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CBS51388_001780-T1, CBS51388_001780-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_001780-T1
Unique NameCBS51388_001780-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An02:1690294..1692333-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_001780-T1 ID=CBS51388_001780-T1|Name=CBS51388_001780-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2040bp|location=Sequence derived from alignment at An02:1690294..1692333- (Aspergillus niger CBS 513.88)
ATGTCTGCGGCTGTTACTTCGACCGTTTCGACCAGTCTAACTAATCATAC
CGATACTCGTAATTCTACCCCAATGGATGCGAAAAAGGCGGGTCTAGACG
AAGGTGAGTGTTGTGCATCTTTAAAAAAAAAACTGTTTCGATCCTTCGTT
TTGCGCGCGTGGAACTCTGGTACCTCCCATGCCCCAAACTCCCGAATATC
TGCTGTATCTTGCACTTCCTTACTTCATCATCGACCCTTGACCTGTTCTG
GCTTGGTTGTAGGCCACTGTTCCCCCAAATGTTCTGTTGACTACCCGCCG
CCGTCGGGATGACCTCACAATTGGCGTCATCGATGGGGGGTCACTGTTAT
CAGATCCCCTTCCTCGCAAACTTCGGCCTGGACCGCCTCATTTGGCCAAC
CTCTTTCATTCTACCCCTGTTTCAGATAACCTCACTGTCGCGTACTTCAT
CATCGTCATTGCTATTGTCGTTGTCGGTGTTGTCATACTAACGCGCACAT
TTGCTCCGGATACAGACTCCCGGGCGACCTCTTCGGATCTTAAAGATACC
AAGCCTGATGTAGATCCTCAAACCTCGTTGGCGCCGCCTCCGCGACCAGC
CATAACAAGCGCGACTGATACCCCCGATTACTTCAACTCCGTCCACAACC
CTTTCTCTCTGGAACCCAATCCCTTCGAGCAATCTTTCGGCAGTGGTGGT
TCCTCGGGCGAAACACCCGGAAAGTCGATCCTTCCTCCTGTTGCAGCACT
TACTTCTCCTGCCCTGCCGGGCACAAGCTCTGCCGGTGGCGGCTACGGCT
GGTCCAACTCTCTGCGCTCCGGGCCGCTGAGTCCTGCTATGCTCGCCGGC
CCGACTGGCACGAGCGATTATTTTGACAGTATTGGCAGGGGCTTCCCTAC
CCCTAACGAGTCTTCTCTCCGCACTGGATTGACCCCGGGCGGAGGGGGTT
CTATGTTTCCTGCTCCTAGCCCCAACTCTCAGGCACTTCTGCAGCAGCTG
CAGAGTGGTGGTGCGACACCGTCGACCATTGAGTTCCACCGTACTGCCCT
TAACGCTGCCAAGAAGAACAGCTTAGGTGGCCCAACCTCTAACCCCACTT
CCGAACCTGATCCAGCGACGCAAAACTCCAATATGGATATTAAGCCGAAC
CCGCCTGCCGGTTCCGACCCATTTGGTCATCATGACGCTGCTGATGCGGC
TAACGGGCTTTTCATGCTGGCCAAGGGCGGACAGGCGAACCCCAATCAGT
TCACTGTATCGAACCAAGCATCGATTCAGCCACAAAGTATTCAGGCCAAT
GACCAGCAACTTGATGCTGGCGCCGATAGACGTAACTCGCAAAACATGAA
TGGTGTATCAGGCAGAGAGACCAGCGGTGACGCCTCTGACATGCAGGGTG
AGCAGACGAAGCCCGCTGCCAAGGGCAAAGCCAAGAAGAACACTGGCACA
AAAGCCAGCACCGCGGCAAACAACAGGCGCAAAGCAGAAGATGCACCGAA
GGGTTCAAACAAGAAGGCCAAAACGAGTAACGGGTCTGGTAGTGTTGAGC
CTCCTTCCGATGTTGGGGATTCCGAAGACGATGAAGATGATATGAAGAGA
AAGAACTCGACAGACACGAAGAAAATGACTGATGAAGAGAAGAGAAAGAA
CTTTCTCGAGAGGAACAGGTAAGAAGCGCTTTTTACCATTTGGCGCGCTC
AAGTTATTGGCTTGGTGCTAACGTTCTTTGTAGGGTTGCGGCGCTCAAGT
GTCGCCAGCGAAAGAAGCAGTGGCTTGCCAACCTTCAAGCGAAGGTGGAA
TTGTTCACCTCCGAGAATGATGCGCTTACTGCCACTGTCACGCAGCTCCG
TGAGGAAATCGTCAATCTCAAGACTTTGTTGCTTGCGCATAAGGACTGCC
CAGTCTCCCAGGCCCAAGGTTTAGGCCCTCTCATGATGAATGGCATGTCG
GCAGGATTTGATGCGCATCCATACAACATCCCTAACGGTATGGCAATGCA
ACCTGGAGCACCTATCCCTGCTCAGGGGCTACGACGGTAA
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Coding sequence (CDS) from alignment at An02:1690294..1692333-

>CBS51388_001780-T1 ID=CBS51388_001780-T1|Name=CBS51388_001780-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4959bp|location=Sequence derived from alignment at An02:1690294..1692333- (Aspergillus niger CBS 513.88)
GGTTGCGGCGCTCAAGTGTCGCCAGCGAAAGAAGCAGTGGCTTGCCAACC
TTCAAGCGAAGGTGGAATTGTTCACCTCCGAGAATGATGCGCTTACTGCC
ACTGTCACGCAGCTCCGTGAGGAAATCGTCAATCTCAAGACTTTGTTGCT
TGCGCATAAGGACTGCCCAGTCTCCCAGGCCCAAGGTTTAGGCCCTCTCA
TGATGAATGGCATGTCGGCAGGATTTGATGCGCATCCATACAACATCCCT
AACGGTATGGCAATGCAACCTGGAGCACCTATCCCTGCTCAGGGGCTACG
ACGGTAAATAACCTCACTGTCGCGTACTTCATCATCGTCATTGCTATTGT
CGTTGTCGGTGTTGTCATACTAACGCGCACATTTGCTCCGGATACAGACT
CCCGGGCGACCTCTTCGGATCTTAAAGATACCAAGCCTGATGTAGATCCT
CAAACCTCGTTGGCGCCGCCTCCGCGACCAGCCATAACAAGCGCGACTGA
TACCCCCGATTACTTCAACTCCGTCCACAACCCTTTCTCTCTGGAACCCA
ATCCCTTCGAGCAATCTTTCGGCAGTGGTGGTTCCTCGGGCGAAACACCC
GGAAAGTCGATCCTTCCTCCTGTTGCAGCACTTACTTCTCCTGCCCTGCC
GGGCACAAGCTCTGCCGGTGGCGGCTACGGCTGGTCCAACTCTCTGCGCT
CCGGGCCGCTGAGTCCTGCTATGCTCGCCGGCCCGACTGGCACGAGCGAT
TATTTTGACAGTATTGGCAGGGGCTTCCCTACCCCTAACGAGTCTTCTCT
CCGCACTGGATTGACCCCGGGCGGAGGGGGTTCTATGTTTCCTGCTCCTA
GCCCCAACTCTCAGGCACTTCTGCAGCAGCTGCAGAGTGGTGGTGCGACA
CCGTCGACCATTGAGTTCCACCGTACTGCCCTTAACGCTGCCAAGAAGAA
CAGCTTAGGTGGCCCAACCTCTAACCCCACTTCCGAACCTGATCCAGCGA
CGCAAAACTCCAATATGGATATTAAGCCGAACCCGCCTGCCGGTTCCGAC
CCATTTGGTCATCATGACGCTGCTGATGCGGCTAACGGGCTTTTCATGCT
GGCCAAGGGCGGACAGGCGAACCCCAATCAGTTCACTGTATCGAACCAAG
CATCGATTCAGCCACAAAGTATTCAGGCCAATGACCAGCAACTTGATGCT
GGCGCCGATAGACGTAACTCGCAAAACATGAATGGTGTATCAGGCAGAGA
GACCAGCGGTGACGCCTCTGACATGCAGGGTGAGCAGACGAAGCCCGCTG
CCAAGGGCAAAGCCAAGAAGAACACTGGCACAAAAGCCAGCACCGCGGCA
AACAACAGGCGCAAAGCAGAAGATGCACCGAAGGGTTCAAACAAGAAGGC
CAAAACGAGTAACGGGTCTGGTAGTGTTGAGCCTCCTTCCGATGTTGGGG
ATTCCGAAGACGATGAAGATGATATGAAGAGAAAGAACTCGACAGACACG
AAGAAAATGACTGATGAAGAGAAGAGAAAGAACTTTCTCGAGAGGAACAG
ATGTCTGCGGCTGTTACTTCGACCGTTTCGACCAGTCTAACTAATCATAC
CGATACTCGTAATTCTACCCCAATGGATGCGAAAAAGGCGGGTCTAGACG
AAGGGTTGCGGCGCTCAAGTGTCGCCAGCGAAAGAAGCAGTGGCTTGCCA
ACCTTCAAGCGAAGGTGGAATTGTTCACCTCCGAGAATGATGCGCTTACT
GCCACTGTCACGCAGCTCCGTGAGGAAATCGTCAATCTCAAGACTTTGTT
GCTTGCGCATAAGGACTGCCCAGTCTCCCAGGCCCAAGGTTTAGGCCCTC
TCATGATGAATGGCATGTCGGCAGGATTTGATGCGCATCCATACAACATC
CCTAACGGTATGGCAATGCAACCTGGAGCACCTATCCCTGCTCAGGGGCT
ACGACGGTAAATAACCTCACTGTCGCGTACTTCATCATCGTCATTGCTAT
TGTCGTTGTCGGTGTTGTCATACTAACGCGCACATTTGCTCCGGATACAG
ACTCCCGGGCGACCTCTTCGGATCTTAAAGATACCAAGCCTGATGTAGAT
CCTCAAACCTCGTTGGCGCCGCCTCCGCGACCAGCCATAACAAGCGCGAC
TGATACCCCCGATTACTTCAACTCCGTCCACAACCCTTTCTCTCTGGAAC
CCAATCCCTTCGAGCAATCTTTCGGCAGTGGTGGTTCCTCGGGCGAAACA
CCCGGAAAGTCGATCCTTCCTCCTGTTGCAGCACTTACTTCTCCTGCCCT
GCCGGGCACAAGCTCTGCCGGTGGCGGCTACGGCTGGTCCAACTCTCTGC
GCTCCGGGCCGCTGAGTCCTGCTATGCTCGCCGGCCCGACTGGCACGAGC
GATTATTTTGACAGTATTGGCAGGGGCTTCCCTACCCCTAACGAGTCTTC
TCTCCGCACTGGATTGACCCCGGGCGGAGGGGGTTCTATGTTTCCTGCTC
CTAGCCCCAACTCTCAGGCACTTCTGCAGCAGCTGCAGAGTGGTGGTGCG
ACACCGTCGACCATTGAGTTCCACCGTACTGCCCTTAACGCTGCCAAGAA
GAACAGCTTAGGTGGCCCAACCTCTAACCCCACTTCCGAACCTGATCCAG
CGACGCAAAACTCCAATATGGATATTAAGCCGAACCCGCCTGCCGGTTCC
GACCCATTTGGTCATCATGACGCTGCTGATGCGGCTAACGGGCTTTTCAT
GCTGGCCAAGGGCGGACAGGCGAACCCCAATCAGTTCACTGTATCGAACC
AAGCATCGATTCAGCCACAAAGTATTCAGGCCAATGACCAGCAACTTGAT
GCTGGCGCCGATAGACGTAACTCGCAAAACATGAATGGTGTATCAGGCAG
AGAGACCAGCGGTGACGCCTCTGACATGCAGGGTGAGCAGACGAAGCCCG
CTGCCAAGGGCAAAGCCAAGAAGAACACTGGCACAAAAGCCAGCACCGCG
GCAAACAACAGGCGCAAAGCAGAAGATGCACCGAAGGGTTCAAACAAGAA
GGCCAAAACGAGTAACGGGTCTGGTAGTGTTGAGCCTCCTTCCGATGTTG
GGGATTCCGAAGACGATGAAGATGATATGAAGAGAAAGAACTCGACAGAC
ACGAAGAAAATGACTGATGAAGAGAAGAGAAAGAACTTTCTCGAGAGGAA
CAGATGTCTGCGGCTGTTACTTCGACCGTTTCGACCAGTCTAACTAATCA
TACCGATACTCGTAATTCTACCCCAATGGATGCGAAAAAGGCGGGTCTAG
ACGAAGGGTTGCGGCGCTCAAGTGTCGCCAGCGAAAGAAGCAGTGGCTTG
CCAACCTTCAAGCGAAGGTGGAATTGTTCACCTCCGAGAATGATGCGCTT
ACTGCCACTGTCACGCAGCTCCGTGAGGAAATCGTCAATCTCAAGACTTT
GTTGCTTGCGCATAAGGACTGCCCAGTCTCCCAGGCCCAAGGTTTAGGCC
CTCTCATGATGAATGGCATGTCGGCAGGATTTGATGCGCATCCATACAAC
ATCCCTAACGGTATGGCAATGCAACCTGGAGCACCTATCCCTGCTCAGGG
GCTACGACGGTAAATAACCTCACTGTCGCGTACTTCATCATCGTCATTGC
TATTGTCGTTGTCGGTGTTGTCATACTAACGCGCACATTTGCTCCGGATA
CAGACTCCCGGGCGACCTCTTCGGATCTTAAAGATACCAAGCCTGATGTA
GATCCTCAAACCTCGTTGGCGCCGCCTCCGCGACCAGCCATAACAAGCGC
GACTGATACCCCCGATTACTTCAACTCCGTCCACAACCCTTTCTCTCTGG
AACCCAATCCCTTCGAGCAATCTTTCGGCAGTGGTGGTTCCTCGGGCGAA
ACACCCGGAAAGTCGATCCTTCCTCCTGTTGCAGCACTTACTTCTCCTGC
CCTGCCGGGCACAAGCTCTGCCGGTGGCGGCTACGGCTGGTCCAACTCTC
TGCGCTCCGGGCCGCTGAGTCCTGCTATGCTCGCCGGCCCGACTGGCACG
AGCGATTATTTTGACAGTATTGGCAGGGGCTTCCCTACCCCTAACGAGTC
TTCTCTCCGCACTGGATTGACCCCGGGCGGAGGGGGTTCTATGTTTCCTG
CTCCTAGCCCCAACTCTCAGGCACTTCTGCAGCAGCTGCAGAGTGGTGGT
GCGACACCGTCGACCATTGAGTTCCACCGTACTGCCCTTAACGCTGCCAA
GAAGAACAGCTTAGGTGGCCCAACCTCTAACCCCACTTCCGAACCTGATC
CAGCGACGCAAAACTCCAATATGGATATTAAGCCGAACCCGCCTGCCGGT
TCCGACCCATTTGGTCATCATGACGCTGCTGATGCGGCTAACGGGCTTTT
CATGCTGGCCAAGGGCGGACAGGCGAACCCCAATCAGTTCACTGTATCGA
ACCAAGCATCGATTCAGCCACAAAGTATTCAGGCCAATGACCAGCAACTT
GATGCTGGCGCCGATAGACGTAACTCGCAAAACATGAATGGTGTATCAGG
CAGAGAGACCAGCGGTGACGCCTCTGACATGCAGGGTGAGCAGACGAAGC
CCGCTGCCAAGGGCAAAGCCAAGAAGAACACTGGCACAAAAGCCAGCACC
GCGGCAAACAACAGGCGCAAAGCAGAAGATGCACCGAAGGGTTCAAACAA
GAAGGCCAAAACGAGTAACGGGTCTGGTAGTGTTGAGCCTCCTTCCGATG
TTGGGGATTCCGAAGACGATGAAGATGATATGAAGAGAAAGAACTCGACA
GACACGAAGAAAATGACTGATGAAGAGAAGAGAAAGAACTTTCTCGAGAG
GAACAGATGTCTGCGGCTGTTACTTCGACCGTTTCGACCAGTCTAACTAA
TCATACCGATACTCGTAATTCTACCCCAATGGATGCGAAAAAGGCGGGTC
TAGACGAAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0003700DNA-binding transcription factor activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_001780CBS51388_001780Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_001780-T1CBS51388_001780-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_001780-T1.cdsCBS51388_001780-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_001780-T1.exon3CBS51388_001780-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_001780-T1.exon2CBS51388_001780-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_001780-T1.exon1CBS51388_001780-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR021756
DBxrefInterPro:IPR020956
DBxrefInterPro:IPR021755
DBxrefInterPro:IPR004827
DBxrefInterPro:IPR002112
DBxrefPFAM:PF07716
DBxrefPFAM:PF00170
DBxrefPFAM:PF11785
DBxrefPFAM:PF11787
DBxrefPFAM:PF11786
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An02supercontigAn02:1690294..1692333 -
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