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CBS51388_004255-T1, CBS51388_004255-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_004255-T1
Unique NameCBS51388_004255-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An07:209438..210742-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_004255-T1 ID=CBS51388_004255-T1|Name=CBS51388_004255-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1305bp|location=Sequence derived from alignment at An07:209438..210742- (Aspergillus niger CBS 513.88)
ATGCGCCACATTCCGGCATGGTTCGTGGCCTGTCTGGCTGCGGCCACCGC
CTCGGCCTCTGCCCCGACTTGCAGCACCGACAGCAAGTGTCCGGAAGAGT
ATCCGTGCTGCTACAGTAAGCACAACATGCCTCGTAATTCGCACATGTTC
TGACATATCATCTTCAAGGCGGACAATGTGGTGTAGGAACCTACTGCCTG
GGAGGTTGCAACCCTCTTGAATCGTACTCGCTCGACAGCTGCACGCCCGA
GCCAATTTGCAAGAATCAGACCTACACGTTTACGAACATGGACAATGCGG
TCCTGTACGACCACTACCTTGGTAACGCCTCCGAATACGATTGGGTGTAC
AGCGGCTACCCCAAGATCAAGAATGAGAGTCTGTGGTTGACGATGCCCAA
CGGCACGACGGGCAGTCTGTACTCCCTCAATCATTACATCTGGTACGGCA
AGATCTCGGCCAAGATCAAGAGCAGCCGGACGCAGGGTGTTGTGACGGGT
TTCATTCTGATGTCGGATGATTTTGATGAGATCGACCTTGAATGGGTTGG
ATACAATCTTTCGAGCGCGCAGACAAACTTTTACTTCCAGGGCGTGGAGA
ACTGTATGTTCCGCAGATCAGTCTTATGCACCTAAACTAACAATTCTAGA
TACCAATGAGGTCAATGCCGCCGTGTCTACCGGCAACACCTTTGACGAAT
GGCATACCTACACGATCGACTGGAAGCCCGATGTGCTGGAGTGGCTCATC
GATGGCACTGTGATGCGCACCCTGACCAAGAACTCTACCTACAACGCCAC
CTCGGGTATCTACCAATACCCGCAGACTCCATCCCGGCTGGAGATGTCTA
TCTGGCCCGGTGGCTCGGAGGCCGAGGGACAGGGTACCATTGAATGGGCC
GGCGGTCTCATCGACTGGGACAGCACGGATATCAAGGAGTACGGCTACTT
CTATGCGCAATACAAGGACATCACGGTCGAGTGCTACCCTGCCCCGTCTG
GCACCATCGACAAAGGTGACACATCCTACGTGTACACGAGCGACAGCGGT
CTCTCGGACACCATTGAACTTTCCGGCAACAGCACCGTGCTTTACAACCT
GCAGGATACTGGCTTGAACATGACGGCTGGCACCAAGATGTCTGATTCTG
CCACGGCCTCGGGATCCAGCTCTGGAGCCAGTAGCACCGGCGGCAGCAGC
AGCAGCAGCAAGAAGGAGAGTGCGGCATCCGGCTATGGTGAGCGCGTGAT
GGAGGGATCGGTGCTTGCGGCCGTTGGTGCCGTTGTTGCACTGGGTCTGT
TTTAG
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Coding sequence (CDS) from alignment at An07:209438..210742-

>CBS51388_004255-T1 ID=CBS51388_004255-T1|Name=CBS51388_004255-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3618bp|location=Sequence derived from alignment at An07:209438..210742- (Aspergillus niger CBS 513.88)
ATACCAATGAGGTCAATGCCGCCGTGTCTACCGGCAACACCTTTGACGAA
TGGCATACCTACACGATCGACTGGAAGCCCGATGTGCTGGAGTGGCTCAT
CGATGGCACTGTGATGCGCACCCTGACCAAGAACTCTACCTACAACGCCA
CCTCGGGTATCTACCAATACCCGCAGACTCCATCCCGGCTGGAGATGTCT
ATCTGGCCCGGTGGCTCGGAGGCCGAGGGACAGGGTACCATTGAATGGGC
CGGCGGTCTCATCGACTGGGACAGCACGGATATCAAGGAGTACGGCTACT
TCTATGCGCAATACAAGGACATCACGGTCGAGTGCTACCCTGCCCCGTCT
GGCACCATCGACAAAGGTGACACATCCTACGTGTACACGAGCGACAGCGG
TCTCTCGGACACCATTGAACTTTCCGGCAACAGCACCGTGCTTTACAACC
TGCAGGATACTGGCTTGAACATGACGGCTGGCACCAAGATGTCTGATTCT
GCCACGGCCTCGGGATCCAGCTCTGGAGCCAGTAGCACCGGCGGCAGCAG
CAGCAGCAGCAAGAAGGAGAGTGCGGCATCCGGCTATGGTGAGCGCGTGA
TGGAGGGATCGGTGCTTGCGGCCGTTGGTGCCGTTGTTGCACTGGGTCTG
TTTTAGGCGGACAATGTGGTGTAGGAACCTACTGCCTGGGAGGTTGCAAC
CCTCTTGAATCGTACTCGCTCGACAGCTGCACGCCCGAGCCAATTTGCAA
GAATCAGACCTACACGTTTACGAACATGGACAATGCGGTCCTGTACGACC
ACTACCTTGGTAACGCCTCCGAATACGATTGGGTGTACAGCGGCTACCCC
AAGATCAAGAATGAGAGTCTGTGGTTGACGATGCCCAACGGCACGACGGG
CAGTCTGTACTCCCTCAATCATTACATCTGGTACGGCAAGATCTCGGCCA
AGATCAAGAGCAGCCGGACGCAGGGTGTTGTGACGGGTTTCATTCTGATG
TCGGATGATTTTGATGAGATCGACCTTGAATGGGTTGGATACAATCTTTC
GAGCGCGCAGACAAACTTTTACTTCCAGGGCGTGGAGAACTATGCGCCAC
ATTCCGGCATGGTTCGTGGCCTGTCTGGCTGCGGCCACCGCCTCGGCCTC
TGCCCCGACTTGCAGCACCGACAGCAAGTGTCCGGAAGAGTATCCGTGCT
GCTACAATACCAATGAGGTCAATGCCGCCGTGTCTACCGGCAACACCTTT
GACGAATGGCATACCTACACGATCGACTGGAAGCCCGATGTGCTGGAGTG
GCTCATCGATGGCACTGTGATGCGCACCCTGACCAAGAACTCTACCTACA
ACGCCACCTCGGGTATCTACCAATACCCGCAGACTCCATCCCGGCTGGAG
ATGTCTATCTGGCCCGGTGGCTCGGAGGCCGAGGGACAGGGTACCATTGA
ATGGGCCGGCGGTCTCATCGACTGGGACAGCACGGATATCAAGGAGTACG
GCTACTTCTATGCGCAATACAAGGACATCACGGTCGAGTGCTACCCTGCC
CCGTCTGGCACCATCGACAAAGGTGACACATCCTACGTGTACACGAGCGA
CAGCGGTCTCTCGGACACCATTGAACTTTCCGGCAACAGCACCGTGCTTT
ACAACCTGCAGGATACTGGCTTGAACATGACGGCTGGCACCAAGATGTCT
GATTCTGCCACGGCCTCGGGATCCAGCTCTGGAGCCAGTAGCACCGGCGG
CAGCAGCAGCAGCAGCAAGAAGGAGAGTGCGGCATCCGGCTATGGTGAGC
GCGTGATGGAGGGATCGGTGCTTGCGGCCGTTGGTGCCGTTGTTGCACTG
GGTCTGTTTTAGGCGGACAATGTGGTGTAGGAACCTACTGCCTGGGAGGT
TGCAACCCTCTTGAATCGTACTCGCTCGACAGCTGCACGCCCGAGCCAAT
TTGCAAGAATCAGACCTACACGTTTACGAACATGGACAATGCGGTCCTGT
ACGACCACTACCTTGGTAACGCCTCCGAATACGATTGGGTGTACAGCGGC
TACCCCAAGATCAAGAATGAGAGTCTGTGGTTGACGATGCCCAACGGCAC
GACGGGCAGTCTGTACTCCCTCAATCATTACATCTGGTACGGCAAGATCT
CGGCCAAGATCAAGAGCAGCCGGACGCAGGGTGTTGTGACGGGTTTCATT
CTGATGTCGGATGATTTTGATGAGATCGACCTTGAATGGGTTGGATACAA
TCTTTCGAGCGCGCAGACAAACTTTTACTTCCAGGGCGTGGAGAACTATG
CGCCACATTCCGGCATGGTTCGTGGCCTGTCTGGCTGCGGCCACCGCCTC
GGCCTCTGCCCCGACTTGCAGCACCGACAGCAAGTGTCCGGAAGAGTATC
CGTGCTGCTACAATACCAATGAGGTCAATGCCGCCGTGTCTACCGGCAAC
ACCTTTGACGAATGGCATACCTACACGATCGACTGGAAGCCCGATGTGCT
GGAGTGGCTCATCGATGGCACTGTGATGCGCACCCTGACCAAGAACTCTA
CCTACAACGCCACCTCGGGTATCTACCAATACCCGCAGACTCCATCCCGG
CTGGAGATGTCTATCTGGCCCGGTGGCTCGGAGGCCGAGGGACAGGGTAC
CATTGAATGGGCCGGCGGTCTCATCGACTGGGACAGCACGGATATCAAGG
AGTACGGCTACTTCTATGCGCAATACAAGGACATCACGGTCGAGTGCTAC
CCTGCCCCGTCTGGCACCATCGACAAAGGTGACACATCCTACGTGTACAC
GAGCGACAGCGGTCTCTCGGACACCATTGAACTTTCCGGCAACAGCACCG
TGCTTTACAACCTGCAGGATACTGGCTTGAACATGACGGCTGGCACCAAG
ATGTCTGATTCTGCCACGGCCTCGGGATCCAGCTCTGGAGCCAGTAGCAC
CGGCGGCAGCAGCAGCAGCAGCAAGAAGGAGAGTGCGGCATCCGGCTATG
GTGAGCGCGTGATGGAGGGATCGGTGCTTGCGGCCGTTGGTGCCGTTGTT
GCACTGGGTCTGTTTTAGGCGGACAATGTGGTGTAGGAACCTACTGCCTG
GGAGGTTGCAACCCTCTTGAATCGTACTCGCTCGACAGCTGCACGCCCGA
GCCAATTTGCAAGAATCAGACCTACACGTTTACGAACATGGACAATGCGG
TCCTGTACGACCACTACCTTGGTAACGCCTCCGAATACGATTGGGTGTAC
AGCGGCTACCCCAAGATCAAGAATGAGAGTCTGTGGTTGACGATGCCCAA
CGGCACGACGGGCAGTCTGTACTCCCTCAATCATTACATCTGGTACGGCA
AGATCTCGGCCAAGATCAAGAGCAGCCGGACGCAGGGTGTTGTGACGGGT
TTCATTCTGATGTCGGATGATTTTGATGAGATCGACCTTGAATGGGTTGG
ATACAATCTTTCGAGCGCGCAGACAAACTTTTACTTCCAGGGCGTGGAGA
ACTATGCGCCACATTCCGGCATGGTTCGTGGCCTGTCTGGCTGCGGCCAC
CGCCTCGGCCTCTGCCCCGACTTGCAGCACCGACAGCAAGTGTCCGGAAG
AGTATCCGTGCTGCTACA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005618cell wall
Vocabulary: Molecular Function
TermDefinition
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0016798hydrolase activity, acting on glycosyl bonds
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
GO:0071555cell wall organization
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_004255CBS51388_004255Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004255-T1CBS51388_004255-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004255-T1.cdsCBS51388_004255-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004255-T1.exon3CBS51388_004255-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_004255-T1.exon2CBS51388_004255-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_004255-T1.exon1CBS51388_004255-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
NoteSECRETED:SignalP(1-19)
NoteCAZy:GH16
DBxrefInterPro:IPR013320
DBxrefInterPro:IPR000757
DBxrefInterPro:IPR017168
DBxrefPFAM:PF00722
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An07supercontigAn07:209438..210742 -
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