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Sequences
The following sequences are available for this feature:
mRNA from alignment at An02:3031053..3032311- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_002214-T1 ID=CBS51388_002214-T1|Name=CBS51388_002214-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1259bp|location=Sequence derived from alignment at An02:3031053..3032311- (Aspergillus niger CBS 513.88)
ATGCTCCTCCACGGCCTTCTGCTGGCCCTCCAGGCCATTCTAGCCTCCTC
AGCAGCCATAACCTCCCCATCTTCAAACCATCTCTCAACGGCAGCTCGCG
AGAAATGCCAAACAACCCTCCAATGCCCCCCAGGCACCCTCATCGTCTCC
AACACCCACCCCCAACTCTCCAACTTCACCACCCTCCAAGCAGCCATCAA
TGCCCTCCCCAACGACAACTCCTCCCAAACCATCCTCCTCCTCTCCGGCT
CCTACAATGAACAAGTCAACATCACCCGCTCCGGCCCCATCACCCTCCTG
GGCCAGCAGCCAGACCGCGCAGCCCTAACCGACCCTGCCCGCAACACCGT
CAACCTCACCTTCGCCGGCGCCAACAGCGACAGCACCGGCGACATCGACA
ACGTCTGGTTCAGCGTCATGGTCGTAGCTCCGACCCTGGACGCGAGTCTC
ACCGGCTCCGGCACAACAGGATATCCAGTGCCAGCGGACACCCCGTTCGG
GAACACTGATTTCCGCGTGTACAATATCGACTTCCGCAATACCTATGCGC
CGTACTCTGCTGGTCCGGCGCATGCCATTAGTTTTAGTCGCTCCAATGGA
GGGTTTTACTACTGCGGGTTCTACTCTTACCAGGATACTGTACTTCCCCC
TCCCTCCCCCTCAACCCTATCCCCCCCAACCACAATACTAACAAGTAAAC
CCAGATCTACATCGGCAAACTCGGCTCCGCATACATGTACAAATCCATTC
TCGCGGGCCAAACCGACTTCCTATACGGCTTCGGCACGCTCTTCATCCAA
TCATCCCAGATCGTCCTCCGCTCATGCGGCGGCGGCATCACCGCCTGGAA
GGGCACCAACACAACAGTCCGGAACAACTACGGCGTATACATCCACGACT
CGACCGTAAACGCAGCGAACACCTCCATCGCAGAACAAATCAAGGGATCC
TGCGCCCTAGGCAGACCGTGGAACTCACTGCACCGATCCATCTTCGCGAA
CACATACGAAGACGGGAGCATCGAGCCATCGGGATACATCAACTGGGAGG
ATCGGTGGAGTAAAAACGAGACGCTGATGGCGGAGTATAAGGCGTACGGG
CCAGGATTCAACCTCACAGGGAGGAGAGAGAGCGAAGTGTCAGTGTTATT
GAGTAGCAGCGAGGAGGAGAGGTATCGGGATCCGAGCAGGCTGTTTTTGT
TCGAGGATGGAAGGGAGGGCAATGTGGCGTGGATAGATTGGGATGTGGTC
TCCTCTTGA back to topCoding sequence (CDS) from alignment at An02:3031053..3032311- >CBS51388_002214-T1 ID=CBS51388_002214-T1|Name=CBS51388_002214-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2388bp|location=Sequence derived from alignment at An02:3031053..3032311- (Aspergillus niger CBS 513.88)
ATCTACATCGGCAAACTCGGCTCCGCATACATGTACAAATCCATTCTCGC
GGGCCAAACCGACTTCCTATACGGCTTCGGCACGCTCTTCATCCAATCAT
CCCAGATCGTCCTCCGCTCATGCGGCGGCGGCATCACCGCCTGGAAGGGC
ACCAACACAACAGTCCGGAACAACTACGGCGTATACATCCACGACTCGAC
CGTAAACGCAGCGAACACCTCCATCGCAGAACAAATCAAGGGATCCTGCG
CCCTAGGCAGACCGTGGAACTCACTGCACCGATCCATCTTCGCGAACACA
TACGAAGACGGGAGCATCGAGCCATCGGGATACATCAACTGGGAGGATCG
GTGGAGTAAAAACGAGACGCTGATGGCGGAGTATAAGGCGTACGGGCCAG
GATTCAACCTCACAGGGAGGAGAGAGAGCGAAGTGTCAGTGTTATTGAGT
AGCAGCGAGGAGGAGAGGTATCGGGATCCGAGCAGGCTGTTTTTGTTCGA
GGATGGAAGGGAGGGCAATGTGGCGTGGATAGATTGGGATGTGGTCTCCT
CTTGAATGCTCCTCCACGGCCTTCTGCTGGCCCTCCAGGCCATTCTAGCC
TCCTCAGCAGCCATAACCTCCCCATCTTCAAACCATCTCTCAACGGCAGC
TCGCGAGAAATGCCAAACAACCCTCCAATGCCCCCCAGGCACCCTCATCG
TCTCCAACACCCACCCCCAACTCTCCAACTTCACCACCCTCCAAGCAGCC
ATCAATGCCCTCCCCAACGACAACTCCTCCCAAACCATCCTCCTCCTCTC
CGGCTCCTACAATGAACAAGTCAACATCACCCGCTCCGGCCCCATCACCC
TCCTGGGCCAGCAGCCAGACCGCGCAGCCCTAACCGACCCTGCCCGCAAC
ACCGTCAACCTCACCTTCGCCGGCGCCAACAGCGACAGCACCGGCGACAT
CGACAACGTCTGGTTCAGCGTCATGGTCGTAGCTCCGACCCTGGACGCGA
GTCTCACCGGCTCCGGCACAACAGGATATCCAGTGCCAGCGGACACCCCG
TTCGGGAACACTGATTTCCGCGTGTACAATATCGACTTCCGCAATACCTA
TGCGCCGTACTCTGCTGGTCCGGCGCATGCCATTAGTTTTAGTCGCTCCA
ATGGAGGGTTTTACTACTGCGGGTTCTACTCTTACCAGGATACTATCTAC
ATCGGCAAACTCGGCTCCGCATACATGTACAAATCCATTCTCGCGGGCCA
AACCGACTTCCTATACGGCTTCGGCACGCTCTTCATCCAATCATCCCAGA
TCGTCCTCCGCTCATGCGGCGGCGGCATCACCGCCTGGAAGGGCACCAAC
ACAACAGTCCGGAACAACTACGGCGTATACATCCACGACTCGACCGTAAA
CGCAGCGAACACCTCCATCGCAGAACAAATCAAGGGATCCTGCGCCCTAG
GCAGACCGTGGAACTCACTGCACCGATCCATCTTCGCGAACACATACGAA
GACGGGAGCATCGAGCCATCGGGATACATCAACTGGGAGGATCGGTGGAG
TAAAAACGAGACGCTGATGGCGGAGTATAAGGCGTACGGGCCAGGATTCA
ACCTCACAGGGAGGAGAGAGAGCGAAGTGTCAGTGTTATTGAGTAGCAGC
GAGGAGGAGAGGTATCGGGATCCGAGCAGGCTGTTTTTGTTCGAGGATGG
AAGGGAGGGCAATGTGGCGTGGATAGATTGGGATGTGGTCTCCTCTTGAA
TGCTCCTCCACGGCCTTCTGCTGGCCCTCCAGGCCATTCTAGCCTCCTCA
GCAGCCATAACCTCCCCATCTTCAAACCATCTCTCAACGGCAGCTCGCGA
GAAATGCCAAACAACCCTCCAATGCCCCCCAGGCACCCTCATCGTCTCCA
ACACCCACCCCCAACTCTCCAACTTCACCACCCTCCAAGCAGCCATCAAT
GCCCTCCCCAACGACAACTCCTCCCAAACCATCCTCCTCCTCTCCGGCTC
CTACAATGAACAAGTCAACATCACCCGCTCCGGCCCCATCACCCTCCTGG
GCCAGCAGCCAGACCGCGCAGCCCTAACCGACCCTGCCCGCAACACCGTC
AACCTCACCTTCGCCGGCGCCAACAGCGACAGCACCGGCGACATCGACAA
CGTCTGGTTCAGCGTCATGGTCGTAGCTCCGACCCTGGACGCGAGTCTCA
CCGGCTCCGGCACAACAGGATATCCAGTGCCAGCGGACACCCCGTTCGGG
AACACTGATTTCCGCGTGTACAATATCGACTTCCGCAATACCTATGCGCC
GTACTCTGCTGGTCCGGCGCATGCCATTAGTTTTAGTCGCTCCAATGGAG
GGTTTTACTACTGCGGGTTCTACTCTTACCAGGATACT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0030599 | pectinesterase activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0042545 | cell wall modification |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-18) |
| Note | CAZy:CE8 |
| DBxref | InterPro:IPR011050 |
| DBxref | InterPro:IPR012334 |
| DBxref | InterPro:IPR000070 |
| DBxref | PFAM:PF01095 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An02 | supercontig | An02:3031053..3032311 - |
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