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Sequences
The following sequences are available for this feature:
mRNA from alignment at An02:2121188..2123135+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_001918-T1 ID=CBS51388_001918-T1|Name=CBS51388_001918-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1948bp|location=Sequence derived from alignment at An02:2121188..2123135+ (Aspergillus niger CBS 513.88)
ATGTCGAAGGGTTGCTACACCTGTCGTCGTCGCCGCATCATTTGCGACAA
CGGCTTGCCCACATGCCGCAAGTGCCGCGATGCGGGGAAGGAATGTCTGG
GGTATCAGAAGCCTCTCGTTTGGGTCAAGGGAGGTGTGGCCAGTCGCGGA
AAGATGATGGGTCGCAGCTTTAATGAGGTTATGCGTCCTTCAGATCTCAG
GCGCGGTGACTCGAGCCCCTCTTCCAGCAGCAATGCGTCGCCGCCGTCAG
CAGCCGATTCGCCCACCCAGTCTATAGATATCAGCTTATGCGTACCCCCC
AACGTGTCGGGCATCCAGGGTATCCTAGAACCAACCCAGTCGGAGGATAA
CGATAACCAGGATACTCAAGTGGTCTTGCAAAGAGCTACACCGGTCTCCG
CGCCTTGGGGCATGGTGGACCCGCTGTTCAAGGACCTGAGTCAGCTGTCG
CGGTTCTACATTGTGCATTGTATGTTTGCTCGTTTTCTCTGCCCATGTGA
TTCCTGTCTAACCATTCCGAAGTCAACCAGAACCTTGCCAACTATCTCAC
CCTCTACTCCGAGACCGGCAACCCGTACCGTGACCTCATTCCCCTGGTCG
GGGACTCTCCTCTCCTCGCCCACGTCCTTGCTGCCACCGGTGCCTTGCAT
TATGCCATCCTGGCGAGCGGGGACTTTTCCCTGACGCCATGGTTGTCGGA
AGGTTCTCCCGCAGACCGCACATCCCTGTCTCCTGAAGAGGTAGAAAAGT
CCGTGATCACCTCCATGTCTCGGCGTCCGTCGTCCAAGGTGTATGAACAT
TTTCTCGGACTTAAGCAGCGCGCCCTAGGGCAGTTATCGAGCGACATTCA
GGATCCCGTCTTGCGCAATGATAACAGAACTCTCGCTGCGATCACCGTGC
TCGCTTTGATGGATGCTATTGAATCGGGGGATGGTGCCTGGAAGTTCCAC
CTCGAAGGGGCCAAGAAGCTGCTTAAAGGCCGCCAAGAACAGGGGGCCTC
CAGTCCGCCTCAATGCCTTGTCAAGTGGCTGGAAGATTTCGCTGTCGATG
GCATTCTCCTGTAAGTCATATAAACATCGTCCACAGAGACACTACATACT
GACACATCCCTCCCAGCATCCAACTCATGGGCTCCACCCTCGCTCGCCCA
GGGTCCCTATCCAAACCCTTCTACACCTCCAGCATGGGCCCCGCCATGCT
CAAGCGTCTCGAAGAAACCTCCTACGTCGGCTGTCCAGCCTATCTCCTCG
AAGTCATCCTGCTCATCCACGCCGGTCTCTACTTCGACCCGGACGTCGAC
CCCAACTCGCAACCCTCCATGATCTTCACCTCTGCCTTCCTCTCCCAAGA
CTCCAACCCGCTCCAATCCCCCGGCGCTCTCCTCCAACACATCCAAGCCT
TCGACCCCTATGCCTGGGCCGAGTCCATGCAAAGCTGCTACTACCTCGCA
GACCTGTCCATGCGAACCGCCCTGGCAACCGTCTTCAAAGGCGCCGTCTA
CCTCTACGCCAGCCGTGTTCTCTCCCGACCGCGTCCCGGCGCCGCAACCA
TCCCCAACCACTTCGGTCTCCCCTCCGACCACGCCGAAGTGGCAGACCTG
ATCATTCGCAAAATCGCTCTCATCCCTATCGAAGATCCCCACTTCAAATG
CCTCATCTGGCCCACCTTCATTGCTGGCGCGGAATGCCGAGACCCCGTCC
AGCGACCCTTTGTACTCAACAAGTTGCGCGCGTTGTACTTCAACATCACC
AGCGTAAATGTCCGCAATGCGGCTTGGGTTTTGAGCTTGATGTGGCAGAA
ACAGGATCAGAAGAAGGCTGAGAAGCAACAGCAGCAGCAACGGCCTACCA
CTGATATTCATTCCCATGACGATAATAATGATGATGACGATGACTTTGAT
TGGATTCAGGAATTGGATAATTCCAGAATTGACTGGTTGTTTATATAA back to topCoding sequence (CDS) from alignment at An02:2121188..2123135+ >CBS51388_001918-T1 ID=CBS51388_001918-T1|Name=CBS51388_001918-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=5517bp|location=Sequence derived from alignment at An02:2121188..2123135+ (Aspergillus niger CBS 513.88)
ATGTCGAAGGGTTGCTACACCTGTCGTCGTCGCCGCATCATTTGCGACAA
CGGCTTGCCCACATGCCGCAAGTGCCGCGATGCGGGGAAGGAATGTCTGG
GGTATCAGAAGCCTCTCGTTTGGGTCAAGGGAGGTGTGGCCAGTCGCGGA
AAGATGATGGGTCGCAGCTTTAATGAGGTTATGCGTCCTTCAGATCTCAG
GCGCGGTGACTCGAGCCCCTCTTCCAGCAGCAATGCGTCGCCGCCGTCAG
CAGCCGATTCGCCCACCCAGTCTATAGATATCAGCTTATGCGTACCCCCC
AACGTGTCGGGCATCCAGGGTATCCTAGAACCAACCCAGTCGGAGGATAA
CGATAACCAGGATACTCAAGTGGTCTTGCAAAGAGCTACACCGGTCTCCG
CGCCTTGGGGCATGGTGGACCCGCTGTTCAAGGACCTGAGTCAGCTGTCG
CGGTTCTACATTGTGCATTTCAACCAGAACCTTGCCAACTATCTCACCCT
CTACTCCGAGACCGGCAACCCGTACCGTGACCTCATTCCCCTGGTCGGGG
ACTCTCCTCTCCTCGCCCACGTCCTTGCTGCCACCGGTGCCTTGCATTAT
GCCATCCTGGCGAGCGGGGACTTTTCCCTGACGCCATGGTTGTCGGAAGG
TTCTCCCGCAGACCGCACATCCCTGTCTCCTGAAGAGGTAGAAAAGTCCG
TGATCACCTCCATGTCTCGGCGTCCGTCGTCCAAGGTGTATGAACATTTT
CTCGGACTTAAGCAGCGCGCCCTAGGGCAGTTATCGAGCGACATTCAGGA
TCCCGTCTTGCGCAATGATAACAGAACTCTCGCTGCGATCACCGTGCTCG
CTTTGATGGATGCTATTGAATCGGGGGATGGTGCCTGGAAGTTCCACCTC
GAAGGGGCCAAGAAGCTGCTTAAAGGCCGCCAAGAACAGGGGGCCTCCAG
TCCGCCTCAATGCCTTGTCAAGTGGCTGGAAGATTTCGCTGTCGATGGCA
TTCTCCTCATCCAACTCATGGGCTCCACCCTCGCTCGCCCAGGGTCCCTA
TCCAAACCCTTCTACACCTCCAGCATGGGCCCCGCCATGCTCAAGCGTCT
CGAAGAAACCTCCTACGTCGGCTGTCCAGCCTATCTCCTCGAAGTCATCC
TGCTCATCCACGCCGGTCTCTACTTCGACCCGGACGTCGACCCCAACTCG
CAACCCTCCATGATCTTCACCTCTGCCTTCCTCTCCCAAGACTCCAACCC
GCTCCAATCCCCCGGCGCTCTCCTCCAACACATCCAAGCCTTCGACCCCT
ATGCCTGGGCCGAGTCCATGCAAAGCTGCTACTACCTCGCAGACCTGTCC
ATGCGAACCGCCCTGGCAACCGTCTTCAAAGGCGCCGTCTACCTCTACGC
CAGCCGTGTTCTCTCCCGACCGCGTCCCGGCGCCGCAACCATCCCCAACC
ACTTCGGTCTCCCCTCCGACCACGCCGAAGTGGCAGACCTGATCATTCGC
AAAATCGCTCTCATCCCTATCGAAGATCCCCACTTCAAATGCCTCATCTG
GCCCACCTTCATTGCTGGCGCGGAATGCCGAGACCCCGTCCAGCGACCCT
TTGTACTCAACAAGTTGCGCGCGTTGTACTTCAACATCACCAGCGTAAAT
GTCCGCAATGCGGCTTGGGTTTTGAGCTTGATGTGGCAGAAACAGGATCA
GAAGAAGGCTGAGAAGCAACAGCAGCAGCAACGGCCTACCACTGATATTC
ATTCCCATGACGATAATAATGATGATGACGATGACTTTGATTGGATTCAG
GAATTGGATAATTCCAGAATTGACTGGTTGTTTATATAAATGTCGAAGGG
TTGCTACACCTGTCGTCGTCGCCGCATCATTTGCGACAACGGCTTGCCCA
CATGCCGCAAGTGCCGCGATGCGGGGAAGGAATGTCTGGGGTATCAGAAG
CCTCTCGTTTGGGTCAAGGGAGGTGTGGCCAGTCGCGGAAAGATGATGGG
TCGCAGCTTTAATGAGGTTATGCGTCCTTCAGATCTCAGGCGCGGTGACT
CGAGCCCCTCTTCCAGCAGCAATGCGTCGCCGCCGTCAGCAGCCGATTCG
CCCACCCAGTCTATAGATATCAGCTTATGCGTACCCCCCAACGTGTCGGG
CATCCAGGGTATCCTAGAACCAACCCAGTCGGAGGATAACGATAACCAGG
ATACTCAAGTGGTCTTGCAAAGAGCTACACCGGTCTCCGCGCCTTGGGGC
ATGGTGGACCCGCTGTTCAAGGACCTGAGTCAGCTGTCGCGGTTCTACAT
TGTGCATTTCAACCAGAACCTTGCCAACTATCTCACCCTCTACTCCGAGA
CCGGCAACCCGTACCGTGACCTCATTCCCCTGGTCGGGGACTCTCCTCTC
CTCGCCCACGTCCTTGCTGCCACCGGTGCCTTGCATTATGCCATCCTGGC
GAGCGGGGACTTTTCCCTGACGCCATGGTTGTCGGAAGGTTCTCCCGCAG
ACCGCACATCCCTGTCTCCTGAAGAGGTAGAAAAGTCCGTGATCACCTCC
ATGTCTCGGCGTCCGTCGTCCAAGGTGTATGAACATTTTCTCGGACTTAA
GCAGCGCGCCCTAGGGCAGTTATCGAGCGACATTCAGGATCCCGTCTTGC
GCAATGATAACAGAACTCTCGCTGCGATCACCGTGCTCGCTTTGATGGAT
GCTATTGAATCGGGGGATGGTGCCTGGAAGTTCCACCTCGAAGGGGCCAA
GAAGCTGCTTAAAGGCCGCCAAGAACAGGGGGCCTCCAGTCCGCCTCAAT
GCCTTGTCAAGTGGCTGGAAGATTTCGCTGTCGATGGCATTCTCCTCATC
CAACTCATGGGCTCCACCCTCGCTCGCCCAGGGTCCCTATCCAAACCCTT
CTACACCTCCAGCATGGGCCCCGCCATGCTCAAGCGTCTCGAAGAAACCT
CCTACGTCGGCTGTCCAGCCTATCTCCTCGAAGTCATCCTGCTCATCCAC
GCCGGTCTCTACTTCGACCCGGACGTCGACCCCAACTCGCAACCCTCCAT
GATCTTCACCTCTGCCTTCCTCTCCCAAGACTCCAACCCGCTCCAATCCC
CCGGCGCTCTCCTCCAACACATCCAAGCCTTCGACCCCTATGCCTGGGCC
GAGTCCATGCAAAGCTGCTACTACCTCGCAGACCTGTCCATGCGAACCGC
CCTGGCAACCGTCTTCAAAGGCGCCGTCTACCTCTACGCCAGCCGTGTTC
TCTCCCGACCGCGTCCCGGCGCCGCAACCATCCCCAACCACTTCGGTCTC
CCCTCCGACCACGCCGAAGTGGCAGACCTGATCATTCGCAAAATCGCTCT
CATCCCTATCGAAGATCCCCACTTCAAATGCCTCATCTGGCCCACCTTCA
TTGCTGGCGCGGAATGCCGAGACCCCGTCCAGCGACCCTTTGTACTCAAC
AAGTTGCGCGCGTTGTACTTCAACATCACCAGCGTAAATGTCCGCAATGC
GGCTTGGGTTTTGAGCTTGATGTGGCAGAAACAGGATCAGAAGAAGGCTG
AGAAGCAACAGCAGCAGCAACGGCCTACCACTGATATTCATTCCCATGAC
GATAATAATGATGATGACGATGACTTTGATTGGATTCAGGAATTGGATAA
TTCCAGAATTGACTGGTTGTTTATATAAATGTCGAAGGGTTGCTACACCT
GTCGTCGTCGCCGCATCATTTGCGACAACGGCTTGCCCACATGCCGCAAG
TGCCGCGATGCGGGGAAGGAATGTCTGGGGTATCAGAAGCCTCTCGTTTG
GGTCAAGGGAGGTGTGGCCAGTCGCGGAAAGATGATGGGTCGCAGCTTTA
ATGAGGTTATGCGTCCTTCAGATCTCAGGCGCGGTGACTCGAGCCCCTCT
TCCAGCAGCAATGCGTCGCCGCCGTCAGCAGCCGATTCGCCCACCCAGTC
TATAGATATCAGCTTATGCGTACCCCCCAACGTGTCGGGCATCCAGGGTA
TCCTAGAACCAACCCAGTCGGAGGATAACGATAACCAGGATACTCAAGTG
GTCTTGCAAAGAGCTACACCGGTCTCCGCGCCTTGGGGCATGGTGGACCC
GCTGTTCAAGGACCTGAGTCAGCTGTCGCGGTTCTACATTGTGCATTTCA
ACCAGAACCTTGCCAACTATCTCACCCTCTACTCCGAGACCGGCAACCCG
TACCGTGACCTCATTCCCCTGGTCGGGGACTCTCCTCTCCTCGCCCACGT
CCTTGCTGCCACCGGTGCCTTGCATTATGCCATCCTGGCGAGCGGGGACT
TTTCCCTGACGCCATGGTTGTCGGAAGGTTCTCCCGCAGACCGCACATCC
CTGTCTCCTGAAGAGGTAGAAAAGTCCGTGATCACCTCCATGTCTCGGCG
TCCGTCGTCCAAGGTGTATGAACATTTTCTCGGACTTAAGCAGCGCGCCC
TAGGGCAGTTATCGAGCGACATTCAGGATCCCGTCTTGCGCAATGATAAC
AGAACTCTCGCTGCGATCACCGTGCTCGCTTTGATGGATGCTATTGAATC
GGGGGATGGTGCCTGGAAGTTCCACCTCGAAGGGGCCAAGAAGCTGCTTA
AAGGCCGCCAAGAACAGGGGGCCTCCAGTCCGCCTCAATGCCTTGTCAAG
TGGCTGGAAGATTTCGCTGTCGATGGCATTCTCCTCATCCAACTCATGGG
CTCCACCCTCGCTCGCCCAGGGTCCCTATCCAAACCCTTCTACACCTCCA
GCATGGGCCCCGCCATGCTCAAGCGTCTCGAAGAAACCTCCTACGTCGGC
TGTCCAGCCTATCTCCTCGAAGTCATCCTGCTCATCCACGCCGGTCTCTA
CTTCGACCCGGACGTCGACCCCAACTCGCAACCCTCCATGATCTTCACCT
CTGCCTTCCTCTCCCAAGACTCCAACCCGCTCCAATCCCCCGGCGCTCTC
CTCCAACACATCCAAGCCTTCGACCCCTATGCCTGGGCCGAGTCCATGCA
AAGCTGCTACTACCTCGCAGACCTGTCCATGCGAACCGCCCTGGCAACCG
TCTTCAAAGGCGCCGTCTACCTCTACGCCAGCCGTGTTCTCTCCCGACCG
CGTCCCGGCGCCGCAACCATCCCCAACCACTTCGGTCTCCCCTCCGACCA
CGCCGAAGTGGCAGACCTGATCATTCGCAAAATCGCTCTCATCCCTATCG
AAGATCCCCACTTCAAATGCCTCATCTGGCCCACCTTCATTGCTGGCGCG
GAATGCCGAGACCCCGTCCAGCGACCCTTTGTACTCAACAAGTTGCGCGC
GTTGTACTTCAACATCACCAGCGTAAATGTCCGCAATGCGGCTTGGGTTT
TGAGCTTGATGTGGCAGAAACAGGATCAGAAGAAGGCTGAGAAGCAACAG
CAGCAGCAACGGCCTACCACTGATATTCATTCCCATGACGATAATAATGA
TGATGACGATGACTTTGATTGGATTCAGGAATTGGATAATTCCAGAATTG
ACTGGTTGTTTATATAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0042025 | host cell nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
| GO:0008270 | zinc ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR021858 |
| DBxref | InterPro:IPR001138 |
| DBxref | PFAM:PF00172 |
| DBxref | PFAM:PF11951 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An02 | supercontig | An02:2121188..2123135 + |
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