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CBS51388_004409-T1, CBS51388_004409-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_004409-T1
Unique NameCBS51388_004409-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An07:680391..681464-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_004409-T1 ID=CBS51388_004409-T1|Name=CBS51388_004409-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1074bp|location=Sequence derived from alignment at An07:680391..681464- (Aspergillus niger CBS 513.88)
ATGGATATGCGCAAGAAGAAGAGAAAGGTCCTCTTGATGGGCAAAAGTGG
ATCGGGAAAATCGTCCATGCGCTCAATTATCTTCAGCAATTATGTTGCGA
AAGATGTCCGACGCCTGGGTGCTACCATTGATGTCGAGCACAGCCATGTC
AAGTTCATGGGGAACCTCACGCTGAACCTCTGGGATTGCGGAGGGTAAGT
CGCAGTCTCAGGCATTTCTCGAAACATTCCAGTGTCTAACCCAATGTGCT
CTTTTACCATAAACAGACAGGATGCATTCATGGAAACATATCTCGCGTCT
CAGCGAGGGAACATCTTCTCCGACGTCGCGGTCCTGATCTACGTCTTCGA
CATTGAATCCCGCGAGGTCGAGCGCGATCTTGACACCTACAACGCTATCA
TCAACGCCCTGAAAGAATACAGTCCCAATGCCTACGTATTCTGTCTTGTG
CATAAGCTGGATCTCATCCAGGCCGAGCACCGCCAACGCATTTACGAGGA
ACGGTCGGCCTTGATCCGCAGTCGTTCGGAGCATTTCAGTATCGACACCT
TTGGCAGTAGTATCTGGGATCAATCGCTCTACAAAGCGTGGGCCGGCATC
GTCCACAAACTCATTCCAAATCTGACTGTCATTGAGCGCTTCCTGCAAGC
CTTCGCCAAGCGAATTGATGCCGAGGAAGTCATTCTGTTCGAACGGTCGA
CCTTCCTCACCGTTACTTCCGTTTCCTCAGAAGTAGGCGACATGAACCCC
ATCTACGATCGCCATGAACGTCTCTCCAACATCATGAAAGCCTTCAAGCA
CTGTGCGGCCCGAAACACTCATACAACCCCTGCATCTGCCGGTTTCGTTG
TCATGCACACCAAGACTCCGCAGTTCAATGTCTTCCTCGGCCGTTTCACA
GACAACACATACATTTTTCTGGTTGTGCCGCCTGGCGAAGCAGCCTACAA
CTGCGCCGTTCTCAACACCATGCTAGCTCGCGAGGGCTTCTCCAAAGCCG
CCGCAACCGGTCACGGGGACGGGTTTCCCCTCCCTGCGGCTGAATCCCCG
GACAACAGCAACGGGACCCATTGA
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Coding sequence (CDS) from alignment at An07:680391..681464-

>CBS51388_004409-T1 ID=CBS51388_004409-T1|Name=CBS51388_004409-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2004bp|location=Sequence derived from alignment at An07:680391..681464- (Aspergillus niger CBS 513.88)
ACAGGATGCATTCATGGAAACATATCTCGCGTCTCAGCGAGGGAACATCT
TCTCCGACGTCGCGGTCCTGATCTACGTCTTCGACATTGAATCCCGCGAG
GTCGAGCGCGATCTTGACACCTACAACGCTATCATCAACGCCCTGAAAGA
ATACAGTCCCAATGCCTACGTATTCTGTCTTGTGCATAAGCTGGATCTCA
TCCAGGCCGAGCACCGCCAACGCATTTACGAGGAACGGTCGGCCTTGATC
CGCAGTCGTTCGGAGCATTTCAGTATCGACACCTTTGGCAGTAGTATCTG
GGATCAATCGCTCTACAAAGCGTGGGCCGGCATCGTCCACAAACTCATTC
CAAATCTGACTGTCATTGAGCGCTTCCTGCAAGCCTTCGCCAAGCGAATT
GATGCCGAGGAAGTCATTCTGTTCGAACGGTCGACCTTCCTCACCGTTAC
TTCCGTTTCCTCAGAAGTAGGCGACATGAACCCCATCTACGATCGCCATG
AACGTCTCTCCAACATCATGAAAGCCTTCAAGCACTGTGCGGCCCGAAAC
ACTCATACAACCCCTGCATCTGCCGGTTTCGTTGTCATGCACACCAAGAC
TCCGCAGTTCAATGTCTTCCTCGGCCGTTTCACAGACAACACATACATTT
TTCTGGTTGTGCCGCCTGGCGAAGCAGCCTACAACTGCGCCGTTCTCAAC
ACCATGCTAGCTCGCGAGGGCTTCTCCAAAGCCGCCGCAACCGGTCACGG
GGACGGGTTTCCCCTCCCTGCGGCTGAATCCCCGGACAACAGCAACGGGA
CCCATTGAATGGATATGCGCAAGAAGAAGAGAAAGGTCCTCTTGATGGGC
AAAAGTGGATCGGGAAAATCGTCCATGCGCTCAATTATCTTCAGCAATTA
TGTTGCGAAAGATGTCCGACGCCTGGGTGCTACCATTGATGTCGAGCACA
GCCATGTCAAGTTCATGGGGAACCTCACGCTGAACCTCTGGGATTGCGGA
GGACAGGATGCATTCATGGAAACATATCTCGCGTCTCAGCGAGGGAACAT
CTTCTCCGACGTCGCGGTCCTGATCTACGTCTTCGACATTGAATCCCGCG
AGGTCGAGCGCGATCTTGACACCTACAACGCTATCATCAACGCCCTGAAA
GAATACAGTCCCAATGCCTACGTATTCTGTCTTGTGCATAAGCTGGATCT
CATCCAGGCCGAGCACCGCCAACGCATTTACGAGGAACGGTCGGCCTTGA
TCCGCAGTCGTTCGGAGCATTTCAGTATCGACACCTTTGGCAGTAGTATC
TGGGATCAATCGCTCTACAAAGCGTGGGCCGGCATCGTCCACAAACTCAT
TCCAAATCTGACTGTCATTGAGCGCTTCCTGCAAGCCTTCGCCAAGCGAA
TTGATGCCGAGGAAGTCATTCTGTTCGAACGGTCGACCTTCCTCACCGTT
ACTTCCGTTTCCTCAGAAGTAGGCGACATGAACCCCATCTACGATCGCCA
TGAACGTCTCTCCAACATCATGAAAGCCTTCAAGCACTGTGCGGCCCGAA
ACACTCATACAACCCCTGCATCTGCCGGTTTCGTTGTCATGCACACCAAG
ACTCCGCAGTTCAATGTCTTCCTCGGCCGTTTCACAGACAACACATACAT
TTTTCTGGTTGTGCCGCCTGGCGAAGCAGCCTACAACTGCGCCGTTCTCA
ACACCATGCTAGCTCGCGAGGGCTTCTCCAAAGCCGCCGCAACCGGTCAC
GGGGACGGGTTTCCCCTCCCTGCGGCTGAATCCCCGGACAACAGCAACGG
GACCCATTGAATGGATATGCGCAAGAAGAAGAGAAAGGTCCTCTTGATGG
GCAAAAGTGGATCGGGAAAATCGTCCATGCGCTCAATTATCTTCAGCAAT
TATGTTGCGAAAGATGTCCGACGCCTGGGTGCTACCATTGATGTCGAGCA
CAGCCATGTCAAGTTCATGGGGAACCTCACGCTGAACCTCTGGGATTGCG
GAGG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_004409CBS51388_004409Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004409-T1CBS51388_004409-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004409-T1.cdsCBS51388_004409-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004409-T1.exon2CBS51388_004409-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_004409-T1.exon1CBS51388_004409-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
NoteBUSCO:EOG09264IV9
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR039397
DBxrefInterPro:IPR006762
DBxrefPFAM:PF08477
DBxrefPFAM:PF00071
DBxrefPFAM:PF01926
DBxrefPFAM:PF04670
DBxrefPFAM:PF00025
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An07supercontigAn07:680391..681464 -
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