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Sequences
The following sequences are available for this feature:
mRNA from alignment at An02:1845115..1847146- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_001832-T1 ID=CBS51388_001832-T1|Name=CBS51388_001832-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2032bp|location=Sequence derived from alignment at An02:1845115..1847146- (Aspergillus niger CBS 513.88)
ATGGCTCCACGAGATTCTAGCACTATTACGTCCCGTCGACGCCCCTCTTT
CTCCCTCCGCACTCGGCCTCGAACTGCTACGACCTCAACCGCTCATACAA
CCGGATTGGAACATGACGTGTGGCACGGGCTGTCTGTGGTGGATTCGGGA
GATGATGATGACGGCCAGGTCGTGGAGGATATGAACCATTTTCCAGAGCC
TGTCCCTAGGTGCCGTGAAGCCAAGAGCTTCTCTAGCTTACGCCATCCCG
TGGACGGTCTGCGAGCTCTGGGTCGTCGCCTCTCGGTGACGCTCCGCAAC
AAGTCGTCCAGGCATTCTGTTCATCCTCAACCAGAAACCATGAGAAATTC
CTGGTGCAATGAAACTAGCATTAATCGTCGACCATCCCTGGAAAGCATCT
CCGCGCTGCACGGTTTCTACGCCCATGCTGGCGCCCCTGTTCCTGGAAAT
GGCCTGGAGCCACCTGTTTTCTCGAATGACATTTATGCGGGAGCGGCAGC
TCGCGCTGCAGCTGCAGCTCAGAATGAGCTGGCAAGAGCTCTGCGGGACA
GTATCAAGCTCTCGGATGCGAGATTGACTCAAGACTCGGAAAGTGGCATT
GGAATCGATCTACGCGATCGCTCAGAGCTATCTGACCCAGCCCTGGCTAT
AGTACGGATTGATCCTGTTGGCTGCCTTCCTCCTGAGGTCATGTCACAAG
TGTTCTCCTACCTCGATCCCGAGTCCCTTATGCAGTCTGAGCTGGTTTCT
CGTGCTTGGAGTGAGCAGGCATCCTCCCGGCACATCTGGCGGCACGTGTT
CCGCCATACTTACGGACAACACCCTAGCGGGCTCCCTTTCAAGAAGAGAC
AATCTGCTGGTTTGGGTAAGACTCATCCCAAGCAGGATTGGAAGCGGATG
TTCCTGGTTCGCCGTGCTTTGGAACATCGGTGGAAGGAAGGAAAGGCTGC
TGCTATCTACCTTCATGGCCACAAGGACAGTGTCTACTGTGCGCAATTTG
ATGAGTAAGTTACTCGTTGGTAAACATATGCATATAAGCTTTTTCTAATC
ATTCCCCAGGGACAAAATCATCACTGGCTCTCGCGATCGAACCATTCGTG
TATGGGACGCTCATTACCCTTGGCCATGCCGAAAGATCATTGGCCCTCCC
CCGGGCGATGTATCCGGTATTGGTCCGGTCAATAACCCGGCGCAACAATC
AGCCGGAAAGCCGCCCTTCTTGACCATCTGCCCCCCGCCGACGCGCTCTG
CGGGGATCATGGCTCCCATTGAGCACAGCGCAGACTATCACAGTGCTTCC
ATTCTCTGCCTCCAGTTTGACGAAGAAATCATGGTCACCGGTTCGTCTGA
TTTTACCTGCATTGTGTGGGATATCAAGAACGACTACAAGCCGATTCGTC
GCCTTGTGGGCCATCAGGCAGGAGTGCTGGATGTCTGCTTTGATGACCGT
TACATTGTGTCCTGCTCCAAAGACACTACAATCTGTGTGTGGGATCGGCA
CACAGGGGCCTTGGTGAAGAAACTCCTTGGCCACAGAGGTCCAGTGAACG
CTGTTCAGCTGCGGGGAGATCTTGTCGTTTCTGCAAGCGGGGACGGTGTC
GCCAAGCTCTGGAACATCACTTCTGGCCTTTGTGTGAAGGAGTTTCCCAG
CAAGGACCGTGGGCTGGCATGTGTCGAATTCAGCGATGATGCTCGAACCA
TTCTCACTGGCGGCAACGATCAAGTGATCTATCAGTTTGACGCCAATACT
GGCGACATGGTCAATGAGCTCAAGGGCCACGCGGGCTTGGTTCGCTCCTT
GCACCTCGACAGTATGAATCAAAGAATCGTCAGTGGTAGTTATGACATGA
GTGTCAAAGTATTCGATGCTCAAAGTGGCGAGCTATCCATTGACCTTCCG
GGCTGGACAACGAGCTGGATGCTCAGCGTCAAGTCCGATTATCGGCGCAT
TGTGGCTACCAGCCAAGACTCTCGCGCTGTCATAATGGATTTTGGATACG
GACTAGATGGCATAGACTTGCTGAAAGAGTAA back to topCoding sequence (CDS) from alignment at An02:1845115..1847146- >CBS51388_001832-T1 ID=CBS51388_001832-T1|Name=CBS51388_001832-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3954bp|location=Sequence derived from alignment at An02:1845115..1847146- (Aspergillus niger CBS 513.88)
GGACAAAATCATCACTGGCTCTCGCGATCGAACCATTCGTGTATGGGACG
CTCATTACCCTTGGCCATGCCGAAAGATCATTGGCCCTCCCCCGGGCGAT
GTATCCGGTATTGGTCCGGTCAATAACCCGGCGCAACAATCAGCCGGAAA
GCCGCCCTTCTTGACCATCTGCCCCCCGCCGACGCGCTCTGCGGGGATCA
TGGCTCCCATTGAGCACAGCGCAGACTATCACAGTGCTTCCATTCTCTGC
CTCCAGTTTGACGAAGAAATCATGGTCACCGGTTCGTCTGATTTTACCTG
CATTGTGTGGGATATCAAGAACGACTACAAGCCGATTCGTCGCCTTGTGG
GCCATCAGGCAGGAGTGCTGGATGTCTGCTTTGATGACCGTTACATTGTG
TCCTGCTCCAAAGACACTACAATCTGTGTGTGGGATCGGCACACAGGGGC
CTTGGTGAAGAAACTCCTTGGCCACAGAGGTCCAGTGAACGCTGTTCAGC
TGCGGGGAGATCTTGTCGTTTCTGCAAGCGGGGACGGTGTCGCCAAGCTC
TGGAACATCACTTCTGGCCTTTGTGTGAAGGAGTTTCCCAGCAAGGACCG
TGGGCTGGCATGTGTCGAATTCAGCGATGATGCTCGAACCATTCTCACTG
GCGGCAACGATCAAGTGATCTATCAGTTTGACGCCAATACTGGCGACATG
GTCAATGAGCTCAAGGGCCACGCGGGCTTGGTTCGCTCCTTGCACCTCGA
CAGTATGAATCAAAGAATCGTCAGTGGTAGTTATGACATGAGTGTCAAAG
TATTCGATGCTCAAAGTGGCGAGCTATCCATTGACCTTCCGGGCTGGACA
ACGAGCTGGATGCTCAGCGTCAAGTCCGATTATCGGCGCATTGTGGCTAC
CAGCCAAGACTCTCGCGCTGTCATAATGGATTTTGGATACGGACTAGATG
GCATAGACTTGCTGAAAGAGTAAATGGCTCCACGAGATTCTAGCACTATT
ACGTCCCGTCGACGCCCCTCTTTCTCCCTCCGCACTCGGCCTCGAACTGC
TACGACCTCAACCGCTCATACAACCGGATTGGAACATGACGTGTGGCACG
GGCTGTCTGTGGTGGATTCGGGAGATGATGATGACGGCCAGGTCGTGGAG
GATATGAACCATTTTCCAGAGCCTGTCCCTAGGTGCCGTGAAGCCAAGAG
CTTCTCTAGCTTACGCCATCCCGTGGACGGTCTGCGAGCTCTGGGTCGTC
GCCTCTCGGTGACGCTCCGCAACAAGTCGTCCAGGCATTCTGTTCATCCT
CAACCAGAAACCATGAGAAATTCCTGGTGCAATGAAACTAGCATTAATCG
TCGACCATCCCTGGAAAGCATCTCCGCGCTGCACGGTTTCTACGCCCATG
CTGGCGCCCCTGTTCCTGGAAATGGCCTGGAGCCACCTGTTTTCTCGAAT
GACATTTATGCGGGAGCGGCAGCTCGCGCTGCAGCTGCAGCTCAGAATGA
GCTGGCAAGAGCTCTGCGGGACAGTATCAAGCTCTCGGATGCGAGATTGA
CTCAAGACTCGGAAAGTGGCATTGGAATCGATCTACGCGATCGCTCAGAG
CTATCTGACCCAGCCCTGGCTATAGTACGGATTGATCCTGTTGGCTGCCT
TCCTCCTGAGGTCATGTCACAAGTGTTCTCCTACCTCGATCCCGAGTCCC
TTATGCAGTCTGAGCTGGTTTCTCGTGCTTGGAGTGAGCAGGCATCCTCC
CGGCACATCTGGCGGCACGTGTTCCGCCATACTTACGGACAACACCCTAG
CGGGCTCCCTTTCAAGAAGAGACAATCTGCTGGTTTGGGTAAGACTCATC
CCAAGCAGGATTGGAAGCGGATGTTCCTGGTTCGCCGTGCTTTGGAACAT
CGGTGGAAGGAAGGAAAGGCTGCTGCTATCTACCTTCATGGCCACAAGGA
CAGTGTCTACTGTGCGCAATTTGATGAGGACAAAATCATCACTGGCTCTC
GCGATCGAACCATTCGTGTATGGGACGCTCATTACCCTTGGCCATGCCGA
AAGATCATTGGCCCTCCCCCGGGCGATGTATCCGGTATTGGTCCGGTCAA
TAACCCGGCGCAACAATCAGCCGGAAAGCCGCCCTTCTTGACCATCTGCC
CCCCGCCGACGCGCTCTGCGGGGATCATGGCTCCCATTGAGCACAGCGCA
GACTATCACAGTGCTTCCATTCTCTGCCTCCAGTTTGACGAAGAAATCAT
GGTCACCGGTTCGTCTGATTTTACCTGCATTGTGTGGGATATCAAGAACG
ACTACAAGCCGATTCGTCGCCTTGTGGGCCATCAGGCAGGAGTGCTGGAT
GTCTGCTTTGATGACCGTTACATTGTGTCCTGCTCCAAAGACACTACAAT
CTGTGTGTGGGATCGGCACACAGGGGCCTTGGTGAAGAAACTCCTTGGCC
ACAGAGGTCCAGTGAACGCTGTTCAGCTGCGGGGAGATCTTGTCGTTTCT
GCAAGCGGGGACGGTGTCGCCAAGCTCTGGAACATCACTTCTGGCCTTTG
TGTGAAGGAGTTTCCCAGCAAGGACCGTGGGCTGGCATGTGTCGAATTCA
GCGATGATGCTCGAACCATTCTCACTGGCGGCAACGATCAAGTGATCTAT
CAGTTTGACGCCAATACTGGCGACATGGTCAATGAGCTCAAGGGCCACGC
GGGCTTGGTTCGCTCCTTGCACCTCGACAGTATGAATCAAAGAATCGTCA
GTGGTAGTTATGACATGAGTGTCAAAGTATTCGATGCTCAAAGTGGCGAG
CTATCCATTGACCTTCCGGGCTGGACAACGAGCTGGATGCTCAGCGTCAA
GTCCGATTATCGGCGCATTGTGGCTACCAGCCAAGACTCTCGCGCTGTCA
TAATGGATTTTGGATACGGACTAGATGGCATAGACTTGCTGAAAGAGTAA
ATGGCTCCACGAGATTCTAGCACTATTACGTCCCGTCGACGCCCCTCTTT
CTCCCTCCGCACTCGGCCTCGAACTGCTACGACCTCAACCGCTCATACAA
CCGGATTGGAACATGACGTGTGGCACGGGCTGTCTGTGGTGGATTCGGGA
GATGATGATGACGGCCAGGTCGTGGAGGATATGAACCATTTTCCAGAGCC
TGTCCCTAGGTGCCGTGAAGCCAAGAGCTTCTCTAGCTTACGCCATCCCG
TGGACGGTCTGCGAGCTCTGGGTCGTCGCCTCTCGGTGACGCTCCGCAAC
AAGTCGTCCAGGCATTCTGTTCATCCTCAACCAGAAACCATGAGAAATTC
CTGGTGCAATGAAACTAGCATTAATCGTCGACCATCCCTGGAAAGCATCT
CCGCGCTGCACGGTTTCTACGCCCATGCTGGCGCCCCTGTTCCTGGAAAT
GGCCTGGAGCCACCTGTTTTCTCGAATGACATTTATGCGGGAGCGGCAGC
TCGCGCTGCAGCTGCAGCTCAGAATGAGCTGGCAAGAGCTCTGCGGGACA
GTATCAAGCTCTCGGATGCGAGATTGACTCAAGACTCGGAAAGTGGCATT
GGAATCGATCTACGCGATCGCTCAGAGCTATCTGACCCAGCCCTGGCTAT
AGTACGGATTGATCCTGTTGGCTGCCTTCCTCCTGAGGTCATGTCACAAG
TGTTCTCCTACCTCGATCCCGAGTCCCTTATGCAGTCTGAGCTGGTTTCT
CGTGCTTGGAGTGAGCAGGCATCCTCCCGGCACATCTGGCGGCACGTGTT
CCGCCATACTTACGGACAACACCCTAGCGGGCTCCCTTTCAAGAAGAGAC
AATCTGCTGGTTTGGGTAAGACTCATCCCAAGCAGGATTGGAAGCGGATG
TTCCTGGTTCGCCGTGCTTTGGAACATCGGTGGAAGGAAGGAAAGGCTGC
TGCTATCTACCTTCATGGCCACAAGGACAGTGTCTACTGTGCGCAATTTG
ATGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036047 |
| DBxref | InterPro:IPR036322 |
| DBxref | InterPro:IPR017986 |
| DBxref | InterPro:IPR019775 |
| DBxref | InterPro:IPR015943 |
| DBxref | InterPro:IPR001680 |
| DBxref | InterPro:IPR001810 |
| DBxref | InterPro:IPR020472 |
| DBxref | PFAM:PF00400 |
| DBxref | PFAM:PF12937 |
| DBxref | PFAM:PF00646 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An02 | supercontig | An02:1845115..1847146 - |
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