You are here

CBS51388_003860-T1, CBS51388_003860-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_003860-T1
Unique NameCBS51388_003860-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An05:375503..375972-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_003860-T1 ID=CBS51388_003860-T1|Name=CBS51388_003860-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=470bp|location=Sequence derived from alignment at An05:375503..375972- (Aspergillus niger CBS 513.88)
ATGAACAATGCGGTCAGTCTCACCAGAAATGCTTGGTCCTGCCCCTAGGA AGGGTTCTTCACCATGACCTTTTCTAACGCACGTGTTAGGCCCAGGAGCT CAACCGAGAGGATTGCAACGATGATGAAAACCAAGACGCTGATGGGGCCT CTCGGCCGGAAGGCCCGGTCCTACTACTTGGAATTTCACGGATGATGGAC ATGGCAGAGCTTCTGAACGCACTACCACCTCGCAGAACTGCAGATCTGCT CGTCGATCGCTGTCTGGATTCTGGGGAACCATCGCTAAGTATGAACTCAG AACTTTACTAGCTTATGTGCAATCTTGAATGGCCTCGTGAAGGATCTAAC AAGTCCTGTAGTTATCATTCATGCTCCGACGTTCAAAAGCGAGGTACATG CCATTGATGAACGAGCCTAAATATAATGATCTAATGCAAGTTTCCTACAG TACCTGAGATTCTGGGATAA
back to top

Coding sequence (CDS) from alignment at An05:375503..375972-

>CBS51388_003860-T1 ID=CBS51388_003860-T1|Name=CBS51388_003860-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1128bp|location=Sequence derived from alignment at An05:375503..375972- (Aspergillus niger CBS 513.88)
TACCTGAGATTCTGGGATAAGATCTAACAAGTCCTGTAGTTATCATTCAT
GCTCCGACGTTCAAAAGCGAGGCCCAGGAGCTCAACCGAGAGGATTGCAA
CGATGATGAAAACCAAGACGCTGATGGGGCCTCTCGGCCGGAAGGCCCGG
TCCTACTACTTGGAATTTCACGGATGATGGACATGGCAGAGCTTCTGAAC
GCACTACCACCTCGCAGAACTGCAGATCTGCTCGTCGATCGCTGTCTGGA
TTCTGGGGAACCATCGCTAAATGAACAATGCGTACCTGAGATTCTGGGAT
AAGATCTAACAAGTCCTGTAGTTATCATTCATGCTCCGACGTTCAAAAGC
GAGGCCCAGGAGCTCAACCGAGAGGATTGCAACGATGATGAAAACCAAGA
CGCTGATGGGGCCTCTCGGCCGGAAGGCCCGGTCCTACTACTTGGAATTT
CACGGATGATGGACATGGCAGAGCTTCTGAACGCACTACCACCTCGCAGA
ACTGCAGATCTGCTCGTCGATCGCTGTCTGGATTCTGGGGAACCATCGCT
AAATGAACAATGCGTACCTGAGATTCTGGGATAAGATCTAACAAGTCCTG
TAGTTATCATTCATGCTCCGACGTTCAAAAGCGAGGCCCAGGAGCTCAAC
CGAGAGGATTGCAACGATGATGAAAACCAAGACGCTGATGGGGCCTCTCG
GCCGGAAGGCCCGGTCCTACTACTTGGAATTTCACGGATGATGGACATGG
CAGAGCTTCTGAACGCACTACCACCTCGCAGAACTGCAGATCTGCTCGTC
GATCGCTGTCTGGATTCTGGGGAACCATCGCTAAATGAACAATGCGTACC
TGAGATTCTGGGATAAGATCTAACAAGTCCTGTAGTTATCATTCATGCTC
CGACGTTCAAAAGCGAGGCCCAGGAGCTCAACCGAGAGGATTGCAACGAT
GATGAAAACCAAGACGCTGATGGGGCCTCTCGGCCGGAAGGCCCGGTCCT
ACTACTTGGAATTTCACGGATGATGGACATGGCAGAGCTTCTGAACGCAC
TACCACCTCGCAGAACTGCAGATCTGCTCGTCGATCGCTGTCTGGATTCT
GGGGAACCATCGCTAAATGAACAATGCG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_003860CBS51388_003860Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_003860-T1CBS51388_003860-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_003860-T1.cdsCBS51388_003860-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_003860-T1.exon4CBS51388_003860-T1.exon4Aspergillus niger CBS 513.88exon
CBS51388_003860-T1.exon3CBS51388_003860-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_003860-T1.exon2CBS51388_003860-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_003860-T1.exon1CBS51388_003860-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An05supercontigAn05:375503..375972 -