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Sequences
The following sequences are available for this feature:
mRNA from alignment at An01:1260266..1261097+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_000420-T1 ID=CBS51388_000420-T1|Name=CBS51388_000420-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=832bp|location=Sequence derived from alignment at An01:1260266..1261097+ (Aspergillus niger CBS 513.88)
ATGGCGGACGCTCAATTCGATAGTGCGCTGTAAGTGTTATGGCTCTGTTT
TTGTTTCAAGACTATGAAGCCTGCATAGCCTCTGGGTGCAATCATTCCAC
GCGGTCAACCCCGCTTGTTGCCTCCCGCTGACTATCATACCTGCTTCCAG
GGACCTGCTCCGGCGCCTCAACCCCCGCGACACGAAGCAAAACCTCCAGG
CAATCACCTCCATCGTTCCCGACCTGACCGAAGACCTGCTCTCCTCTGTC
GATCAGCCTCTAGAAATCCGCAAGTGCCCCAAGACAGACCGCGACTACCT
CCTCTGTGACTACAACCGCGACGGAGATAGCTATCGGTCGCCCTGGAGCA
ATGAATTCGATCCCCCGTTGGAAGACGGAACTGTTCCCAGTGAAAGAGTG
AGAAAGCTTGAGGTCGCCGCCAACGAGGCTTTCGATGTCTACCGGGAGCT
GTACTACGAGGGTGGAGTAGGCAGCGTGTACTTTTGGGACTTGGACGATG
GATTCGCTGGCGTTATCCTATTGAAGAAGGGTGAGCGAGTGATGTCTTGA
TACTTTCAGGCTGGAAATACGTGCTGATATCTCGCCATTATAGGAGTTAC
GCCAGGTGCTAAGAGCTCTGGGGAGTGGGACAGTATCCACGTCTTCGAGG
CTACCGACAGAGCGCGCATGTCCCACTACAAGCTGACTAGCACCGTCATC
CTGCACTTGGCTAATGAAACTGAGGCTTTGGGTGAGATGGACCTGAGTGG
TAACATGACCCGCCAAGGTGGAGGTGGATCTTCCCGTCGAGTCGGATGCG
AGCCACGTCGCCAATGTTGGTCGACTTGTTGA back to topCoding sequence (CDS) from alignment at An01:1260266..1261097+ >CBS51388_000420-T1 ID=CBS51388_000420-T1|Name=CBS51388_000420-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1944bp|location=Sequence derived from alignment at An01:1260266..1261097+ (Aspergillus niger CBS 513.88)
ATGGCGGACGCTCAATTCGATAGTGCGCTGGACCTGCTCCGGCGCCTCAA
CCCCCGCGACACGAAGCAAAACCTCCAGGCAATCACCTCCATCGTTCCCG
ACCTGACCGAAGACCTGCTCTCCTCTGTCGATCAGCCTCTAGAAATCCGC
AAGTGCCCCAAGACAGACCGCGACTACCTCCTCTGTGACTACAACCGCGA
CGGAGATAGCTATCGGTCGCCCTGGAGCAATGAATTCGATCCCCCGTTGG
AAGACGGAACTGTTCCCAGTGAAAGAGTGAGAAAGCTTGAGGTCGCCGCC
AACGAGGCTTTCGATGTCTACCGGGAGCTGTACTACGAGGGTGGAGTAGG
CAGCGTGTACTTTTGGGACTTGGACGATGGATTCGCTGGCGTTATCCTAT
TGAAGAAGGGAGTTACGCCAGGTGCTAAGAGCTCTGGGGAGTGGGACAGT
ATCCACGTCTTCGAGGCTACCGACAGAGCGCGCATGTCCCACTACAAGCT
GACTAGCACCGTCATCCTGCACTTGGCTAATGAAACTGAGGCTTTGGGTG
AGATGGACCTGAGTGGTAACATGACCCGCCAAGGTGGAGGTGGATCTTCC
CGTCGAGTCGGATGCGAGCCACGTCGCCAATGTTGGTCGACTTGTTGAAT
GGCGGACGCTCAATTCGATAGTGCGCTGGACCTGCTCCGGCGCCTCAACC
CCCGCGACACGAAGCAAAACCTCCAGGCAATCACCTCCATCGTTCCCGAC
CTGACCGAAGACCTGCTCTCCTCTGTCGATCAGCCTCTAGAAATCCGCAA
GTGCCCCAAGACAGACCGCGACTACCTCCTCTGTGACTACAACCGCGACG
GAGATAGCTATCGGTCGCCCTGGAGCAATGAATTCGATCCCCCGTTGGAA
GACGGAACTGTTCCCAGTGAAAGAGTGAGAAAGCTTGAGGTCGCCGCCAA
CGAGGCTTTCGATGTCTACCGGGAGCTGTACTACGAGGGTGGAGTAGGCA
GCGTGTACTTTTGGGACTTGGACGATGGATTCGCTGGCGTTATCCTATTG
AAGAAGGGAGTTACGCCAGGTGCTAAGAGCTCTGGGGAGTGGGACAGTAT
CCACGTCTTCGAGGCTACCGACAGAGCGCGCATGTCCCACTACAAGCTGA
CTAGCACCGTCATCCTGCACTTGGCTAATGAAACTGAGGCTTTGGGTGAG
ATGGACCTGAGTGGTAACATGACCCGCCAAGGTGGAGGTGGATCTTCCCG
TCGAGTCGGATGCGAGCCACGTCGCCAATGTTGGTCGACTTGTTGAATGG
CGGACGCTCAATTCGATAGTGCGCTGGACCTGCTCCGGCGCCTCAACCCC
CGCGACACGAAGCAAAACCTCCAGGCAATCACCTCCATCGTTCCCGACCT
GACCGAAGACCTGCTCTCCTCTGTCGATCAGCCTCTAGAAATCCGCAAGT
GCCCCAAGACAGACCGCGACTACCTCCTCTGTGACTACAACCGCGACGGA
GATAGCTATCGGTCGCCCTGGAGCAATGAATTCGATCCCCCGTTGGAAGA
CGGAACTGTTCCCAGTGAAAGAGTGAGAAAGCTTGAGGTCGCCGCCAACG
AGGCTTTCGATGTCTACCGGGAGCTGTACTACGAGGGTGGAGTAGGCAGC
GTGTACTTTTGGGACTTGGACGATGGATTCGCTGGCGTTATCCTATTGAA
GAAGGGAGTTACGCCAGGTGCTAAGAGCTCTGGGGAGTGGGACAGTATCC
ACGTCTTCGAGGCTACCGACAGAGCGCGCATGTCCCACTACAAGCTGACT
AGCACCGTCATCCTGCACTTGGCTAATGAAACTGAGGCTTTGGGTGAGAT
GGACCTGAGTGGTAACATGACCCGCCAAGGTGGAGGTGGATCTTCCCGTC
GAGTCGGATGCGAGCCACGTCGCCAATGTTGGTCGACTTGTTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005737 | cytoplasm |
| GO:0008290 | F-actin capping protein complex |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003779 | actin binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0030036 | actin cytoskeleton organization |
| GO:0051016 | barbed-end actin filament capping |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR037282 |
| DBxref | InterPro:IPR019771 |
| DBxref | InterPro:IPR043175 |
| DBxref | InterPro:IPR042276 |
| DBxref | InterPro:IPR001698 |
| DBxref | PFAM:PF01115 |
| Product | F-actin-capping protein subunit beta |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An01 | supercontig | An01:1260266..1261097 + |
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