|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at An04:625326..626744- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_003152-T1 ID=CBS51388_003152-T1|Name=CBS51388_003152-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1419bp|location=Sequence derived from alignment at An04:625326..626744- (Aspergillus niger CBS 513.88)
ATGGTTATGGCACCGACTGCTTGTGTACCTGCTGAAGTATGCACTCCTAA
ATACTACCAGGAGAAACACGACTATAATCTCAATTGGGATCATGGTCAAT
TCAGCAATCATGGAGGGGACGATTTATCGCAATCTAGGTTGGCTGCCAAG
GAACTAGTCTTGGACATCCTGAAGAAGCGCGCAGCTGAGGTCAATGTGGA
CAGCTGCGCGCCAGGAGAGGAGGACCCGTTTTACGTGGCAGATATGGGGG
GAGGTCTACCGCCAGCATCTGCGCTGGAAAATGAACTTGAGCCGTGTTCG
GCCTTTCTACGGTAAGGATATGAATGCACAACTGGGATTTTCATGACAGC
GGCTAACAGTGAGTCAATAGCGGTCAAGTGCAACCCCGACCCGGAGATCC
TTCGCCTCATGGCTAAACTCGGAAACGGTTTTGATTGTGCGTCCAAGGCC
GAGATCGATATGGCCCTCGAGACCGGCGTCGACCCAAGCCGCATCATCTA
CGCGCAGCCCTGCAAGACCAAGTCCTATCTGCGCTACGCCGCCCAGGTGG
GCGTCAAGCAGATGACCTTTGACAACGCCGACGAGCTGTACAAGATCAAG
GCCAACTACCCGGACGCCGAGCTTTATCTGCGCATCCTCACGGATGATTC
GAACAGCTTGTGCCAGTTCAGCATGAAATTCGGAGCTTCCTTGGACGTTG
CTCGCCAGCTCCTCGAATTGGCGCACCAGCTCGAGCTGAAGGTGGTCGGC
GTGAGTTTTCACGTCGGATCAGGCGCTGAGGATCCTAAGGCTTTCCTGAA
AGCCGTGCAGGACGCGCGCCTTGTGTTTGATCAAGCCGCAGAGATTGGCC
ACGAACTGCACACTTTGGATGTCGGCGGAGGTTTCTCCCAGGACACTTTT
GAGAAATTCGCCGGCGTCCTGAGCGAGGCGTTGGAGACCTATTTCCCGCC
CAACATCCGGGTCATTGCCGAACCGGGTCGCTACTATGTTGCCAATGCGT
TCACTCTGGCGGCCAACATCATTGCTCGCCGTGAGGTGCGCGACCCGGAG
GACCCGGCCAACGACGCCTACATGCTGTATCTCAACGACGGGGTGTATGG
AAACTTCTCCAACATCATCTTTGACCACCAGCACCCCGTGGCCCAGGTCC
TGACCTGTGCGTCGGCCGCTAACTCCCCTTATGCTGCGACTTCGGGGGGT
GTCACGTACTCCATCTGGGGGCCGACCTGTGACGGCATTGATGTTATCTC
CAAGCGCATTGCGCTGCCAGCTCTGCTGGAAGTTGGAGATTGGCTTTACT
TCGAGGAGATGGGAGCCTACACCAAGTGTAGCGCGACCCGCTTTAACGGC
TTTTCGGACAACCACGAGGTGATCTACATCTCCAGCGAAGCCGGGGCTTC
TGCGCTCCTCGAGTACTAG back to topCoding sequence (CDS) from alignment at An04:625326..626744- >CBS51388_003152-T1 ID=CBS51388_003152-T1|Name=CBS51388_003152-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2688bp|location=Sequence derived from alignment at An04:625326..626744- (Aspergillus niger CBS 513.88)
CGGTCAAGTGCAACCCCGACCCGGAGATCCTTCGCCTCATGGCTAAACTC
GGAAACGGTTTTGATTGTGCGTCCAAGGCCGAGATCGATATGGCCCTCGA
GACCGGCGTCGACCCAAGCCGCATCATCTACGCGCAGCCCTGCAAGACCA
AGTCCTATCTGCGCTACGCCGCCCAGGTGGGCGTCAAGCAGATGACCTTT
GACAACGCCGACGAGCTGTACAAGATCAAGGCCAACTACCCGGACGCCGA
GCTTTATCTGCGCATCCTCACGGATGATTCGAACAGCTTGTGCCAGTTCA
GCATGAAATTCGGAGCTTCCTTGGACGTTGCTCGCCAGCTCCTCGAATTG
GCGCACCAGCTCGAGCTGAAGGTGGTCGGCGTGAGTTTTCACGTCGGATC
AGGCGCTGAGGATCCTAAGGCTTTCCTGAAAGCCGTGCAGGACGCGCGCC
TTGTGTTTGATCAAGCCGCAGAGATTGGCCACGAACTGCACACTTTGGAT
GTCGGCGGAGGTTTCTCCCAGGACACTTTTGAGAAATTCGCCGGCGTCCT
GAGCGAGGCGTTGGAGACCTATTTCCCGCCCAACATCCGGGTCATTGCCG
AACCGGGTCGCTACTATGTTGCCAATGCGTTCACTCTGGCGGCCAACATC
ATTGCTCGCCGTGAGGTGCGCGACCCGGAGGACCCGGCCAACGACGCCTA
CATGCTGTATCTCAACGACGGGGTGTATGGAAACTTCTCCAACATCATCT
TTGACCACCAGCACCCCGTGGCCCAGGTCCTGACCTGTGCGTCGGCCGCT
AACTCCCCTTATGCTGCGACTTCGGGGGGTGTCACGTACTCCATCTGGGG
GCCGACCTGTGACGGCATTGATGTTATCTCCAAGCGCATTGCGCTGCCAG
CTCTGCTGGAAGTTGGAGATTGGCTTTACTTCGAGGAGATGGGAGCCTAC
ACCAAGTGTAGCGCGACCCGCTTTAACGGCTTTTCGGACAACCACGAGGT
GATCTACATCTCCAGCGAAGCCGGGGCTTCTGCGCTCCTCGAGTACTAGA
TGGTTATGGCACCGACTGCTTGTGTACCTGCTGAAGTATGCACTCCTAAA
TACTACCAGGAGAAACACGACTATAATCTCAATTGGGATCATGGTCAATT
CAGCAATCATGGAGGGGACGATTTATCGCAATCTAGGTTGGCTGCCAAGG
AACTAGTCTTGGACATCCTGAAGAAGCGCGCAGCTGAGGTCAATGTGGAC
AGCTGCGCGCCAGGAGAGGAGGACCCGTTTTACGTGGCAGATATGGGGGG
AGGTCTACCGCCAGCATCTGCGCTGGAAAATGAACTTGAGCCGTCGGTCA
AGTGCAACCCCGACCCGGAGATCCTTCGCCTCATGGCTAAACTCGGAAAC
GGTTTTGATTGTGCGTCCAAGGCCGAGATCGATATGGCCCTCGAGACCGG
CGTCGACCCAAGCCGCATCATCTACGCGCAGCCCTGCAAGACCAAGTCCT
ATCTGCGCTACGCCGCCCAGGTGGGCGTCAAGCAGATGACCTTTGACAAC
GCCGACGAGCTGTACAAGATCAAGGCCAACTACCCGGACGCCGAGCTTTA
TCTGCGCATCCTCACGGATGATTCGAACAGCTTGTGCCAGTTCAGCATGA
AATTCGGAGCTTCCTTGGACGTTGCTCGCCAGCTCCTCGAATTGGCGCAC
CAGCTCGAGCTGAAGGTGGTCGGCGTGAGTTTTCACGTCGGATCAGGCGC
TGAGGATCCTAAGGCTTTCCTGAAAGCCGTGCAGGACGCGCGCCTTGTGT
TTGATCAAGCCGCAGAGATTGGCCACGAACTGCACACTTTGGATGTCGGC
GGAGGTTTCTCCCAGGACACTTTTGAGAAATTCGCCGGCGTCCTGAGCGA
GGCGTTGGAGACCTATTTCCCGCCCAACATCCGGGTCATTGCCGAACCGG
GTCGCTACTATGTTGCCAATGCGTTCACTCTGGCGGCCAACATCATTGCT
CGCCGTGAGGTGCGCGACCCGGAGGACCCGGCCAACGACGCCTACATGCT
GTATCTCAACGACGGGGTGTATGGAAACTTCTCCAACATCATCTTTGACC
ACCAGCACCCCGTGGCCCAGGTCCTGACCTGTGCGTCGGCCGCTAACTCC
CCTTATGCTGCGACTTCGGGGGGTGTCACGTACTCCATCTGGGGGCCGAC
CTGTGACGGCATTGATGTTATCTCCAAGCGCATTGCGCTGCCAGCTCTGC
TGGAAGTTGGAGATTGGCTTTACTTCGAGGAGATGGGAGCCTACACCAAG
TGTAGCGCGACCCGCTTTAACGGCTTTTCGGACAACCACGAGGTGATCTA
CATCTCCAGCGAAGCCGGGGCTTCTGCGCTCCTCGAGTACTAGATGGTTA
TGGCACCGACTGCTTGTGTACCTGCTGAAGTATGCACTCCTAAATACTAC
CAGGAGAAACACGACTATAATCTCAATTGGGATCATGGTCAATTCAGCAA
TCATGGAGGGGACGATTTATCGCAATCTAGGTTGGCTGCCAAGGAACTAG
TCTTGGACATCCTGAAGAAGCGCGCAGCTGAGGTCAATGTGGACAGCTGC
GCGCCAGGAGAGGAGGACCCGTTTTACGTGGCAGATATGGGGGGAGGTCT
ACCGCCAGCATCTGCGCTGGAAAATGAACTTGAGCCGT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006596 | polyamine biosynthetic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003824 | catalytic activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09261V03 |
| DBxref | InterPro:IPR022657 |
| DBxref | InterPro:IPR022644 |
| DBxref | InterPro:IPR009006 |
| DBxref | InterPro:IPR029066 |
| DBxref | InterPro:IPR022643 |
| DBxref | InterPro:IPR002433 |
| DBxref | InterPro:IPR000183 |
| DBxref | PFAM:PF00278 |
| DBxref | PFAM:PF02784 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An04 | supercontig | An04:625326..626744 - |
|
