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Sequences
The following sequences are available for this feature:
mRNA from alignment at An07:2154021..2154984- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_004871-T1 ID=CBS51388_004871-T1|Name=CBS51388_004871-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=964bp|location=Sequence derived from alignment at An07:2154021..2154984- (Aspergillus niger CBS 513.88)
ATGGCCGTTCCTGACGCAGACGTTCACCCCGAAGCTACCGGTGCAGCCAA
AGCGCTGGTTGACCGACACCAAGCTGAGCAACCATTAAAGCTGTATGCCG
GCTGGTTCTGTCCGTGAGTTACAACCCCCTCCCCCCCTTCAAAGTGCACT
TTTTGGAATCTTCTACTAATGCCTCCGCAGCTTCGGTATACTTCCCACCC
CTCATATCTTCTCACTACTCCATTCATAATCGACTAATCAATCTCCAGTC
CAACGTGTCTGGCTTGTTCTCGAAGAGAAACAAATTCCCTACCAGTACAT
CGAAATAAACCCCTACCACAAAGAACCCTCCTTCCTCGCTCTGAACCCAC
GAGGCCTCGTCCCCACTATCTCCGTCCCCGACCCCTCAACCAACACCTCC
AAGCCTCTCTACGAATCCACCGTCATCCTCGAATACCTCGAAGAAGCATA
CCCAAACCACCGACCTCTCCTCCCTTCTGACCCGTACCAGCGCGCCCGTT
CCCGCATCTGGATCGACTACGTCACCTCGCGCATTATCCCCACCCTGCAC
CGCTTCCTCCAGTACCAGCCCTCGACGCGCGGAATTGAGGGCCTGCACCA
AGCCCGTCAGGAGTTCCTCTCCACCTTGAAGGAATGGGCTAAGGAGATCG
ACTCCTCGGGGCCGTATTTCTGGGGCTCGGAGGTGTCGCTTCCGGATTTG
GTGCTCGCGCCGTGGGCGTTCCGACTTTGGGTGTTTGATGAGTTTAAGGG
TGGATTAGGGATCCCGAAGCCCGGAGAGGGGGGGGAGGATGAGGAGGTTT
GGGGCAAATGGAGAAAGTGGCAGGAGGCTGTTGAGGGACGGCGGAGCGCG
AAGGAGACGACGAGTGAGGCGGAGCATTATCTGCCCATCTATAAGAGGTA
TGCGGATGATAAGGCGCAGAGTTGGTTGGCAAGAGCAACGAGAGAGGGTA
AGGGGGTCCCATGA back to topCoding sequence (CDS) from alignment at An07:2154021..2154984- >CBS51388_004871-T1 ID=CBS51388_004871-T1|Name=CBS51388_004871-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1650bp|location=Sequence derived from alignment at An07:2154021..2154984- (Aspergillus niger CBS 513.88)
TCCAACGTGTCTGGCTTGTTCTCGAAGAGAAACAAATTCCCTACCAGTAC
ATCGAAATAAACCCCTACCACAAAGAACCCTCCTTCCTCGCTCTGAACCC
ACGAGGCCTCGTCCCCACTATCTCCGTCCCCGACCCCTCAACCAACACCT
CCAAGCCTCTCTACGAATCCACCGTCATCCTCGAATACCTCGAAGAAGCA
TACCCAAACCACCGACCTCTCCTCCCTTCTGACCCGTACCAGCGCGCCCG
TTCCCGCATCTGGATCGACTACGTCACCTCGCGCATTATCCCCACCCTGC
ACCGCTTCCTCCAGTACCAGCCCTCGACGCGCGGAATTGAGGGCCTGCAC
CAAGCCCGTCAGGAGTTCCTCTCCACCTTGAAGGAATGGGCTAAGGAGAT
CGACTCCTCGGGGCCGTATTTCTGGGGCTCGGAGGTGTCGCTTCCGGATT
TGGTGCTCGCGCCGTGGGCGTTCCGACTTTGGGTGTTTGATGAGTTTAAG
GGTGGATTAGGGATCCCGAAGCCCGGAGAGGGGGGGGAGGATGAGGAGGT
TTGGGGCAAATGGAGAAAGTGGCAGGAGGCTGTTGAGGGACGGCGGAGCG
CGAAGGAGACGACGAGTGAGGCGGAGCATTATCTGCCCATCTATAAGAGG
TATGCGGATGATAAGGCGCAGAGTTGGTTGGCAAGAGCAACGAGAGAGGG
TAAGGGGGTCCCATGAATGGCCGTTCCTGACGCAGACGTTCACCCCGAAG
CTACCGGTGCAGCCAAAGCGCTGGTTGACCGACACCAAGCTGAGCAACCA
TTAAAGCTGTATGCCGGCTGGTTCTTCCAACGTGTCTGGCTTGTTCTCGA
AGAGAAACAAATTCCCTACCAGTACATCGAAATAAACCCCTACCACAAAG
AACCCTCCTTCCTCGCTCTGAACCCACGAGGCCTCGTCCCCACTATCTCC
GTCCCCGACCCCTCAACCAACACCTCCAAGCCTCTCTACGAATCCACCGT
CATCCTCGAATACCTCGAAGAAGCATACCCAAACCACCGACCTCTCCTCC
CTTCTGACCCGTACCAGCGCGCCCGTTCCCGCATCTGGATCGACTACGTC
ACCTCGCGCATTATCCCCACCCTGCACCGCTTCCTCCAGTACCAGCCCTC
GACGCGCGGAATTGAGGGCCTGCACCAAGCCCGTCAGGAGTTCCTCTCCA
CCTTGAAGGAATGGGCTAAGGAGATCGACTCCTCGGGGCCGTATTTCTGG
GGCTCGGAGGTGTCGCTTCCGGATTTGGTGCTCGCGCCGTGGGCGTTCCG
ACTTTGGGTGTTTGATGAGTTTAAGGGTGGATTAGGGATCCCGAAGCCCG
GAGAGGGGGGGGAGGATGAGGAGGTTTGGGGCAAATGGAGAAAGTGGCAG
GAGGCTGTTGAGGGACGGCGGAGCGCGAAGGAGACGACGAGTGAGGCGGA
GCATTATCTGCCCATCTATAAGAGGTATGCGGATGATAAGGCGCAGAGTT
GGTTGGCAAGAGCAACGAGAGAGGGTAAGGGGGTCCCATGAATGGCCGTT
CCTGACGCAGACGTTCACCCCGAAGCTACCGGTGCAGCCAAAGCGCTGGT
TGACCGACACCAAGCTGAGCAACCATTAAAGCTGTATGCCGGCTGGTTCT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036282 |
| DBxref | InterPro:IPR010987 |
| DBxref | InterPro:IPR040079 |
| DBxref | InterPro:IPR036249 |
| DBxref | InterPro:IPR004045 |
| DBxref | PFAM:PF13417 |
| DBxref | PFAM:PF13409 |
| DBxref | PFAM:PF02798 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An07 | supercontig | An07:2154021..2154984 - |
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