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CBS51388_001478-T1, CBS51388_001478-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_001478-T1
Unique NameCBS51388_001478-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An02:716762..717608+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_001478-T1 ID=CBS51388_001478-T1|Name=CBS51388_001478-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=847bp|location=Sequence derived from alignment at An02:716762..717608+ (Aspergillus niger CBS 513.88)
ATGAATCGTCAGTCAGTTTTACGGCTGGCTCGCCAGACCGGAGCTTTCCC
GCTGGCCGAATTGCCTCCTCCCTACCTCGCCCCGTCTCTCCATTTCTCTA
TGAACCGGTCGACCGTCCAGTGCTCGAACTTTTCTTCCACCGCCGCTGTT
GCCGCTGGCCGTGGTGATCTCAACAAAGTCCGCGGCGTGTCCGCTATTCA
CCGCACTGGCCCCAAGTACAAATTGGGTGTGTCCAAGTACCCATTGCCTA
AGCCGGTTTCCCCAGACGCTCTCCCGAAGCGAAATGCCACACCAGACCAT
GGACTCTGGGGTTTCTTCCCCACGGACCGGACCGCTTTGAGTACGCCGAC
ATACGACATTGAATGCGGTTAGTTTGGAACCATATAAGGCTGTGGTGACG
TTGTGATGCTTACTATTGATCGTTTAGGCCGCTCGTGGTCTATTCAGGAA
CTTCGTGAGAAGTCATGGGACGATCTCCATTCCCTGTGGTGGGTCTGCGT
CAAGGAGCGCAATCGCATAGCTACGAGCGATATGGAAAGGAAGAGATTGA
AGGCTGGTTATGGAGAGTGGGAATCCTCTGAGCGGGATCGTGTGGTAGGT
TCAGTCCTGTTGCTGGTTTATGTTTCAAGGCTCATGAAAGCTACAAACGT
CTTACTACGAAAATTATATACAACATTAATGGGCTGCTGCTCGCCTTGGT
GCTCAATGTGCTAATGAATGGCTTTCTTAGATCCGCGTCACGCAAAACGG
CATCAAGCACGTTCTTCGGGAAAGATGGTACGCCTGGGAGGAGGCACAGC
GTCTCTACAGAAAGGGCTACCGGCCTCAGGAGGATAGCCAGGAGTAA
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Coding sequence (CDS) from alignment at An02:716762..717608+

>CBS51388_001478-T1 ID=CBS51388_001478-T1|Name=CBS51388_001478-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1953bp|location=Sequence derived from alignment at An02:716762..717608+ (Aspergillus niger CBS 513.88)
ATGAATCGTCAGTCAGTTTTACGGCTGGCTCGCCAGACCGGAGCTTTCCC
GCTGGCCGAATTGCCTCCTCCCTACCTCGCCCCGTCTCTCCATTTCTCTA
TGAACCGGTCGACCGTCCAGTGCTCGAACTTTTCTTCCACCGCCGCTGTT
GCCGCTGGCCGTGGTGATCTCAACAAAGTCCGCGGCGTGTCCGCTATTCA
CCGCACTGGCCCCAAGTACAAATTGGGTGTGTCCAAGTACCCATTGCCTA
AGCCGGTTTCCCCAGACGCTCTCCCGAAGCGAAATGCCACACCAGACCAT
GGACTCTGGGGTTTCTTCCCCACGGACCGGACCGCTTTGAGTACGCCGAC
ATACGACATTGAATGCGGCCGCTCGTGGTCTATTCAGGAACTTCGTGAGA
AGTCATGGGACGATCTCCATTCCCTGTGGTGGGTCTGCGTCAAGGAGCGC
AATCGCATAGCTACGAGCGATATGGAAAGGAAGAGATTGAAGGCTGGTTA
TGGAGAGTGGGAATCCTCTGAGCGGGATCGTGTGATCCGCGTCACGCAAA
ACGGCATCAAGCACGTTCTTCGGGAAAGATGGTACGCCTGGGAGGAGGCA
CAGCGTCTCTACAGAAAGGGCTACCGGCCTCAGGAGGATAGCCAGGAGTA
AATGAATCGTCAGTCAGTTTTACGGCTGGCTCGCCAGACCGGAGCTTTCC
CGCTGGCCGAATTGCCTCCTCCCTACCTCGCCCCGTCTCTCCATTTCTCT
ATGAACCGGTCGACCGTCCAGTGCTCGAACTTTTCTTCCACCGCCGCTGT
TGCCGCTGGCCGTGGTGATCTCAACAAAGTCCGCGGCGTGTCCGCTATTC
ACCGCACTGGCCCCAAGTACAAATTGGGTGTGTCCAAGTACCCATTGCCT
AAGCCGGTTTCCCCAGACGCTCTCCCGAAGCGAAATGCCACACCAGACCA
TGGACTCTGGGGTTTCTTCCCCACGGACCGGACCGCTTTGAGTACGCCGA
CATACGACATTGAATGCGGCCGCTCGTGGTCTATTCAGGAACTTCGTGAG
AAGTCATGGGACGATCTCCATTCCCTGTGGTGGGTCTGCGTCAAGGAGCG
CAATCGCATAGCTACGAGCGATATGGAAAGGAAGAGATTGAAGGCTGGTT
ATGGAGAGTGGGAATCCTCTGAGCGGGATCGTGTGATCCGCGTCACGCAA
AACGGCATCAAGCACGTTCTTCGGGAAAGATGGTACGCCTGGGAGGAGGC
ACAGCGTCTCTACAGAAAGGGCTACCGGCCTCAGGAGGATAGCCAGGAGT
AAATGAATCGTCAGTCAGTTTTACGGCTGGCTCGCCAGACCGGAGCTTTC
CCGCTGGCCGAATTGCCTCCTCCCTACCTCGCCCCGTCTCTCCATTTCTC
TATGAACCGGTCGACCGTCCAGTGCTCGAACTTTTCTTCCACCGCCGCTG
TTGCCGCTGGCCGTGGTGATCTCAACAAAGTCCGCGGCGTGTCCGCTATT
CACCGCACTGGCCCCAAGTACAAATTGGGTGTGTCCAAGTACCCATTGCC
TAAGCCGGTTTCCCCAGACGCTCTCCCGAAGCGAAATGCCACACCAGACC
ATGGACTCTGGGGTTTCTTCCCCACGGACCGGACCGCTTTGAGTACGCCG
ACATACGACATTGAATGCGGCCGCTCGTGGTCTATTCAGGAACTTCGTGA
GAAGTCATGGGACGATCTCCATTCCCTGTGGTGGGTCTGCGTCAAGGAGC
GCAATCGCATAGCTACGAGCGATATGGAAAGGAAGAGATTGAAGGCTGGT
TATGGAGAGTGGGAATCCTCTGAGCGGGATCGTGTGATCCGCGTCACGCA
AAACGGCATCAAGCACGTTCTTCGGGAAAGATGGTACGCCTGGGAGGAGG
CACAGCGTCTCTACAGAAAGGGCTACCGGCCTCAGGAGGATAGCCAGGAG
TAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005761mitochondrial ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
MRPL4CBS51388_001478Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_001478-T1.exon1CBS51388_001478-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_001478-T1.exon2CBS51388_001478-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_001478-T1.exon3CBS51388_001478-T1.exon3Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_001478-T1.cdsCBS51388_001478-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_001478-T1CBS51388_001478-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09264BWL
DBxrefInterPro:IPR010729
DBxrefInterPro:IPR038340
DBxrefPFAM:PF06984
Product54S ribosomal protein L4 mitochondrial
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An02supercontigAn02:716762..717608 +
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