You are here

Home

CBS51388_002616-T1, CBS51388_002616-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_002616-T1
Unique NameCBS51388_002616-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An03:540677..541940-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_002616-T1 ID=CBS51388_002616-T1|Name=CBS51388_002616-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1264bp|location=Sequence derived from alignment at An03:540677..541940- (Aspergillus niger CBS 513.88)
ATGAGCTCCCCGACAAACCGGAAGGGCTCACTGCCCCATCAATTGCGTAC
CGCTGCCGAACCCCGCCAGAACCGACTGTACAATGTCCGGCTGTCGCATG
TCGAACAGGCCAATCCTTTCGTGCGGCTACTACAGCTGACCATACCCCCG
GAGGTCCAGAATGCCGAAGATGAAGGTCAGGAAGTGGAAGAAGTATGATA
TTTCTTTCCTTTTTGTTTTTTCTATATAATAATTCCAACCACATACCTAT
AATTTTCATATTAACAGCAACATATCCGCTCCCCGACCAACCACATCGTG
CTAACACCCAACAGTTAGCCAATCCCCAACAACCTCTAACATTCCTTCCG
GGTCAATGGCTCGACGTTCATATCCCTTCTATCCCCAATGCAGGCGGCTT
CAGCATTACCTCCACTCCAGCCGACGCACAAGTCCTCCCATCCCTAGAAT
CTCCCGCGGAGGCAATCACAACCGACGAAACCGACGTTCCACCCATCGAC
CCGCGCGGTCGGCCACCCTACGTAGAGTTAGCTGTGCAATATGCGCCCTC
CAACCCAGCCAGCGCATGGCTCTGGCGACCGGCGGATGAGATCCTTGGCA
CGGAACTTAGTATCCGCGTCGGAGGGAGTTTTGTATGGCCTCCGTCTTCA
AACGTGGACTTAACGAAAGTTCGGAATGTAGTTTTCGTGGCAGGCGGGGT
AGGGATCAAGTGAGTGTGATGTCGATTCATAAACAGGAAAGAGAATTCGT
AGCTAACTACTAACACAACCACAGCCCACTAATGTCCATGCTATCGCATC
TGAACAATGGCGACGAGATAGCTCTCCCTCACCCGTCATTCAATATTCGA
TTTCTGTACTCAACGAAACTCCCACGGAAAGAAGAAGGAACAGTAACCGG
GAGTGGTGGTGGTGGCAGTAATAGTCTGGAGCAAATATTGTTCCTTTCAC
GTCTACGACAGATCATTGCGTCGCAGTCACAAATTTGTCGATTGCAGATT
AGTTTAGACCTTTTCATCACCGATCCTGGTTTGGATCAAAGTTCTCTTAC
TGGTTCTGCGGAATCTGATGATCTGACCCTGCATATGAGGAGGATTAATC
GGGATGATTTACGCAAGGCGATCAGTAATCCTGATGGTAGTATTGAGGCG
GCAGAGACTGTGTGTTATGTGTGTGGTCCGCCTGGGATGACTGATGATGT
GGTCGGCAACCTTGAGGGCTTTCTTGGGGATAAGGAGCGCGTGTATTATG
AAAAGTGGTGGTAA
back to top

Coding sequence (CDS) from alignment at An03:540677..541940-

>CBS51388_002616-T1 ID=CBS51388_002616-T1|Name=CBS51388_002616-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3231bp|location=Sequence derived from alignment at An03:540677..541940- (Aspergillus niger CBS 513.88)
CCCACTAATGTCCATGCTATCGCATCTGAACAATGGCGACGAGATAGCTC
TCCCTCACCCGTCATTCAATATTCGATTTCTGTACTCAACGAAACTCCCA
CGGAAAGAAGAAGGAACAGTAACCGGGAGTGGTGGTGGTGGCAGTAATAG
TCTGGAGCAAATATTGTTCCTTTCACGTCTACGACAGATCATTGCGTCGC
AGTCACAAATTTGTCGATTGCAGATTAGTTTAGACCTTTTCATCACCGAT
CCTGGTTTGGATCAAAGTTCTCTTACTGGTTCTGCGGAATCTGATGATCT
GACCCTGCATATGAGGAGGATTAATCGGGATGATTTACGCAAGGCGATCA
GTAATCCTGATGGTAGTATTGAGGCGGCAGAGACTGTGTGTTATGTGTGT
GGTCCGCCTGGGATGACTGATGATGTGGTCGGCAACCTTGAGGGCTTTCT
TGGGGATAAGGAGCGCGTGTATTATGAAAAGTGGTGGTAATTAGCCAATC
CCCAACAACCTCTAACATTCCTTCCGGGTCAATGGCTCGACGTTCATATC
CCTTCTATCCCCAATGCAGGCGGCTTCAGCATTACCTCCACTCCAGCCGA
CGCACAAGTCCTCCCATCCCTAGAATCTCCCGCGGAGGCAATCACAACCG
ACGAAACCGACGTTCCACCCATCGACCCGCGCGGTCGGCCACCCTACGTA
GAGTTAGCTGTGCAATATGCGCCCTCCAACCCAGCCAGCGCATGGCTCTG
GCGACCGGCGGATGAGATCCTTGGCACGGAACTTAGTATCCGCGTCGGAG
GGAGTTTTGTATGGCCTCCGTCTTCAAACGTGGACTTAACGAAAGTTCGG
AATGTAGTTTTCGTGGCAGGCGGGGTAGGGATCAAATGAGCTCCCCGACA
AACCGGAAGGGCTCACTGCCCCATCAATTGCGTACCGCTGCCGAACCCCG
CCAGAACCGACTGTACAATGTCCGGCTGTCGCATGTCGAACAGGCCAATC
CTTTCGTGCGGCTACTACAGCTGACCATACCCCCGGAGGTCCAGAATGCC
GAAGATGAAGGTCAGGAAGTGGAAGAACCCACTAATGTCCATGCTATCGC
ATCTGAACAATGGCGACGAGATAGCTCTCCCTCACCCGTCATTCAATATT
CGATTTCTGTACTCAACGAAACTCCCACGGAAAGAAGAAGGAACAGTAAC
CGGGAGTGGTGGTGGTGGCAGTAATAGTCTGGAGCAAATATTGTTCCTTT
CACGTCTACGACAGATCATTGCGTCGCAGTCACAAATTTGTCGATTGCAG
ATTAGTTTAGACCTTTTCATCACCGATCCTGGTTTGGATCAAAGTTCTCT
TACTGGTTCTGCGGAATCTGATGATCTGACCCTGCATATGAGGAGGATTA
ATCGGGATGATTTACGCAAGGCGATCAGTAATCCTGATGGTAGTATTGAG
GCGGCAGAGACTGTGTGTTATGTGTGTGGTCCGCCTGGGATGACTGATGA
TGTGGTCGGCAACCTTGAGGGCTTTCTTGGGGATAAGGAGCGCGTGTATT
ATGAAAAGTGGTGGTAATTAGCCAATCCCCAACAACCTCTAACATTCCTT
CCGGGTCAATGGCTCGACGTTCATATCCCTTCTATCCCCAATGCAGGCGG
CTTCAGCATTACCTCCACTCCAGCCGACGCACAAGTCCTCCCATCCCTAG
AATCTCCCGCGGAGGCAATCACAACCGACGAAACCGACGTTCCACCCATC
GACCCGCGCGGTCGGCCACCCTACGTAGAGTTAGCTGTGCAATATGCGCC
CTCCAACCCAGCCAGCGCATGGCTCTGGCGACCGGCGGATGAGATCCTTG
GCACGGAACTTAGTATCCGCGTCGGAGGGAGTTTTGTATGGCCTCCGTCT
TCAAACGTGGACTTAACGAAAGTTCGGAATGTAGTTTTCGTGGCAGGCGG
GGTAGGGATCAAATGAGCTCCCCGACAAACCGGAAGGGCTCACTGCCCCA
TCAATTGCGTACCGCTGCCGAACCCCGCCAGAACCGACTGTACAATGTCC
GGCTGTCGCATGTCGAACAGGCCAATCCTTTCGTGCGGCTACTACAGCTG
ACCATACCCCCGGAGGTCCAGAATGCCGAAGATGAAGGTCAGGAAGTGGA
AGAACCCACTAATGTCCATGCTATCGCATCTGAACAATGGCGACGAGATA
GCTCTCCCTCACCCGTCATTCAATATTCGATTTCTGTACTCAACGAAACT
CCCACGGAAAGAAGAAGGAACAGTAACCGGGAGTGGTGGTGGTGGCAGTA
ATAGTCTGGAGCAAATATTGTTCCTTTCACGTCTACGACAGATCATTGCG
TCGCAGTCACAAATTTGTCGATTGCAGATTAGTTTAGACCTTTTCATCAC
CGATCCTGGTTTGGATCAAAGTTCTCTTACTGGTTCTGCGGAATCTGATG
ATCTGACCCTGCATATGAGGAGGATTAATCGGGATGATTTACGCAAGGCG
ATCAGTAATCCTGATGGTAGTATTGAGGCGGCAGAGACTGTGTGTTATGT
GTGTGGTCCGCCTGGGATGACTGATGATGTGGTCGGCAACCTTGAGGGCT
TTCTTGGGGATAAGGAGCGCGTGTATTATGAAAAGTGGTGGTAATTAGCC
AATCCCCAACAACCTCTAACATTCCTTCCGGGTCAATGGCTCGACGTTCA
TATCCCTTCTATCCCCAATGCAGGCGGCTTCAGCATTACCTCCACTCCAG
CCGACGCACAAGTCCTCCCATCCCTAGAATCTCCCGCGGAGGCAATCACA
ACCGACGAAACCGACGTTCCACCCATCGACCCGCGCGGTCGGCCACCCTA
CGTAGAGTTAGCTGTGCAATATGCGCCCTCCAACCCAGCCAGCGCATGGC
TCTGGCGACCGGCGGATGAGATCCTTGGCACGGAACTTAGTATCCGCGTC
GGAGGGAGTTTTGTATGGCCTCCGTCTTCAAACGTGGACTTAACGAAAGT
TCGGAATGTAGTTTTCGTGGCAGGCGGGGTAGGGATCAAATGAGCTCCCC
GACAAACCGGAAGGGCTCACTGCCCCATCAATTGCGTACCGCTGCCGAAC
CCCGCCAGAACCGACTGTACAATGTCCGGCTGTCGCATGTCGAACAGGCC
AATCCTTTCGTGCGGCTACTACAGCTGACCATACCCCCGGAGGTCCAGAA
TGCCGAAGATGAAGGTCAGGAAGTGGAAGAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_002616CBS51388_002616Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_002616-T1CBS51388_002616-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_002616-T1.cdsCBS51388_002616-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_002616-T1.exon3CBS51388_002616-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_002616-T1.exon2CBS51388_002616-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_002616-T1.exon1CBS51388_002616-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR017927
DBxrefInterPro:IPR039261
DBxrefInterPro:IPR000951
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An03supercontigAn03:540677..541940 -
Powered by Drupal