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CBS51388_001151-T1, CBS51388_001151-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_001151-T1
Unique NameCBS51388_001151-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An01:3433002..3434703+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_001151-T1 ID=CBS51388_001151-T1|Name=CBS51388_001151-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1702bp|location=Sequence derived from alignment at An01:3433002..3434703+ (Aspergillus niger CBS 513.88)
ATGGCTGGTCCCGGTGGTGGCCCTCCTCGCAAGAGCCACACCAAGTCTCG
GTTCGGCTGCAAGACATGCAAGCGGCGGCACATCCGTTGTGACGAAACTT
TCCCACAATGGTAGGTTTGTTTTTTGCCTTCTGCAAACTGCAGCTGTGTA
GAATCGCTGCTGACCATCACAGCCGGAACTGCACCAAGCACAACTGTCGC
TGCGACTACATGGATGTTGCCACGGTTCACGACGACGCATCCTCCATGCG
CAACGTACCCGACCTGCTCATGTCCGCCGAAATCGAAATGGAGATCAAGA
ACTGGCAGTTCACAGGCGTCGCTCCGTTTGCTGAGCTGCTGCAGTTCCCG
CGTACCTGCTGGACTAAGCTCTCGCTGACTGATCTGCGCCTGATTCATCA
CATTGTTGGCCTTTCTATCGATCTCCAGCGCCGGGGTCTCGCTAGCTGCA
CTATTTGGGCGCAGAAGATGCCTACGTGAGTGGTTGTTTGTTAAGCCGCA
GCTTGGCAGAGTTACTGACGTTTGTATAGTTTTCTCGCTATTGCCATCGC
TAATATTTTGTCATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNGGTCTTGGGTTCNTGCATCCGATGTGGAAGCAGAG
TCCGAGTTGGCCTGTTCTTGGAAAATAGCGGTACCTGGGGTGCACCAACA
CCCCAGTTATGTCGGGCTACCAGTTCAAGACGAAGACCTGGCCAGCCTCG
ACCAAACCGTCGTGGCACTCCAGGCCCTGCAGAAGCGGGTTGCACACAAC
CATGCGCACTACCGCCGTATTGGGGAACTCCTAGAGTTTGTACGACACTT
CCAGCGAGATCTCCTCTCCCAAACCCCCGAGCAGGCCTTTGAGCGCATGC
AGCCGCTGCGGCGGTGGCTGTTCTGGCTTCCTCCTGCCATGCTGCGGCCT
GAAGATGCCGACATCGGCTCGCTAGCCATTCTGGCCCAGTTTTTCGGGGT
TGGCGTGGTCCTCGACAGCCTCTTCCCCAACTTGGGCGGTGCCTATTTGG
GTCCTCTCTCCATCAGTCCGATTGAAGAGATCTACCGGATGGTAGTTGCT
CGGAGCACAGCCGATCCTTTCCACCCCGATGCGCACCTCGCACTATCCGC
CATGGATCTTCCCCGGCATATTGTCGCCAAGTACAAAAGCCGGCTTCAGT
GGTCTCCGCGCACCTCCCTAGACCACTATTCTCCTGCACCTCCTAGTCCG
TATCACAGCGTCCACGATTACCGCCTCGCCTCGTCCTCTCCGTCTTCCGC
CTCCGCCACCTACGCTCCTTACACTCCGCCTCTGCAGTCCCCTCCCGAAG
TGACCATTGCCAGCCCCCCGTTTGACGTCAACGGAGCCTATGTGACGGCC
CCGGCGTCGCAGGCCTTGTATCCGAGCTCCCCACGGCTGCTCTCGGACCC
TCGTGACGATCTCTCGGATTACAGCCACGCGGGATCTCTGCAGCACTCCC
CTGCGTTTCCGCCCCCATATCTTGGCGACGTGATGTGCGGGGGACTGCCA
CGGGTGAACAATGGCGGGCTGGGGCTAAATATGCAGCTGTACGAAGAAAC
TCCGGTGATGGTTGGGGGGTATAACACGGCACCCGAGAGGGGATGGCACT
AG
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Coding sequence (CDS) from alignment at An01:3433002..3434703+

>CBS51388_001151-T1 ID=CBS51388_001151-T1|Name=CBS51388_001151-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4077bp|location=Sequence derived from alignment at An01:3433002..3434703+ (Aspergillus niger CBS 513.88)
ATGGCTGGTCCCGGTGGTGGCCCTCCTCGCAAGAGCCACACCAAGTCTCG
GTTCGGCTGCAAGACATGCAAGCGGCGGCACATCCGTTGTGACGAAACTT
TCCCACAATGCCGGAACTGCACCAAGCACAACTGTCGCTGCGACTACATG
GATGTTGCCACGGTTCACGACGACGCATCCTCCATGCGCAACGTACCCGA
CCTGCTCATGTCCGCCGAAATCGAAATGGAGATCAAGAACTGGCAGTTCA
CAGGCGTCGCTCCGTTTGCTGAGCTGCTGCAGTTCCCGCGTACCTGCTGG
ACTAAGCTCTCGCTGACTGATCTGCGCCTGATTCATCACATTGTTGGCCT
TTCTATCGATCTCCAGCGCCGGGGTCTCGCTAGCTGCACTATTTGGGCGC
AGAAGATGCCTACTTATGTCGGGCTACCAGTTCAAGACGAAGACCTGGCC
AGCCTCGACCAAACCGTCGTGGCACTCCAGGCCCTGCAGAAGCGGGTTGC
ACACAACCATGCGCACTACCGCCGTATTGGGGAACTCCTAGAGTTTGTAC
GACACTTCCAGCGAGATCTCCTCTCCCAAACCCCCGAGCAGGCCTTTGAG
CGCATGCAGCCGCTGCGGCGGTGGCTGTTCTGGCTTCCTCCTGCCATGCT
GCGGCCTGAAGATGCCGACATCGGCTCGCTAGCCATTCTGGCCCAGTTTT
TCGGGGTTGGCGTGGTCCTCGACAGCCTCTTCCCCAACTTGGGCGGTGCC
TATTTGGGTCCTCTCTCCATCAGTCCGATTGAAGAGATCTACCGGATGGT
AGTTGCTCGGAGCACAGCCGATCCTTTCCACCCCGATGCGCACCTCGCAC
TATCCGCCATGGATCTTCCCCGGCATATTGTCGCCAAGTACAAAAGCCGG
CTTCAGTGGTCTCCGCGCACCTCCCTAGACCACTATTCTCCTGCACCTCC
TAGTCCGTATCACAGCGTCCACGATTACCGCCTCGCCTCGTCCTCTCCGT
CTTCCGCCTCCGCCACCTACGCTCCTTACACTCCGCCTCTGCAGTCCCCT
CCCGAAGTGACCATTGCCAGCCCCCCGTTTGACGTCAACGGAGCCTATGT
GACGGCCCCGGCGTCGCAGGCCTTGTATCCGAGCTCCCCACGGCTGCTCT
CGGACCCTCGTGACGATCTCTCGGATTACAGCCACGCGGGATCTCTGCAG
CACTCCCCTGCGTTTCCGCCCCCATATCTTGGCGACGTGATGTGCGGGGG
ACTGCCACGGGTGAACAATGGCGGGCTGGGGCTAAATATGCAGCTGTACG
AAGAAACTCCGGTGATGGTTGGGGGGTATAACACGGCACCCGAGAGGGGA
TGGCACTAGATGGCTGGTCCCGGTGGTGGCCCTCCTCGCAAGAGCCACAC
CAAGTCTCGGTTCGGCTGCAAGACATGCAAGCGGCGGCACATCCGTTGTG
ACGAAACTTTCCCACAATGCCGGAACTGCACCAAGCACAACTGTCGCTGC
GACTACATGGATGTTGCCACGGTTCACGACGACGCATCCTCCATGCGCAA
CGTACCCGACCTGCTCATGTCCGCCGAAATCGAAATGGAGATCAAGAACT
GGCAGTTCACAGGCGTCGCTCCGTTTGCTGAGCTGCTGCAGTTCCCGCGT
ACCTGCTGGACTAAGCTCTCGCTGACTGATCTGCGCCTGATTCATCACAT
TGTTGGCCTTTCTATCGATCTCCAGCGCCGGGGTCTCGCTAGCTGCACTA
TTTGGGCGCAGAAGATGCCTACTTATGTCGGGCTACCAGTTCAAGACGAA
GACCTGGCCAGCCTCGACCAAACCGTCGTGGCACTCCAGGCCCTGCAGAA
GCGGGTTGCACACAACCATGCGCACTACCGCCGTATTGGGGAACTCCTAG
AGTTTGTACGACACTTCCAGCGAGATCTCCTCTCCCAAACCCCCGAGCAG
GCCTTTGAGCGCATGCAGCCGCTGCGGCGGTGGCTGTTCTGGCTTCCTCC
TGCCATGCTGCGGCCTGAAGATGCCGACATCGGCTCGCTAGCCATTCTGG
CCCAGTTTTTCGGGGTTGGCGTGGTCCTCGACAGCCTCTTCCCCAACTTG
GGCGGTGCCTATTTGGGTCCTCTCTCCATCAGTCCGATTGAAGAGATCTA
CCGGATGGTAGTTGCTCGGAGCACAGCCGATCCTTTCCACCCCGATGCGC
ACCTCGCACTATCCGCCATGGATCTTCCCCGGCATATTGTCGCCAAGTAC
AAAAGCCGGCTTCAGTGGTCTCCGCGCACCTCCCTAGACCACTATTCTCC
TGCACCTCCTAGTCCGTATCACAGCGTCCACGATTACCGCCTCGCCTCGT
CCTCTCCGTCTTCCGCCTCCGCCACCTACGCTCCTTACACTCCGCCTCTG
CAGTCCCCTCCCGAAGTGACCATTGCCAGCCCCCCGTTTGACGTCAACGG
AGCCTATGTGACGGCCCCGGCGTCGCAGGCCTTGTATCCGAGCTCCCCAC
GGCTGCTCTCGGACCCTCGTGACGATCTCTCGGATTACAGCCACGCGGGA
TCTCTGCAGCACTCCCCTGCGTTTCCGCCCCCATATCTTGGCGACGTGAT
GTGCGGGGGACTGCCACGGGTGAACAATGGCGGGCTGGGGCTAAATATGC
AGCTGTACGAAGAAACTCCGGTGATGGTTGGGGGGTATAACACGGCACCC
GAGAGGGGATGGCACTAGATGGCTGGTCCCGGTGGTGGCCCTCCTCGCAA
GAGCCACACCAAGTCTCGGTTCGGCTGCAAGACATGCAAGCGGCGGCACA
TCCGTTGTGACGAAACTTTCCCACAATGCCGGAACTGCACCAAGCACAAC
TGTCGCTGCGACTACATGGATGTTGCCACGGTTCACGACGACGCATCCTC
CATGCGCAACGTACCCGACCTGCTCATGTCCGCCGAAATCGAAATGGAGA
TCAAGAACTGGCAGTTCACAGGCGTCGCTCCGTTTGCTGAGCTGCTGCAG
TTCCCGCGTACCTGCTGGACTAAGCTCTCGCTGACTGATCTGCGCCTGAT
TCATCACATTGTTGGCCTTTCTATCGATCTCCAGCGCCGGGGTCTCGCTA
GCTGCACTATTTGGGCGCAGAAGATGCCTACTTATGTCGGGCTACCAGTT
CAAGACGAAGACCTGGCCAGCCTCGACCAAACCGTCGTGGCACTCCAGGC
CCTGCAGAAGCGGGTTGCACACAACCATGCGCACTACCGCCGTATTGGGG
AACTCCTAGAGTTTGTACGACACTTCCAGCGAGATCTCCTCTCCCAAACC
CCCGAGCAGGCCTTTGAGCGCATGCAGCCGCTGCGGCGGTGGCTGTTCTG
GCTTCCTCCTGCCATGCTGCGGCCTGAAGATGCCGACATCGGCTCGCTAG
CCATTCTGGCCCAGTTTTTCGGGGTTGGCGTGGTCCTCGACAGCCTCTTC
CCCAACTTGGGCGGTGCCTATTTGGGTCCTCTCTCCATCAGTCCGATTGA
AGAGATCTACCGGATGGTAGTTGCTCGGAGCACAGCCGATCCTTTCCACC
CCGATGCGCACCTCGCACTATCCGCCATGGATCTTCCCCGGCATATTGTC
GCCAAGTACAAAAGCCGGCTTCAGTGGTCTCCGCGCACCTCCCTAGACCA
CTATTCTCCTGCACCTCCTAGTCCGTATCACAGCGTCCACGATTACCGCC
TCGCCTCGTCCTCTCCGTCTTCCGCCTCCGCCACCTACGCTCCTTACACT
CCGCCTCTGCAGTCCCCTCCCGAAGTGACCATTGCCAGCCCCCCGTTTGA
CGTCAACGGAGCCTATGTGACGGCCCCGGCGTCGCAGGCCTTGTATCCGA
GCTCCCCACGGCTGCTCTCGGACCCTCGTGACGATCTCTCGGATTACAGC
CACGCGGGATCTCTGCAGCACTCCCCTGCGTTTCCGCCCCCATATCTTGG
CGACGTGATGTGCGGGGGACTGCCACGGGTGAACAATGGCGGGCTGGGGC
TAAATATGCAGCTGTACGAAGAAACTCCGGTGATGGTTGGGGGGTATAAC
ACGGCACCCGAGAGGGGATGGCACTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0042025host cell nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0008270zinc ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_001151CBS51388_001151Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_001151-T1.exon1CBS51388_001151-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_001151-T1.exon2CBS51388_001151-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_001151-T1.exon3CBS51388_001151-T1.exon3Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_001151-T1.cdsCBS51388_001151-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_001151-T1CBS51388_001151-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An01supercontigAn01:3433002..3434703 +
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