTCGAACAACCCACAGCCGGCTCCCACAGTGCCTGGCCCGGTCGCATCG
ACCACCGCCGCCCCCGGGTCGGTATCCGCATCGCGAGCACTCATCCAGAG
AATCCAGGCCGGTCCGGTAGGACGAGTGGCGCGAGCGTATGCGCGCGTGC
AGGAGAGACGACCCTACCGGACACAAGTGATCAGTACGATTGTGGTGTAT
CTGTGTGGTGATTTGGGGGCGCAGTTGTTGTTTCCGCCGGATAATGGTTC
ACCCCAGGATGTGCAAGCAGGTGATCAGAAGCAAGAAGCAGGAAATAATG
CCGGAGGAATTGGAGGAGGGTATGATCCGTGGAGGACGGTGCGCCATTTA
ACAGTAGGAGTGGGGAGTGCAATCCCGACGTATAAATGGTGAGTGTCGCA
GTGTATGGTGGGGATGTCTATGTGATGATGGCTAATACGAAGGGAGATTT
AGGTTCATGTTCCTGCACAACAACTTCAACTTCTCGTCCAAGTTCCTCTC
TATCCTTACCAAGGTCTGCGTGCAACAGGCGGTGTTCACTCCCGTGTTCA
ATACCTATTTCTTTGGTCTGCAGTCGTTGATGACGGGCAAGTCGTTGGAG
GAGACTTTTGAACGGCTCAAGGTCGCTTTGCCGACGAGTATCTCGAACAG
CGTGAAGCTGTGGCCGGCTGTCACGGCTTTCAGCTTCATGTATGTGGCGC
CTCAATTCCGGAGTATCTTTTCCGGAGTCATTGCTGTTGGGTGGCAGACG
TATCTGAGCTGGTTGAATCAGAAGGCGGCGCGCAAGGTCGAGGCGGAA
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Coding sequence (CDS) from alignment at ACJE01000021.1:1672303..1673200+

>ASPNIDRAFT_125744-T1 ID=ASPNIDRAFT_125744-T1|Name=ASPNIDRAFT_125744-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1664bp|location=Sequence derived from alignment at ACJE01000021.1:1672303..1673200+ (Aspergillus niger ATCC 1015)
CTCCGGTCCCTGCGACGTCAACCACCACGAAGACACCTCTCCTCCACCCC
CCGCAACGCTGAACCTCACCATAACCCCGTCCCTGAGAAACATCACACTC
CCTCGAACAACCCACAGCCGGCTCCCACAGTGCCTGGCCCGGTCGCATCG
ACCACCGCCGCCCCCGGGTCGGTATCCGCATCGCGAGCACTCATCCAGAG
AATCCAGGCCGGTCCGGTAGGACGAGTGGCGCGAGCGTATGCGCGCGTGC
AGGAGAGACGACCCTACCGGACACAAGTGATCAGTACGATTGTGGTGTAT
CTGTGTGGTGATTTGGGGGCGCAGTTGTTGTTTCCGCCGGATAATGGTTC
ACCCCAGGATGTGCAAGCAGGTGATCAGAAGCAAGAAGCAGGAAATAATG
CCGGAGGAATTGGAGGAGGGTATGATCCGTGGAGGACGGTGCGCCATTTA
ACAGTAGGAGTGGGGAGTGCAATCCCGACGTATAAATGGTTCATGTTCCT
GCACAACAACTTCAACTTCTCGTCCAAGTTCCTCTCTATCCTTACCAAGG
TCTGCGTGCAACAGGCGGTGTTCACTCCCGTGTTCAATACCTATTTCTTT
GGTCTGCAGTCGTTGATGACGGGCAAGTCGTTGGAGGAGACTTTTGAACG
GCTCAAGGTCGCTTTGCCGACGAGTATCTCGAACAGCGTGAAGCTGTGGC
CGGCTGTCACGGCTTTCAGCTTCATGTATGTGGCGCCTCAATTCCGGAGT
ATCTTTTCCGGAGTCATTGCTGTTGGGTGGCAGACGTATCTGAGCTGGTT
GAATCAGAAGGCGGCGCGCAAGGTCGAGGCGGCTCCGGTCCCTGCGACGT
CAACCACCACGAAGACACCTCTCCTCCACCCCCCGCAACGCTGAACCTCA
CCATAACCCCGTCCCTGAGAAACATCACACTCCCTCGAACAACCCACAGC
CGGCTCCCACAGTGCCTGGCCCGGTCGCATCGACCACCGCCGCCCCCGGG
TCGGTATCCGCATCGCGAGCACTCATCCAGAGAATCCAGGCCGGTCCGGT
AGGACGAGTGGCGCGAGCGTATGCGCGCGTGCAGGAGAGACGACCCTACC
GGACACAAGTGATCAGTACGATTGTGGTGTATCTGTGTGGTGATTTGGGG
GCGCAGTTGTTGTTTCCGCCGGATAATGGTTCACCCCAGGATGTGCAAGC
AGGTGATCAGAAGCAAGAAGCAGGAAATAATGCCGGAGGAATTGGAGGAG
GGTATGATCCGTGGAGGACGGTGCGCCATTTAACAGTAGGAGTGGGGAGT
GCAATCCCGACGTATAAATGGTTCATGTTCCTGCACAACAACTTCAACTT
CTCGTCCAAGTTCCTCTCTATCCTTACCAAGGTCTGCGTGCAACAGGCGG
TGTTCACTCCCGTGTTCAATACCTATTTCTTTGGTCTGCAGTCGTTGATG
ACGGGCAAGTCGTTGGAGGAGACTTTTGAACGGCTCAAGGTCGCTTTGCC
GACGAGTATCTCGAACAGCGTGAAGCTGTGGCCGGCTGTCACGGCTTTCA
GCTTCATGTATGTGGCGCCTCAATTCCGGAGTATCTTTTCCGGAGTCATT
GCTGTTGGGTGGCAGACGTATCTGAGCTGGTTGAATCAGAAGGCGGCGCG
CAAGGTCGAGGCGG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_125744ASPNIDRAFT_125744Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_125744-T1.exon1ASPNIDRAFT_125744-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_125744-T1.exon2ASPNIDRAFT_125744-T1.exon2Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_125744-T1.cdsASPNIDRAFT_125744-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_125744-T1.utr3p1ASPNIDRAFT_125744-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_125744-T1ASPNIDRAFT_125744-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR007248
DBxrefPFAM:PF04117
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000021.1supercontigACJE01000021.1:1672303..1673200 +
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