You are here

Home

CBS51388_004551-T1, CBS51388_004551-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_004551-T1
Unique NameCBS51388_004551-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An07:1142427..1144877-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_004551-T1 ID=CBS51388_004551-T1|Name=CBS51388_004551-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2451bp|location=Sequence derived from alignment at An07:1142427..1144877- (Aspergillus niger CBS 513.88)
ATGGCTGCAAAAAGAGTCTCGGACAACGGTCCGAAAGATGCCTCCAACTT
ACCACCACGATCTCTAAGGAAGCGAAGAGATAAAGGAGAAGACAAGTCTC
CTAGCAAAATATCCAAGACGAGTCCCCCGGCTCCAACCAGAACAGTGCGA
TCCCGGGCGAAGCAGAGGCAAGAAGAAGAAGACACAATTTGTTCTCCTAG
CAAACGGCCCAACAAGAGTTCCCCCATCCCATCCCAGCCATCACGAACCC
AGAAGAAGCGGGGGCAAGAAGGAGGAGATGCAGACAGCTACCCTAGCAAA
AAATCCAAGACGAGTTCCCCAGCTTCGTCCCAAACATCGCAATCCCTGGA
GGAGCGGAGACAAGAAGAAGAAGAACAAGAACAAGAAGAAGAAGCCGACA
GCTCTCCTAGCAAACGGCCCGGTACAACTCCTCCCAATCTATCCCAACCC
CTACAATTAGGGGAGGAGCGGAGGGAGGAAGGGGAAGACAATGCAGACAG
CTCTCCTGGCGAACGACCCAAGACGAGTTCTCCCGCTCCAGCCCGGCCGT
CAGGATCCCAGAGGAAGCGGGGACAAGAAGGAGAAGGTGCAGAGAATACT
CCTAACAAACGACCCAAGACGGGCACCTTTCAGCCCCTCTCAATATACAC
GGAATTTATACAGGATAGAGACCAGATTCTGCATGCGATCATGTACGACT
TATATGATGTCAACAAAATATACAACGACCGTCAAAAAAACAAGGTGGCA
AGGTTGGACTACGAAGCGCGGTGTATCTACGCATCACGGGCCTTAGAGAA
GGCCATTACTTGCAGATCATGGTCATGGGATGAGGCCAATATGGATTGCG
AGGAGCGGGAAGCGAGCCGACTACGATTCTTCGCTGAAAAAATCGGCTGG
CCCATGCTTGCGATATGTGTGCAAGCGGAAGCCTTTCGAAGGCTTTGTCA
AGAAGAAAGCACACCAATGTGGCAATCTGTATGGAGAAGACTGCAAGGGT
ACGTGTATAATATCTGGATTCAGGCTCACTCGCGCGGTTTTGAGTGGCGC
AGTTTGTTGGAGCCATACGCGGGGGTTGATGCTCCGCGCGGGTTCAACCA
GGCATTGGCTCACAGAAGTGGAGTGGATGGGCTCAGATATACGCATCCTC
ACGAAATTGTCGTAGATGAAGGGGTCAAAACAGTTCGCCCACCGATATTC
CGAGATCGTTTACAGAAACATGTTGAATTTAGCACCTTTGACCCCAAGGA
TTGGGAAACGGCGACGGATCCAGAGCATCGAGGCCTGAAAAAGGATCCGA
CGCTGCGAAAGGACCTTAACCATGGCCTTTGCGATCTTTGCGCCGCAGGG
AAAATTTGCGAATGTCAAATTAAGAAGGCGCCCTTTGAGTTCGTGCAGCT
GGTGCAAACCACTATGGGCGTCGGGGTACGTGCTCTTGCGCAATTTGAGA
AAGGAGATATCCTGGCCGAATTTGTTGGCCCACTCCATCCACCTTGCTAT
ATAGGTGACCCTGTTTATGCGCTTACAATGCAGGGCAAAGTCAGAGTAAA
GGAGGAGATTGCTCTGATTTGCCCAATGGAATTTGGGAACTTCACTCGGT
TTATTAACCACTCGTGCAGGGCTAATACAACTTTTGAGCGCCGGACAATT
GGGGACCGGGCAATGATGACCGTTGAGGCCTTGCGGGATATCCAACCTTT
CGAGGAACTCACAGTCAACTATGGCCGGGCTTATTGGAAAGGGCGGACTT
GCGAGTGTGGAGAGGAAGGGTGTTACACTAAGCAAGAGGAGAGGAAAAAA
CAGCAACGAGAACGAGAAATGGAAAGGCGAAAGCAAAGGGACATGCAACT
CGAAGCATCCAAGAATGTTGCAACGGAAGAGGATGGAGATACAGAAGAAT
ATTCAGACGAGGAAGATGAAGAAGAAGATACAGATGAAGAAGAAGATACA
GATGAAGAAGAAGATACAGATGAAGAAGAGACAGATGAAGAAGGAGAGGT
CGAAGAAGGGCCACCGAAGAAGAAACCCGAAGAAGAGAAAGCCCCATCAA
AGAAGGGATCAAAAGAAGGATCATCTCTAGGAGCAGCAGAAGGGCCATCA
AAGGGAAAGCCCAAAGGAAAGAAAGCATTAGCAAAAGACGGGCCAGGAAA
AGAAAGGGCAGAGGAAGAGAGAGCAGCACGAGTAATAAATCAAGAGTGGG
ATCCTATTCTCGAAGACTATACTGATAACTCTGGTTGTGAAGGTGAAGAA
GTAGAAAGGGCAAGAGGAAAAGCAAAAGAAAAAGAGAAAGAAAAAGGAAA
AGGAAAGAGGAAAGAAAAGGAGAAAGAAAAAGACGCAGAAGAACAAGAAG
AATCGACGGAAGAATCATCATCATCATCAGAAGAGTCAGATGAATCTTCT
TACGTGTTGGTCGAGGAGGAGGAAGAAGAAGATAGAGGTAAAGAAGACTA
A
back to top

Coding sequence (CDS) from alignment at An07:1142427..1144877-

>CBS51388_004551-T1 ID=CBS51388_004551-T1|Name=CBS51388_004551-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2451bp|location=Sequence derived from alignment at An07:1142427..1144877- (Aspergillus niger CBS 513.88)
ATGGCTGCAAAAAGAGTCTCGGACAACGGTCCGAAAGATGCCTCCAACTT
ACCACCACGATCTCTAAGGAAGCGAAGAGATAAAGGAGAAGACAAGTCTC
CTAGCAAAATATCCAAGACGAGTCCCCCGGCTCCAACCAGAACAGTGCGA
TCCCGGGCGAAGCAGAGGCAAGAAGAAGAAGACACAATTTGTTCTCCTAG
CAAACGGCCCAACAAGAGTTCCCCCATCCCATCCCAGCCATCACGAACCC
AGAAGAAGCGGGGGCAAGAAGGAGGAGATGCAGACAGCTACCCTAGCAAA
AAATCCAAGACGAGTTCCCCAGCTTCGTCCCAAACATCGCAATCCCTGGA
GGAGCGGAGACAAGAAGAAGAAGAACAAGAACAAGAAGAAGAAGCCGACA
GCTCTCCTAGCAAACGGCCCGGTACAACTCCTCCCAATCTATCCCAACCC
CTACAATTAGGGGAGGAGCGGAGGGAGGAAGGGGAAGACAATGCAGACAG
CTCTCCTGGCGAACGACCCAAGACGAGTTCTCCCGCTCCAGCCCGGCCGT
CAGGATCCCAGAGGAAGCGGGGACAAGAAGGAGAAGGTGCAGAGAATACT
CCTAACAAACGACCCAAGACGGGCACCTTTCAGCCCCTCTCAATATACAC
GGAATTTATACAGGATAGAGACCAGATTCTGCATGCGATCATGTACGACT
TATATGATGTCAACAAAATATACAACGACCGTCAAAAAAACAAGGTGGCA
AGGTTGGACTACGAAGCGCGGTGTATCTACGCATCACGGGCCTTAGAGAA
GGCCATTACTTGCAGATCATGGTCATGGGATGAGGCCAATATGGATTGCG
AGGAGCGGGAAGCGAGCCGACTACGATTCTTCGCTGAAAAAATCGGCTGG
CCCATGCTTGCGATATGTGTGCAAGCGGAAGCCTTTCGAAGGCTTTGTCA
AGAAGAAAGCACACCAATGTGGCAATCTGTATGGAGAAGACTGCAAGGGT
ACGTGTATAATATCTGGATTCAGGCTCACTCGCGCGGTTTTGAGTGGCGC
AGTTTGTTGGAGCCATACGCGGGGGTTGATGCTCCGCGCGGGTTCAACCA
GGCATTGGCTCACAGAAGTGGAGTGGATGGGCTCAGATATACGCATCCTC
ACGAAATTGTCGTAGATGAAGGGGTCAAAACAGTTCGCCCACCGATATTC
CGAGATCGTTTACAGAAACATGTTGAATTTAGCACCTTTGACCCCAAGGA
TTGGGAAACGGCGACGGATCCAGAGCATCGAGGCCTGAAAAAGGATCCGA
CGCTGCGAAAGGACCTTAACCATGGCCTTTGCGATCTTTGCGCCGCAGGG
AAAATTTGCGAATGTCAAATTAAGAAGGCGCCCTTTGAGTTCGTGCAGCT
GGTGCAAACCACTATGGGCGTCGGGGTACGTGCTCTTGCGCAATTTGAGA
AAGGAGATATCCTGGCCGAATTTGTTGGCCCACTCCATCCACCTTGCTAT
ATAGGTGACCCTGTTTATGCGCTTACAATGCAGGGCAAAGTCAGAGTAAA
GGAGGAGATTGCTCTGATTTGCCCAATGGAATTTGGGAACTTCACTCGGT
TTATTAACCACTCGTGCAGGGCTAATACAACTTTTGAGCGCCGGACAATT
GGGGACCGGGCAATGATGACCGTTGAGGCCTTGCGGGATATCCAACCTTT
CGAGGAACTCACAGTCAACTATGGCCGGGCTTATTGGAAAGGGCGGACTT
GCGAGTGTGGAGAGGAAGGGTGTTACACTAAGCAAGAGGAGAGGAAAAAA
CAGCAACGAGAACGAGAAATGGAAAGGCGAAAGCAAAGGGACATGCAACT
CGAAGCATCCAAGAATGTTGCAACGGAAGAGGATGGAGATACAGAAGAAT
ATTCAGACGAGGAAGATGAAGAAGAAGATACAGATGAAGAAGAAGATACA
GATGAAGAAGAAGATACAGATGAAGAAGAGACAGATGAAGAAGGAGAGGT
CGAAGAAGGGCCACCGAAGAAGAAACCCGAAGAAGAGAAAGCCCCATCAA
AGAAGGGATCAAAAGAAGGATCATCTCTAGGAGCAGCAGAAGGGCCATCA
AAGGGAAAGCCCAAAGGAAAGAAAGCATTAGCAAAAGACGGGCCAGGAAA
AGAAAGGGCAGAGGAAGAGAGAGCAGCACGAGTAATAAATCAAGAGTGGG
ATCCTATTCTCGAAGACTATACTGATAACTCTGGTTGTGAAGGTGAAGAA
GTAGAAAGGGCAAGAGGAAAAGCAAAAGAAAAAGAGAAAGAAAAAGGAAA
AGGAAAGAGGAAAGAAAAGGAGAAAGAAAAAGACGCAGAAGAACAAGAAG
AATCGACGGAAGAATCATCATCATCATCAGAAGAGTCAGATGAATCTTCT
TACGTGTTGGTCGAGGAGGAGGAAGAAGAAGATAGAGGTAAAGAAGACTA
A
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_004551CBS51388_004551Aspergillus niger CBS 513.88gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004551-T1.cdsCBS51388_004551-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004551-T1.exon1CBS51388_004551-T1.exon1Aspergillus niger CBS 513.88exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_004551-T1CBS51388_004551-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR001214
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An07supercontigAn07:1142427..1144877 -
Powered by Drupal