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Sequences
The following sequences are available for this feature:
mRNA from alignment at An02:3565162..3566593- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_002386-T1 ID=CBS51388_002386-T1|Name=CBS51388_002386-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1432bp|location=Sequence derived from alignment at An02:3565162..3566593- (Aspergillus niger CBS 513.88)
ATGGCTACACAGAAAGCTGCTCAGTGGGCAGCGTCCCTAACGTATTCTTC
GCTACCTCCGGACGCCCTCCAAGCGGCCATCCGGAGCTTCTACAACTGGG
TCGGCTGCACTGTCGGGGGCAGCAATCACCCCGCTGCTTCGATTGCCCGG
AACTCTTTGTCCCGCTTTTTCGGGTCTCCAACTTCAACATTGTTAGGTAC
TAATGGGCTTCAAGCTGATGCGCAGCATGCTGCGTTGATCAATGGAATTG
CATCGCACGTCCACGATTATGATGACACGCACTTGGAGACCATCATACAC
CCTACTGGGCCTGTTGCGGCAGCTCTTCTAAGCTTTGCGCAGTCACTAGA
TCGGCCAGTATCTGGACAGGATTTCCTCGCGGCTCTCGCCGCCGGGATAG
AATTAGAATGCAAGGCTGGTCTGGCTGTCTGGCCGAGCCACTATGATGTG
GGCTGGTATGTCTGCTAGGCTTCTTGCCCTCCCGGACCCCTCACCCAAAA
CAGCGCGGTATGATGGACTGACACCGTTCTTTAGGCACATCACTAGTACC
ACTGGTTCTATTGGGGCAGCAGTGGCGGTGTCTCGCCTTCTCGGCCTGAG
TCCGGAGAAGACGGCTCATGCCATCGGTATCGCCGCCACCCAGGTGACTG
GTCTTCGTGAGATGTTTGGCTCGCACACCAAGTCCTTTCACCCTGGGCGC
GCAGCCCAAAATGGCCTTCTAGCGGCTATTCTTGCTGCAGATGGATATAC
CAGTTCTTTGCAGGCTCTGGAGGCCAAGCGGGGCTGGGTGAATGTCGTTA
GTAATGACGACAAGTTAACACAGGAAATTGACAGCCTGGAATCCGACGGA
AAGTGGGAACTTGCGAAAAATGCCTTTAAGCCGTTCCCGTGTGGTATTGT
CATACACCCGGTCATTGATGGCTGTGTTTGGCTACATGGTGAGCTGCAAC
GGCGGGGCCTCAGACTACAAGATATCAAGAGTGTTCATGTCACAGTTCAC
CCACTTGTCTTGGAGCTAACGGGGAAAACAAAACCTAAAGACGGGCTGGA
AGCCAAGTTCAGCGTATATCACGGCGGTGCTATTGGCTTGATTCACGGAA
AGGCGACACCGGCAGAGTATGAAGATAATGTTGTCACAAATCCGGAAACG
ATAGAGGTACGAGACAAGTTTGTGGCAATAGCGGCGGATAATATCCGAGC
GGATGAATGCCGGATTCTGGTTGAGTTTGAAGCCCCGGAGGTCAAGATAG
AGAAGCATGTGCACCATGCAGTTGGCAGTATCGACGCCCCCATGACGGAC
AGCCAGCTCACGGAGAAGTTCATTGGCCAGTGTAGTCCAATTCTTGGCCC
ACAACAGGCAAAGATAATCAGCGATTGGTGCTGGAGCTTGGAAACAAAGG
ATGACGTCCGGCAGATTGGACGGTTCCTATAG back to topCoding sequence (CDS) from alignment at An02:3565162..3566593- >CBS51388_002386-T1 ID=CBS51388_002386-T1|Name=CBS51388_002386-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2706bp|location=Sequence derived from alignment at An02:3565162..3566593- (Aspergillus niger CBS 513.88)
GCACATCACTAGTACCACTGGTTCTATTGGGGCAGCAGTGGCGGTGTCTC
GCCTTCTCGGCCTGAGTCCGGAGAAGACGGCTCATGCCATCGGTATCGCC
GCCACCCAGGTGACTGGTCTTCGTGAGATGTTTGGCTCGCACACCAAGTC
CTTTCACCCTGGGCGCGCAGCCCAAAATGGCCTTCTAGCGGCTATTCTTG
CTGCAGATGGATATACCAGTTCTTTGCAGGCTCTGGAGGCCAAGCGGGGC
TGGGTGAATGTCGTTAGTAATGACGACAAGTTAACACAGGAAATTGACAG
CCTGGAATCCGACGGAAAGTGGGAACTTGCGAAAAATGCCTTTAAGCCGT
TCCCGTGTGGTATTGTCATACACCCGGTCATTGATGGCTGTGTTTGGCTA
CATGGTGAGCTGCAACGGCGGGGCCTCAGACTACAAGATATCAAGAGTGT
TCATGTCACAGTTCACCCACTTGTCTTGGAGCTAACGGGGAAAACAAAAC
CTAAAGACGGGCTGGAAGCCAAGTTCAGCGTATATCACGGCGGTGCTATT
GGCTTGATTCACGGAAAGGCGACACCGGCAGAGTATGAAGATAATGTTGT
CACAAATCCGGAAACGATAGAGGTACGAGACAAGTTTGTGGCAATAGCGG
CGGATAATATCCGAGCGGATGAATGCCGGATTCTGGTTGAGTTTGAAGCC
CCGGAGGTCAAGATAGAGAAGCATGTGCACCATGCAGTTGGCAGTATCGA
CGCCCCCATGACGGACAGCCAGCTCACGGAGAAGTTCATTGGCCAGTGTA
GTCCAATTCTTGGCCCACAACAGGCAAAGATAATCAGCGATTGGTGCTGG
AGCTTGGAAACAAAGGATGACGTCCGGCAGATTGGACGGTTCCTATAGAT
GGCTACACAGAAAGCTGCTCAGTGGGCAGCGTCCCTAACGTATTCTTCGC
TACCTCCGGACGCCCTCCAAGCGGCCATCCGGAGCTTCTACAACTGGGTC
GGCTGCACTGTCGGGGGCAGCAATCACCCCGCTGCTTCGATTGCCCGGAA
CTCTTTGTCCCGCTTTTTCGGGTCTCCAACTTCAACATTGTTAGGTACTA
ATGGGCTTCAAGCTGATGCGCAGCATGCTGCGTTGATCAATGGAATTGCA
TCGCACGTCCACGATTATGATGACACGCACTTGGAGACCATCATACACCC
TACTGGGCCTGTTGCGGCAGCTCTTCTAAGCTTTGCGCAGTCACTAGATC
GGCCAGTATCTGGACAGGATTTCCTCGCGGCTCTCGCCGCCGGGATAGAA
TTAGAATGCAAGGCTGGTCTGGCTGTCTGGCCGAGCCACTATGATGTGGG
CTGGCACATCACTAGTACCACTGGTTCTATTGGGGCAGCAGTGGCGGTGT
CTCGCCTTCTCGGCCTGAGTCCGGAGAAGACGGCTCATGCCATCGGTATC
GCCGCCACCCAGGTGACTGGTCTTCGTGAGATGTTTGGCTCGCACACCAA
GTCCTTTCACCCTGGGCGCGCAGCCCAAAATGGCCTTCTAGCGGCTATTC
TTGCTGCAGATGGATATACCAGTTCTTTGCAGGCTCTGGAGGCCAAGCGG
GGCTGGGTGAATGTCGTTAGTAATGACGACAAGTTAACACAGGAAATTGA
CAGCCTGGAATCCGACGGAAAGTGGGAACTTGCGAAAAATGCCTTTAAGC
CGTTCCCGTGTGGTATTGTCATACACCCGGTCATTGATGGCTGTGTTTGG
CTACATGGTGAGCTGCAACGGCGGGGCCTCAGACTACAAGATATCAAGAG
TGTTCATGTCACAGTTCACCCACTTGTCTTGGAGCTAACGGGGAAAACAA
AACCTAAAGACGGGCTGGAAGCCAAGTTCAGCGTATATCACGGCGGTGCT
ATTGGCTTGATTCACGGAAAGGCGACACCGGCAGAGTATGAAGATAATGT
TGTCACAAATCCGGAAACGATAGAGGTACGAGACAAGTTTGTGGCAATAG
CGGCGGATAATATCCGAGCGGATGAATGCCGGATTCTGGTTGAGTTTGAA
GCCCCGGAGGTCAAGATAGAGAAGCATGTGCACCATGCAGTTGGCAGTAT
CGACGCCCCCATGACGGACAGCCAGCTCACGGAGAAGTTCATTGGCCAGT
GTAGTCCAATTCTTGGCCCACAACAGGCAAAGATAATCAGCGATTGGTGC
TGGAGCTTGGAAACAAAGGATGACGTCCGGCAGATTGGACGGTTCCTATA
GATGGCTACACAGAAAGCTGCTCAGTGGGCAGCGTCCCTAACGTATTCTT
CGCTACCTCCGGACGCCCTCCAAGCGGCCATCCGGAGCTTCTACAACTGG
GTCGGCTGCACTGTCGGGGGCAGCAATCACCCCGCTGCTTCGATTGCCCG
GAACTCTTTGTCCCGCTTTTTCGGGTCTCCAACTTCAACATTGTTAGGTA
CTAATGGGCTTCAAGCTGATGCGCAGCATGCTGCGTTGATCAATGGAATT
GCATCGCACGTCCACGATTATGATGACACGCACTTGGAGACCATCATACA
CCCTACTGGGCCTGTTGCGGCAGCTCTTCTAAGCTTTGCGCAGTCACTAG
ATCGGCCAGTATCTGGACAGGATTTCCTCGCGGCTCTCGCCGCCGGGATA
GAATTAGAATGCAAGGCTGGTCTGGCTGTCTGGCCGAGCCACTATGATGT
GGGCTG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016829 | lyase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036148 |
| DBxref | InterPro:IPR042188 |
| DBxref | InterPro:IPR042183 |
| DBxref | InterPro:IPR005656 |
| DBxref | PFAM:PF03972 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An02 | supercontig | An02:3565162..3566593 - |
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