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Sequences
The following sequences are available for this feature:
mRNA from alignment at An01:2769004..2771061- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_000945-T1 ID=CBS51388_000945-T1|Name=CBS51388_000945-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2058bp|location=Sequence derived from alignment at An01:2769004..2771061- (Aspergillus niger CBS 513.88)
ATGGCCGGTCATATCGTCGATGCTATCCAGGAGATCCTGTCTTCTGTCTG
TCACAGCTGGAAGGGCAAGGTCAAGGACCTGTATCTCCTCTCCCGAGCCA
GTCGCGAGCAAATTCTATCCTGGAACACCCAGTCGCTGGAAGTGAGCCAG
CAATGCCTCCCGGACCTGATTGACCGCGCCAGTAGCCAGTATTCCGACGC
CATTGCCTGCTGCGGTATCAGCGAGCAGTTCACCTACCGCGAGCTTAAGC
ATTTCTCCACGGCCTTGTCGGCCTATCTCCTCGCCGCGGGCGTGCGTCCC
CGCACCTACGTCGGACTGATCCTCGACAAGACCATCTGGTCCGTGGTCAT
CATGCTGGCCGTGCTGCGGACGGGGGCGGCCTGCATGCCCCTGGATGGGG
CATTACCTCCAGTCCAGGTCTCAACCATGCTCTGTGAGGCCAGTACATCC
GTCATCCTCACCACCTCCTCGTCCTCCAAACTCGCACCACACTGGGAAGG
CTCAGTGCCCCAGATGCTGGAAATCTCGGGGAAACTGATCCAGCAGTTGC
CGGTGAAGGGACTACCAGCGTCATCCGCACATATTCCCCCATCGCAACCG
GCATTTCTCATGTACACGTCAGGCAGCACCGGAGCCCCCAAGGGCGTGAT
ACAGCCACACCAAGACGTAGTGACGTGCGTGCAACAGATGGCTCAAGCGT
TGAAGCTACACTCCGGCACTCGATTCCTCCAATTCGCCGCATTCAGCTTC
GACCTCAGCTGCGTGGAGACCTTGTGCACCTTATCCCGCGGCGGGTGTGT
CTGCATGCCGGGGAACGACGACCGGCTGCATCGACTCGCTGAGACGGGCA
CAGCGCTACGCATCAACACGGCGTTTCTCACCGCCGCTGTGCTAGCCCAG
GTACACCCTGATGAGATGCCCACTCTGAAATCCCTCACGGTAGGCGGGGA
CGTTCTAACCGCAGAGCAAGTGGCCCTGTGGGCACCCCGACTCGACCACC
TCAACGTCAGCTACGGCACCACCGAAGGTATCATGTTCGACACGCTGCAC
GCGGACCTCAAACCCCTATCTGACCCTCGGAACATCGGTCGATCATTTGG
CCCACGTACCTGGATCGTCGATCCGGCGGACCACCACCGGCTGTTACCCA
TCGGTGCCGTCGGCGAACTAGTCGTACAAGGCGGGCGTCTATCTCAAGGC
TATCTCCAGAAACCAGAGAAAACCGCCACAGTCTTCATCGACGCTCCCGC
CTGGGCTCCAACAACCTCGCGATGCTATAAAACCGGTGACCTAGCCCGGT
ACCTCCCGGATGGCTCACTCTATCTGCTAGGCCGCAAGGACCGACAAGTC
AAACTCCGCGGCCAGCGGGTGGAACTGGACGATCTGGAAGCCCGGCTGAA
GCAGGCTGTGAACCTACCGGGAGGAATGGTCGTAGCTGATGTGATTGTAT
TGCCTGACTCAACGAAGCAACTTGTGGGCTTTGTCTACGATGACCTGCTC
ACCAAATCGTCTGGTGACGGTGATGCGCTCTTTGGGCTTCCCACAGCGGA
TTTCCAGGCTCTCATGCGCAAGATGGTCCAGCAGCTTAAGCAATCGCTTT
CTTGGCTCTTCATACCGACTTTTATGTTTCCACTCCTGTGCATGCCGAAA
ACGCGTACTGGCAAGATCGATCGCACACGGCTTCGACAAGCTGCAGCTGG
GCTGTCGCAGCGGGCTCGTCTGGCGTATGCGGTTCCGTTGAATGACGGGG
AAATTGATGAGGGCTGCGCACTTGTGGCGGGAGCGTCTAAGAGACAGATA
GATCTGGTTTGCAAATGGTATGCAAAGAGTTTGGGCGTTGGTCTTGATTT
TGTTCTACCGAAGAGCAACTTCTTTCACCTCGGAGGTGACTCAATTAAAG
CCATGCGGATCACGCGACTTGCGAAAGATGACGGCTATGAAGTTACTTTC
CGCGACATCTTTAATCATCCCCAGCCGGTAAGACTAGCTGCTAATGTATT
GATATCAAGTTCGGGAACTGGTGGTGAGATTATGACGGAAGCAACAGCTG
TCCCTTGA back to topCoding sequence (CDS) from alignment at An01:2769004..2771061- >CBS51388_000945-T1 ID=CBS51388_000945-T1|Name=CBS51388_000945-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2058bp|location=Sequence derived from alignment at An01:2769004..2771061- (Aspergillus niger CBS 513.88)
ATGGCCGGTCATATCGTCGATGCTATCCAGGAGATCCTGTCTTCTGTCTG
TCACAGCTGGAAGGGCAAGGTCAAGGACCTGTATCTCCTCTCCCGAGCCA
GTCGCGAGCAAATTCTATCCTGGAACACCCAGTCGCTGGAAGTGAGCCAG
CAATGCCTCCCGGACCTGATTGACCGCGCCAGTAGCCAGTATTCCGACGC
CATTGCCTGCTGCGGTATCAGCGAGCAGTTCACCTACCGCGAGCTTAAGC
ATTTCTCCACGGCCTTGTCGGCCTATCTCCTCGCCGCGGGCGTGCGTCCC
CGCACCTACGTCGGACTGATCCTCGACAAGACCATCTGGTCCGTGGTCAT
CATGCTGGCCGTGCTGCGGACGGGGGCGGCCTGCATGCCCCTGGATGGGG
CATTACCTCCAGTCCAGGTCTCAACCATGCTCTGTGAGGCCAGTACATCC
GTCATCCTCACCACCTCCTCGTCCTCCAAACTCGCACCACACTGGGAAGG
CTCAGTGCCCCAGATGCTGGAAATCTCGGGGAAACTGATCCAGCAGTTGC
CGGTGAAGGGACTACCAGCGTCATCCGCACATATTCCCCCATCGCAACCG
GCATTTCTCATGTACACGTCAGGCAGCACCGGAGCCCCCAAGGGCGTGAT
ACAGCCACACCAAGACGTAGTGACGTGCGTGCAACAGATGGCTCAAGCGT
TGAAGCTACACTCCGGCACTCGATTCCTCCAATTCGCCGCATTCAGCTTC
GACCTCAGCTGCGTGGAGACCTTGTGCACCTTATCCCGCGGCGGGTGTGT
CTGCATGCCGGGGAACGACGACCGGCTGCATCGACTCGCTGAGACGGGCA
CAGCGCTACGCATCAACACGGCGTTTCTCACCGCCGCTGTGCTAGCCCAG
GTACACCCTGATGAGATGCCCACTCTGAAATCCCTCACGGTAGGCGGGGA
CGTTCTAACCGCAGAGCAAGTGGCCCTGTGGGCACCCCGACTCGACCACC
TCAACGTCAGCTACGGCACCACCGAAGGTATCATGTTCGACACGCTGCAC
GCGGACCTCAAACCCCTATCTGACCCTCGGAACATCGGTCGATCATTTGG
CCCACGTACCTGGATCGTCGATCCGGCGGACCACCACCGGCTGTTACCCA
TCGGTGCCGTCGGCGAACTAGTCGTACAAGGCGGGCGTCTATCTCAAGGC
TATCTCCAGAAACCAGAGAAAACCGCCACAGTCTTCATCGACGCTCCCGC
CTGGGCTCCAACAACCTCGCGATGCTATAAAACCGGTGACCTAGCCCGGT
ACCTCCCGGATGGCTCACTCTATCTGCTAGGCCGCAAGGACCGACAAGTC
AAACTCCGCGGCCAGCGGGTGGAACTGGACGATCTGGAAGCCCGGCTGAA
GCAGGCTGTGAACCTACCGGGAGGAATGGTCGTAGCTGATGTGATTGTAT
TGCCTGACTCAACGAAGCAACTTGTGGGCTTTGTCTACGATGACCTGCTC
ACCAAATCGTCTGGTGACGGTGATGCGCTCTTTGGGCTTCCCACAGCGGA
TTTCCAGGCTCTCATGCGCAAGATGGTCCAGCAGCTTAAGCAATCGCTTT
CTTGGCTCTTCATACCGACTTTTATGTTTCCACTCCTGTGCATGCCGAAA
ACGCGTACTGGCAAGATCGATCGCACACGGCTTCGACAAGCTGCAGCTGG
GCTGTCGCAGCGGGCTCGTCTGGCGTATGCGGTTCCGTTGAATGACGGGG
AAATTGATGAGGGCTGCGCACTTGTGGCGGGAGCGTCTAAGAGACAGATA
GATCTGGTTTGCAAATGGTATGCAAAGAGTTTGGGCGTTGGTCTTGATTT
TGTTCTACCGAAGAGCAACTTCTTTCACCTCGGAGGTGACTCAATTAAAG
CCATGCGGATCACGCGACTTGCGAAAGATGACGGCTATGAAGTTACTTTC
CGCGACATCTTTAATCATCCCCAGCCGGTAAGACTAGCTGCTAATGTATT
GATATCAAGTTCGGGAACTGGTGGTGAGATTATGACGGAAGCAACAGCTG
TCCCTTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003824 | catalytic activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_1.4 |
| Note | antiSMASH:Cluster_1.5 |
| Note | SMCOG1002:AMP-dependent synthetase and ligase |
| DBxref | InterPro:IPR006162 |
| DBxref | InterPro:IPR020845 |
| DBxref | InterPro:IPR042099 |
| DBxref | InterPro:IPR036736 |
| DBxref | InterPro:IPR000873 |
| DBxref | InterPro:IPR010071 |
| DBxref | InterPro:IPR009081 |
| DBxref | PFAM:PF00550 |
| DBxref | PFAM:PF00501 |
| Product | putative NRPS-like protein biosynthetic cluster |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An01 | supercontig | An01:2769004..2771061 - |
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