You are here

Home

CBS51388_000251-T1, CBS51388_000251-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_000251-T1
Unique NameCBS51388_000251-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An01:688177..689663+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_000251-T1 ID=CBS51388_000251-T1|Name=CBS51388_000251-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1487bp|location=Sequence derived from alignment at An01:688177..689663+ (Aspergillus niger CBS 513.88)
ATGCCGACTCCGCCCGGCGTGGGGAACAACCACTTAAGTGCTTCTCCTCA
CCCCAACAACGCACCCCCGTACAATGCAGGCATTGTCACAACGATTCCAC
TGAGCCACCCAGTCTCAATGGCCACTCGTATCCTCCGTTCTCTTCCCAAT
AGCCGTCTTCTATCGCGGCGCGCCTTCTCCAGCACCGCCGCCTCCAAGGC
CGACGTCACACATGCGGTAACTAATTCCTACCAGCACCCATCCATCTACA
TTCTCGACTCAGACACAAACAGCAATCTAACACATCACTGTTAAGGTTAT
AGGCGCAGGGGTCGTCGGACTGGCAGTTGCACGCCAACTCGCCATGAAGG
AGGGCACATCGACGATCCTACTCGAGAGACATGAAGCGCCGGGGACGGAG
ACGAGTAGTCGCAATTCAGAGGTACCATTCCAGATTTCGATTATGCCAAT
ACGATTATACTCTCATGAATAAAGCTAAGCAATCTTTTTATAAATAGGTC
ATCCATGCAGGCCTCTACTACGGCACCGACACCCTCAAAACCACCCTCTG
CATCAAAGGCAAAGAGCTCCTCTACGCACTCTGCGCCCAACACAACATCC
CGCACCGCAACACCAAGAAATGGATCGTCGCCCAAACCCCAGAACAATGG
GAAGCCTGTCTCCGCGTCCACGAACACGCCAAACGAATCGGCGTGCCCAC
ACGCATCCTAGGGCAGGATGAAGCGCGCCGGCGCGAACCCGAAGTGCGCG
CCCTCGCAGGCATCGTGGAGAGCCCGACAACCGGCATCATTGACAGCCAT
TCCCTGATGACCTATCTACAGGGGGATTTCGAAGACCGCGGAGGGGATTG
TGCGTTCATGACGAAGGTGACGGGCATTGAACCCGTTGCTGCCAGCGAAG
GTGGCGGATACCGGATTAGCGCAGTATCAGCGGACGGAAGCGAAACGACC
ATCACGGCCGAGACGGTGATAAACAGTGCAGGCAATGGGGCATGTGCGAT
CAATAACATGGTGTTACCGGCTGAGCGGCATCGCAAAGCGTATTTTGCCA
AGGGAACGTATTTCTCTTACTCGGCTTCAACGCCGAAGACGTCGGTGCTG
GTGTATCCGGCTACGTTGCCGGGCACGGGCGGTCTGGGCACCCATTTGAC
CCTTGATATGGGTGGCAGGATCCGGTTTGGGCCGGATGTCGAGTGGGTGG
AGGACCCGAATGATTTGAAGCCGAGTCCGACGCGGCTGCAGCAGGCGTTA
CCGGAGATTAGAGCGTATTTGCCTAATGTGGATGTTGAGGCGATTGATCT
AGACTATTGTGGGATCCGGCCTAAGTTGGGGAAGGGAGGGGCGGTCAATA
CGGGCAAGGGGTTTCATGATTTTGTGATTCAGGAGGAGGAAGGGTTTCCA
GGGTTTGTAAATTTGTTGGGAATTGAGAGTCCGGGGCTGACGAGTTGTTT
GGCGATCGGGGAGAGGGTGAGGGATATCTTGTACTGA
back to top

Coding sequence (CDS) from alignment at An01:688177..689663+

>CBS51388_000251-T1 ID=CBS51388_000251-T1|Name=CBS51388_000251-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3996bp|location=Sequence derived from alignment at An01:688177..689663+ (Aspergillus niger CBS 513.88)
ATGCCGACTCCGCCCGGCGTGGGGAACAACCACTTAAGTGCTTCTCCTCA
CCCCAACAACGCACCCCCGTACAATGCAGGCATTGTCACAACGATTCCAC
TGAGCCACCCAGTCTCAATGGCCACTCGTATCCTCCGTTCTCTTCCCAAT
AGCCGTCTTCTATCGCGGCGCGCCTTCTCCAGCACCGCCGCCTCCAAGGC
CGACGTCACACATGCGGTTATAGGCGCAGGGGTCGTCGGACTGGCAGTTG
CACGCCAACTCGCCATGAAGGAGGGCACATCGACGATCCTACTCGAGAGA
CATGAAGCGCCGGGGACGGAGACGAGTAGTCGCAATTCAGAGGTCATCCA
TGCAGGCCTCTACTACGGCACCGACACCCTCAAAACCACCCTCTGCATCA
AAGGCAAAGAGCTCCTCTACGCACTCTGCGCCCAACACAACATCCCGCAC
CGCAACACCAAGAAATGGATCGTCGCCCAAACCCCAGAACAATGGGAAGC
CTGTCTCCGCGTCCACGAACACGCCAAACGAATCGGCGTGCCCACACGCA
TCCTAGGGCAGGATGAAGCGCGCCGGCGCGAACCCGAAGTGCGCGCCCTC
GCAGGCATCGTGGAGAGCCCGACAACCGGCATCATTGACAGCCATTCCCT
GATGACCTATCTACAGGGGGATTTCGAAGACCGCGGAGGGGATTGTGCGT
TCATGACGAAGGTGACGGGCATTGAACCCGTTGCTGCCAGCGAAGGTGGC
GGATACCGGATTAGCGCAGTATCAGCGGACGGAAGCGAAACGACCATCAC
GGCCGAGACGGTGATAAACAGTGCAGGCAATGGGGCATGTGCGATCAATA
ACATGGTGTTACCGGCTGAGCGGCATCGCAAAGCGTATTTTGCCAAGGGA
ACGTATTTCTCTTACTCGGCTTCAACGCCGAAGACGTCGGTGCTGGTGTA
TCCGGCTACGTTGCCGGGCACGGGCGGTCTGGGCACCCATTTGACCCTTG
ATATGGGTGGCAGGATCCGGTTTGGGCCGGATGTCGAGTGGGTGGAGGAC
CCGAATGATTTGAAGCCGAGTCCGACGCGGCTGCAGCAGGCGTTACCGGA
GATTAGAGCGTATTTGCCTAATGTGGATGTTGAGGCGATTGATCTAGACT
ATTGTGGGATCCGGCCTAAGTTGGGGAAGGGAGGGGCGGTCAATACGGGC
AAGGGGTTTCATGATTTTGTGATTCAGGAGGAGGAAGGGTTTCCAGGGTT
TGTAAATTTGTTGGGAATTGAGAGTCCGGGGCTGACGAGTTGTTTGGCGA
TCGGGGAGAGGGTGAGGGATATCTTGTACTGAATGCCGACTCCGCCCGGC
GTGGGGAACAACCACTTAAGTGCTTCTCCTCACCCCAACAACGCACCCCC
GTACAATGCAGGCATTGTCACAACGATTCCACTGAGCCACCCAGTCTCAA
TGGCCACTCGTATCCTCCGTTCTCTTCCCAATAGCCGTCTTCTATCGCGG
CGCGCCTTCTCCAGCACCGCCGCCTCCAAGGCCGACGTCACACATGCGGT
TATAGGCGCAGGGGTCGTCGGACTGGCAGTTGCACGCCAACTCGCCATGA
AGGAGGGCACATCGACGATCCTACTCGAGAGACATGAAGCGCCGGGGACG
GAGACGAGTAGTCGCAATTCAGAGGTCATCCATGCAGGCCTCTACTACGG
CACCGACACCCTCAAAACCACCCTCTGCATCAAAGGCAAAGAGCTCCTCT
ACGCACTCTGCGCCCAACACAACATCCCGCACCGCAACACCAAGAAATGG
ATCGTCGCCCAAACCCCAGAACAATGGGAAGCCTGTCTCCGCGTCCACGA
ACACGCCAAACGAATCGGCGTGCCCACACGCATCCTAGGGCAGGATGAAG
CGCGCCGGCGCGAACCCGAAGTGCGCGCCCTCGCAGGCATCGTGGAGAGC
CCGACAACCGGCATCATTGACAGCCATTCCCTGATGACCTATCTACAGGG
GGATTTCGAAGACCGCGGAGGGGATTGTGCGTTCATGACGAAGGTGACGG
GCATTGAACCCGTTGCTGCCAGCGAAGGTGGCGGATACCGGATTAGCGCA
GTATCAGCGGACGGAAGCGAAACGACCATCACGGCCGAGACGGTGATAAA
CAGTGCAGGCAATGGGGCATGTGCGATCAATAACATGGTGTTACCGGCTG
AGCGGCATCGCAAAGCGTATTTTGCCAAGGGAACGTATTTCTCTTACTCG
GCTTCAACGCCGAAGACGTCGGTGCTGGTGTATCCGGCTACGTTGCCGGG
CACGGGCGGTCTGGGCACCCATTTGACCCTTGATATGGGTGGCAGGATCC
GGTTTGGGCCGGATGTCGAGTGGGTGGAGGACCCGAATGATTTGAAGCCG
AGTCCGACGCGGCTGCAGCAGGCGTTACCGGAGATTAGAGCGTATTTGCC
TAATGTGGATGTTGAGGCGATTGATCTAGACTATTGTGGGATCCGGCCTA
AGTTGGGGAAGGGAGGGGCGGTCAATACGGGCAAGGGGTTTCATGATTTT
GTGATTCAGGAGGAGGAAGGGTTTCCAGGGTTTGTAAATTTGTTGGGAAT
TGAGAGTCCGGGGCTGACGAGTTGTTTGGCGATCGGGGAGAGGGTGAGGG
ATATCTTGTACTGAATGCCGACTCCGCCCGGCGTGGGGAACAACCACTTA
AGTGCTTCTCCTCACCCCAACAACGCACCCCCGTACAATGCAGGCATTGT
CACAACGATTCCACTGAGCCACCCAGTCTCAATGGCCACTCGTATCCTCC
GTTCTCTTCCCAATAGCCGTCTTCTATCGCGGCGCGCCTTCTCCAGCACC
GCCGCCTCCAAGGCCGACGTCACACATGCGGTTATAGGCGCAGGGGTCGT
CGGACTGGCAGTTGCACGCCAACTCGCCATGAAGGAGGGCACATCGACGA
TCCTACTCGAGAGACATGAAGCGCCGGGGACGGAGACGAGTAGTCGCAAT
TCAGAGGTCATCCATGCAGGCCTCTACTACGGCACCGACACCCTCAAAAC
CACCCTCTGCATCAAAGGCAAAGAGCTCCTCTACGCACTCTGCGCCCAAC
ACAACATCCCGCACCGCAACACCAAGAAATGGATCGTCGCCCAAACCCCA
GAACAATGGGAAGCCTGTCTCCGCGTCCACGAACACGCCAAACGAATCGG
CGTGCCCACACGCATCCTAGGGCAGGATGAAGCGCGCCGGCGCGAACCCG
AAGTGCGCGCCCTCGCAGGCATCGTGGAGAGCCCGACAACCGGCATCATT
GACAGCCATTCCCTGATGACCTATCTACAGGGGGATTTCGAAGACCGCGG
AGGGGATTGTGCGTTCATGACGAAGGTGACGGGCATTGAACCCGTTGCTG
CCAGCGAAGGTGGCGGATACCGGATTAGCGCAGTATCAGCGGACGGAAGC
GAAACGACCATCACGGCCGAGACGGTGATAAACAGTGCAGGCAATGGGGC
ATGTGCGATCAATAACATGGTGTTACCGGCTGAGCGGCATCGCAAAGCGT
ATTTTGCCAAGGGAACGTATTTCTCTTACTCGGCTTCAACGCCGAAGACG
TCGGTGCTGGTGTATCCGGCTACGTTGCCGGGCACGGGCGGTCTGGGCAC
CCATTTGACCCTTGATATGGGTGGCAGGATCCGGTTTGGGCCGGATGTCG
AGTGGGTGGAGGACCCGAATGATTTGAAGCCGAGTCCGACGCGGCTGCAG
CAGGCGTTACCGGAGATTAGAGCGTATTTGCCTAATGTGGATGTTGAGGC
GATTGATCTAGACTATTGTGGGATCCGGCCTAAGTTGGGGAAGGGAGGGG
CGGTCAATACGGGCAAGGGGTTTCATGATTTTGTGATTCAGGAGGAGGAA
GGGTTTCCAGGGTTTGTAAATTTGTTGGGAATTGAGAGTCCGGGGCTGAC
GAGTTGTTTGGCGATCGGGGAGAGGGTGAGGGATATCTTGTACTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_000251CBS51388_000251Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_000251-T1.exon1CBS51388_000251-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_000251-T1.exon2CBS51388_000251-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_000251-T1.exon3CBS51388_000251-T1.exon3Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_000251-T1.cdsCBS51388_000251-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_000251-T1CBS51388_000251-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036188
DBxrefInterPro:IPR006076
DBxrefPFAM:PF01266
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An01supercontigAn01:688177..689663 +
Powered by Drupal