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CBS51388_004407-T1, CBS51388_004407-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_004407-T1
Unique NameCBS51388_004407-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An07:675311..676279+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_004407-T1 ID=CBS51388_004407-T1|Name=CBS51388_004407-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=969bp|location=Sequence derived from alignment at An07:675311..676279+ (Aspergillus niger CBS 513.88)
ATGGCTTCCGTACTATCGACTCGCGCGGTCAGGACCGCCTCCTGCTCCGC
ATGCCGCTCCCTCGCTCGTCCCAACTCCATCGCAGCCGGTCTCCTTCCGC
GGCGAGGACTCTCGACGGCCACCGAAGATGCAGCAGTCAACCATGCAGAC
AAGCCCCGGTGGTCGTACACGCCGCCTCGTGCCAAAGCGCCGTTCTCCTT
GAGACTCAACTCCAACCGCCCCGAGTTCCCCGTGAATTCAGATCCCAAGG
TTCTGGACCGGTTCTACATCCTCATGCTCGGAAACGACGGCGACAAGATG
CTCTCGGAGGAAACCAAGTGGCTCGCAGTGACACACAAGAGTTTTGATCA
GGGCCGGAGAGGTTTCAACGACCGTTTGGCCTTCCTGGGTATGTCAAGTG
TTGCTGTGCAATGAATGGTAACAGGATTGGATACTAATGCGGATGGGGTT
GTACACAGGCAAGCGTATTGTTCAGCTGCAGGCTTCGTTGGCTTTGGTCC
AGAGTCCTAGCAACGCTGCTAACTCTGCCACCCCCGATGCGTATGGCCGG
GTCCCCTTCACTCACCCGGCTTTAGATAGCCTGGACAACCTCGACTACAA
CACGAAGAGCTTCCTTACGAGCAAGACGAAGCTGTCGGAACTTGCTCACA
AGTATGACATGCAGAGAGTTGTGAGATGGTGCCCTCGGAAGGTGAGTCTA
CGGTTCCCGTGCATTAAGACGACATTCGGACACCCTGCGCTGCTGGGCTT
TTGATATTGTCTTGTGAGTTGGTCAATTGGATCCCCTGCTAACAGCGGCG
TGTTTACGTGTAGCCCAACAACCTCGAAAGCTCTGGAATGGACCTCGTTC
TCGCCCACACGATGTACGCTGTGATCGGTGCCATCTCCCTGGAGAAGGGC
AATGCTGTTGCGAACAAGGTGGCCCGTGAGCGCATATTAGCACCTCTGGG
ATTCAAGATCGCGGCTTGA
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Coding sequence (CDS) from alignment at An07:675311..676279+

>CBS51388_004407-T1 ID=CBS51388_004407-T1|Name=CBS51388_004407-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2331bp|location=Sequence derived from alignment at An07:675311..676279+ (Aspergillus niger CBS 513.88)
ATGGCTTCCGTACTATCGACTCGCGCGGTCAGGACCGCCTCCTGCTCCGC
ATGCCGCTCCCTCGCTCGTCCCAACTCCATCGCAGCCGGTCTCCTTCCGC
GGCGAGGACTCTCGACGGCCACCGAAGATGCAGCAGTCAACCATGCAGAC
AAGCCCCGGTGGTCGTACACGCCGCCTCGTGCCAAAGCGCCGTTCTCCTT
GAGACTCAACTCCAACCGCCCCGAGTTCCCCGTGAATTCAGATCCCAAGG
TTCTGGACCGGTTCTACATCCTCATGCTCGGAAACGACGGCGACAAGATG
CTCTCGGAGGAAACCAAGTGGCTCGCAGTGACACACAAGAGTTTTGATCA
GGGCCGGAGAGGTTTCAACGACCGTTTGGCCTTCCTGGGCAAGCGTATTG
TTCAGCTGCAGGCTTCGTTGGCTTTGGTCCAGAGTCCTAGCAACGCTGCT
AACTCTGCCACCCCCGATGCGTATGGCCGGGTCCCCTTCACTCACCCGGC
TTTAGATAGCCTGGACAACCTCGACTACAACACGAAGAGCTTCCTTACGA
GCAAGACGAAGCTGTCGGAACTTGCTCACAAGTATGACATGCAGAGAGTT
GTGAGATGGTGCCCTCGGAAGCCCAACAACCTCGAAAGCTCTGGAATGGA
CCTCGTTCTCGCCCACACGATGTACGCTGTGATCGGTGCCATCTCCCTGG
AGAAGGGCAATGCTGTTGCGAACAAGGTGGCCCGTGAGCGCATATTAGCA
CCTCTGGGATTCAAGATCGCGGCTTGAATGGCTTCCGTACTATCGACTCG
CGCGGTCAGGACCGCCTCCTGCTCCGCATGCCGCTCCCTCGCTCGTCCCA
ACTCCATCGCAGCCGGTCTCCTTCCGCGGCGAGGACTCTCGACGGCCACC
GAAGATGCAGCAGTCAACCATGCAGACAAGCCCCGGTGGTCGTACACGCC
GCCTCGTGCCAAAGCGCCGTTCTCCTTGAGACTCAACTCCAACCGCCCCG
AGTTCCCCGTGAATTCAGATCCCAAGGTTCTGGACCGGTTCTACATCCTC
ATGCTCGGAAACGACGGCGACAAGATGCTCTCGGAGGAAACCAAGTGGCT
CGCAGTGACACACAAGAGTTTTGATCAGGGCCGGAGAGGTTTCAACGACC
GTTTGGCCTTCCTGGGCAAGCGTATTGTTCAGCTGCAGGCTTCGTTGGCT
TTGGTCCAGAGTCCTAGCAACGCTGCTAACTCTGCCACCCCCGATGCGTA
TGGCCGGGTCCCCTTCACTCACCCGGCTTTAGATAGCCTGGACAACCTCG
ACTACAACACGAAGAGCTTCCTTACGAGCAAGACGAAGCTGTCGGAACTT
GCTCACAAGTATGACATGCAGAGAGTTGTGAGATGGTGCCCTCGGAAGCC
CAACAACCTCGAAAGCTCTGGAATGGACCTCGTTCTCGCCCACACGATGT
ACGCTGTGATCGGTGCCATCTCCCTGGAGAAGGGCAATGCTGTTGCGAAC
AAGGTGGCCCGTGAGCGCATATTAGCACCTCTGGGATTCAAGATCGCGGC
TTGAATGGCTTCCGTACTATCGACTCGCGCGGTCAGGACCGCCTCCTGCT
CCGCATGCCGCTCCCTCGCTCGTCCCAACTCCATCGCAGCCGGTCTCCTT
CCGCGGCGAGGACTCTCGACGGCCACCGAAGATGCAGCAGTCAACCATGC
AGACAAGCCCCGGTGGTCGTACACGCCGCCTCGTGCCAAAGCGCCGTTCT
CCTTGAGACTCAACTCCAACCGCCCCGAGTTCCCCGTGAATTCAGATCCC
AAGGTTCTGGACCGGTTCTACATCCTCATGCTCGGAAACGACGGCGACAA
GATGCTCTCGGAGGAAACCAAGTGGCTCGCAGTGACACACAAGAGTTTTG
ATCAGGGCCGGAGAGGTTTCAACGACCGTTTGGCCTTCCTGGGCAAGCGT
ATTGTTCAGCTGCAGGCTTCGTTGGCTTTGGTCCAGAGTCCTAGCAACGC
TGCTAACTCTGCCACCCCCGATGCGTATGGCCGGGTCCCCTTCACTCACC
CGGCTTTAGATAGCCTGGACAACCTCGACTACAACACGAAGAGCTTCCTT
ACGAGCAAGACGAAGCTGTCGGAACTTGCTCACAAGTATGACATGCAGAG
AGTTGTGAGATGGTGCCCTCGGAAGCCCAACAACCTCGAAAGCTCTGGAA
TGGACCTCGTTCTCGCCCACACGATGTACGCTGTGATCGGTGCCATCTCC
CTGGAGAAGGGCAATGCTGTTGCGAACAAGGTGGCCCGTGAGCGCATATT
AGCACCTCTGGGATTCAAGATCGCGGCTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006396RNA processing
Vocabulary: Molecular Function
TermDefinition
GO:0004525ribonuclease III activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_004407CBS51388_004407Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004407-T1.exon1CBS51388_004407-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_004407-T1.exon2CBS51388_004407-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_004407-T1.exon3CBS51388_004407-T1.exon3Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004407-T1.cdsCBS51388_004407-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004407-T1CBS51388_004407-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036389
DBxrefInterPro:IPR000999
DBxrefPFAM:PF14622
DBxrefPFAM:PF00636
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An07supercontigAn07:675311..676279 +
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