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CBS51388_004013-T1, CBS51388_004013-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_004013-T1
Unique NameCBS51388_004013-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An06:199643..201323+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_004013-T1 ID=CBS51388_004013-T1|Name=CBS51388_004013-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1681bp|location=Sequence derived from alignment at An06:199643..201323+ (Aspergillus niger CBS 513.88)
ATGCCATCCTCGGCTCCGGTGCCCGCAACGGGCTTTCAGGCTCTCATTCT
ATGCGGTCCCGGCGTCTCTCTTAACACCTTCACATCGAACCCGGAGGAGT
ACCCGAAGAGTCTCATTCCTATCGCAAACAGGCCCATGGTGTTCTATCCC
ATCGACTTTTGCAAGCGGTCAGGCATTACAGGTACGTTGTTGGTGACTAA
AACATGTGTCCTTCAACCCTAGACTGGCAGATCACCTGTCCTGGACTAAC
GTCATATCTCGGCCGATACTAGATATCACATTAATCACGCCCCCTTCCTC
TCTCGGTCCCCTTCAAGCTGCTCTCAAGCAAAACCCACATCTCACATCGC
TACCCGCCCCCTCCGTGTCCGTCGTGGCCCCAAAAGACCTCGAAATGACC
ATGGGAACGGCCGAACTGCTCCGTCTTCCGGAGGTTCAAGAATGCATCAA
GACAGACTTCCTTCTTCTTCCATGCGACTTGATATGTGATATCCCAGGTG
AATCTATACTAGAGGCGTGGTTGGTCACTCAGGGCGCTTTGGGGGGTAAT
TCCGATGGCCCGGGTGGGGAGCAAGGGGGACGTCGCGGCGGGCTTGCCGT
ATATTATCAGACACTGGGTCGTGAGGAGAGCGTGAAAGGCGAGGCCACCG
ACTTTGTCGCTGTCGCGCCTCTCGGGCAGGATGAAGCTCCGGTAGTATCA
CACCTCGTTGATGGACCTTCAGCCCTGCGGTTTGGCCTATCAAAACTACT
CATGTCAATGCCTATGGATACTGTGAAGGAGAGGATGGAACAGGAGAAGG
GCTTCCTTGTGCGCCACGCCTTAGTACAGAAGTATGCCCAGGTCAAGATG
TTGACCAGCTACCGGGATGCACATCTTTATGTCTTTCCCTATTGGGTGAA
GGATCTAGCTCGTCACCAGGAGAAGCTCGAATCGGTAAGTGAGGATCTTA
TCGGCTATTGGGCCAAAGCAGGATGGCAAAAGGGTCTAGGGGATAAGCTG
GGAATGAACAAGATCTTCCATGATCAAAGCCAGCACGACAACAAAAGTCA
CGACGGCGATCTGGTGGAGGACGAGATTGATCTCAACAACATAAGTTCTA
CAAAGGTCGGCAGTCCGGCTTCACAAGCTGTGGAACACCCTCAAATTCTC
GCCTATGTACAACAGGGGTCAACACCCTTTGTTCGAAGAGTTGACAGTTC
CGCTATCCTGCTGTCAACATCCCTTCGGCTGGCCAAGCTAGACTCGATCG
AGGAAGTTGGTCGCCAGGCAGCATCGCCTTTTGCGCATAGCCAGAAAGTT
GCCCATCCTGAGGGTGTGGCCCAACGCTGCACAGTTACAAAGAGTGACTG
TTTGCTTGCTGAGAATGTTACCGTGGAACCAACATGTGTCATCAAGGAGA
GTGTCATCGGGCCCAACTGCCATATTTCTAGTGGTGCACGACTCACTCGC
TGCGTGGTAATGGACGGAGCAGTAGTTGAGTCCCGAGCTCAGTTGACAGG
CTGTCTAATTGGCCGACGAGCTAGGATTGGTCGTGAATGCGTCCTCAAGG
ACTGTGAAGTCCAGGATGCCAACGTCGTTCCGGAGGAAACGGATGCTAAG
AATGAGAAGTTCATGGTATTCGAAGGTCTGGATGATGAAGGAGATGAGGG
AATGGACGATATGGATGAGTTCGACGGTTGA
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Coding sequence (CDS) from alignment at An06:199643..201323+

>CBS51388_004013-T1 ID=CBS51388_004013-T1|Name=CBS51388_004013-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3180bp|location=Sequence derived from alignment at An06:199643..201323+ (Aspergillus niger CBS 513.88)
ATGCCATCCTCGGCTCCGGTGCCCGCAACGGGCTTTCAGGCTCTCATTCT
ATGCGGTCCCGGCGTCTCTCTTAACACCTTCACATCGAACCCGGAGGAGT
ACCCGAAGAGTCTCATTCCTATCGCAAACAGGCCCATGGTGTTCTATCCC
ATCGACTTTTGCAAGCGGTCAGGCATTACAGATATCACATTAATCACGCC
CCCTTCCTCTCTCGGTCCCCTTCAAGCTGCTCTCAAGCAAAACCCACATC
TCACATCGCTACCCGCCCCCTCCGTGTCCGTCGTGGCCCCAAAAGACCTC
GAAATGACCATGGGAACGGCCGAACTGCTCCGTCTTCCGGAGGTTCAAGA
ATGCATCAAGACAGACTTCCTTCTTCTTCCATGCGACTTGATATGTGATA
TCCCAGGTGAATCTATACTAGAGGCGTGGTTGGTCACTCAGGGCGCTTTG
GGGGGTAATTCCGATGGCCCGGGTGGGGAGCAAGGGGGACGTCGCGGCGG
GCTTGCCGTATATTATCAGACACTGGGTCGTGAGGAGAGCGTGAAAGGCG
AGGCCACCGACTTTGTCGCTGTCGCGCCTCTCGGGCAGGATGAAGCTCCG
GTAGTATCACACCTCGTTGATGGACCTTCAGCCCTGCGGTTTGGCCTATC
AAAACTACTCATGTCAATGCCTATGGATACTGTGAAGGAGAGGATGGAAC
AGGAGAAGGGCTTCCTTGTGCGCCACGCCTTAGTACAGAAGTATGCCCAG
GTCAAGATGTTGACCAGCTACCGGGATGCACATCTTTATGTCTTTCCCTA
TTGGGTGAAGGATCTAGCTCGTCACCAGGAGAAGCTCGAATCGGTAAGTG
AGGATCTTATCGGCTATTGGGCCAAAGCAGGATGGCAAAAGGGTCTAGGG
GATAAGCTGGGAATGAACAAGATCTTCCATGATCAAAGCCAGCACGACAA
CAAAAGTCACGACGGCGATCTGGTGGAGGACGAGATTGATCTCAACAACA
TAAGTTCTACAAAGGTCGGCAGTCCGGCTTCACAAGCTGTGGAACACCCT
CAAATTCTCGCCTATGTACAACAGGGGTCAACACCCTTTGTTCGAAGAGT
TGACAGTTCCGCTATCCTGCTGTCAACATCCCTTCGGCTGGCCAAGCTAG
ACTCGATCGAGGAAGTTGGTCGCCAGGCAGCATCGCCTTTTGCGCATAGC
CAGAAAGTTGCCCATCCTGAGGGTGTGGCCCAACGCTGCACAGTTACAAA
GAGTGACTGTTTGCTTGCTGAGAATGTTACCGTGGAACCAACATGTGTCA
TCAAGGAGAGTGTCATCGGGCCCAACTGCCATATTTCTAGTGGTGCACGA
CTCACTCGCTGCGTGGTAATGGACGGAGCAGTAGTTGAGTCCCGAGCTCA
GTTGACAGGCTGTCTAATTGGCCGACGAGCTAGGATTGGTCGTGAATGCG
TCCTCAAGGACTGTGAAGTCCAGGATGCCAACGTCGTTCCGGAGGAAACG
GATGCTAAGAATGAGAAGTTCATGGTATTCGAAGGTCTGGATGATGAAGG
AGATGAGGGAATGGACGATATGGATGAGTTCGACGGTTGAATGCCATCCT
CGGCTCCGGTGCCCGCAACGGGCTTTCAGGCTCTCATTCTATGCGGTCCC
GGCGTCTCTCTTAACACCTTCACATCGAACCCGGAGGAGTACCCGAAGAG
TCTCATTCCTATCGCAAACAGGCCCATGGTGTTCTATCCCATCGACTTTT
GCAAGCGGTCAGGCATTACAGATATCACATTAATCACGCCCCCTTCCTCT
CTCGGTCCCCTTCAAGCTGCTCTCAAGCAAAACCCACATCTCACATCGCT
ACCCGCCCCCTCCGTGTCCGTCGTGGCCCCAAAAGACCTCGAAATGACCA
TGGGAACGGCCGAACTGCTCCGTCTTCCGGAGGTTCAAGAATGCATCAAG
ACAGACTTCCTTCTTCTTCCATGCGACTTGATATGTGATATCCCAGGTGA
ATCTATACTAGAGGCGTGGTTGGTCACTCAGGGCGCTTTGGGGGGTAATT
CCGATGGCCCGGGTGGGGAGCAAGGGGGACGTCGCGGCGGGCTTGCCGTA
TATTATCAGACACTGGGTCGTGAGGAGAGCGTGAAAGGCGAGGCCACCGA
CTTTGTCGCTGTCGCGCCTCTCGGGCAGGATGAAGCTCCGGTAGTATCAC
ACCTCGTTGATGGACCTTCAGCCCTGCGGTTTGGCCTATCAAAACTACTC
ATGTCAATGCCTATGGATACTGTGAAGGAGAGGATGGAACAGGAGAAGGG
CTTCCTTGTGCGCCACGCCTTAGTACAGAAGTATGCCCAGGTCAAGATGT
TGACCAGCTACCGGGATGCACATCTTTATGTCTTTCCCTATTGGGTGAAG
GATCTAGCTCGTCACCAGGAGAAGCTCGAATCGGTAAGTGAGGATCTTAT
CGGCTATTGGGCCAAAGCAGGATGGCAAAAGGGTCTAGGGGATAAGCTGG
GAATGAACAAGATCTTCCATGATCAAAGCCAGCACGACAACAAAAGTCAC
GACGGCGATCTGGTGGAGGACGAGATTGATCTCAACAACATAAGTTCTAC
AAAGGTCGGCAGTCCGGCTTCACAAGCTGTGGAACACCCTCAAATTCTCG
CCTATGTACAACAGGGGTCAACACCCTTTGTTCGAAGAGTTGACAGTTCC
GCTATCCTGCTGTCAACATCCCTTCGGCTGGCCAAGCTAGACTCGATCGA
GGAAGTTGGTCGCCAGGCAGCATCGCCTTTTGCGCATAGCCAGAAAGTTG
CCCATCCTGAGGGTGTGGCCCAACGCTGCACAGTTACAAAGAGTGACTGT
TTGCTTGCTGAGAATGTTACCGTGGAACCAACATGTGTCATCAAGGAGAG
TGTCATCGGGCCCAACTGCCATATTTCTAGTGGTGCACGACTCACTCGCT
GCGTGGTAATGGACGGAGCAGTAGTTGAGTCCCGAGCTCAGTTGACAGGC
TGTCTAATTGGCCGACGAGCTAGGATTGGTCGTGAATGCGTCCTCAAGGA
CTGTGAAGTCCAGGATGCCAACGTCGTTCCGGAGGAAACGGATGCTAAGA
ATGAGAAGTTCATGGTATTCGAAGGTCTGGATGATGAAGGAGATGAGGGA
ATGGACGATATGGATGAGTTCGACGGTTGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_004013CBS51388_004013Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004013-T1.exon1CBS51388_004013-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_004013-T1.exon2CBS51388_004013-T1.exon2Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004013-T1.cdsCBS51388_004013-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004013-T1CBS51388_004013-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR011004
DBxrefInterPro:IPR029044
DBxrefInterPro:IPR001451
DBxrefPFAM:PF00132
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An06supercontigAn06:199643..201323 +
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