|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at An08:221698..222858+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_005023-T1 ID=CBS51388_005023-T1|Name=CBS51388_005023-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1161bp|location=Sequence derived from alignment at An08:221698..222858+ (Aspergillus niger CBS 513.88)
ATGTACAGTCTCCTAGGGCTCCTCGCTGCGCTGGGCTGCGCGCAGTCCGC
CCTCGCAGCCCCCCTAGCCAGCCCCCCAAACTCTTCCTACATCGACTGGC
GCACCTTCAAAGGCAACGGCGTCAACCTCGGCGGCTGGCTCGAGCAAGAA
TCGACAATAGACAGTCTATTCTGGGATAAATATTCTGGCGGCGCCTCAGA
CGAATGGGGCCTCTGCGAACATCTAGGCTCACAATGCGGCCCCGTCCTCG
AGCACCGCTACGCAACCTGGATCACCAAGGCCGACATTGACAAGCTCGCC
TCCGGCGGTATCACAGTCCTGCGCATCCCCACCACCTATGCCGCATGGAT
CGATCTCCCCAGCTCGCAGCTCTACTCGGGAAACCAAACGGCCTACCTCA
AAGAAATCGCCGACTACGCCATCAAGACTTACAACATGCACATCATCATC
GACACGCACTCCCTCCCCGGCGGCGTCAACGGCCTGACCATCGGCGAAGC
CACCGGCCACTGGTACTGGTTCTACAACGAGACCAACTTCAACTACTCCA
TGCAAGTGATCGATCAAGTCATCAACTTCATCCAAACCTCGGGATCCCCG
CAATCCTACACCCTCGAGCCCATCAACGAACCCGCCGACAACAACACCAA
CATGGTCGTCTTCGGCACGCCCCTCGCCCTGACGGACCACGGCGCCGCCT
GGGTCCTCAAGTACATCCGGGCTGTGGTTCAACGGGTCGAATCGGTGAAC
CCCAACATCCCCGTCATGTTCCAGGGTAGTTTCAAGTACCCGCAGTACTG
GGAAGGTGACTTCCCCGCGAGTACGAACCTCGTCTTCGACACGCATCATT
ATTACTACGAGCATATGGATTCCTCGTCGGAGAATCTGCCCGAGTATATT
CTTGCGGATGCGCGGGAGAAGTCGGGCACGGGCAAGTTCCCCGTGTTTGT
GGGCGAATGGGCAATCCAGGCGACGTATAATAATACGTTGGCGTTGAGGA
AGAGGAATGTGTTGGCGGGGTTGAAGACTTGGAGCAGTTTTTCGCAGGGG
AGTTCGTATTGGACGGCGAAGTTTACGGGGAATACGAGTGTCGCTGGACA
GGGGGAGCAGAAGGATTATTGGTGTTATGAGACGTTTATTGACGAGGGGT
ATTTCAATTGA back to topCoding sequence (CDS) from alignment at An08:221698..222858+ >CBS51388_005023-T1 ID=CBS51388_005023-T1|Name=CBS51388_005023-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1161bp|location=Sequence derived from alignment at An08:221698..222858+ (Aspergillus niger CBS 513.88)
ATGTACAGTCTCCTAGGGCTCCTCGCTGCGCTGGGCTGCGCGCAGTCCGC
CCTCGCAGCCCCCCTAGCCAGCCCCCCAAACTCTTCCTACATCGACTGGC
GCACCTTCAAAGGCAACGGCGTCAACCTCGGCGGCTGGCTCGAGCAAGAA
TCGACAATAGACAGTCTATTCTGGGATAAATATTCTGGCGGCGCCTCAGA
CGAATGGGGCCTCTGCGAACATCTAGGCTCACAATGCGGCCCCGTCCTCG
AGCACCGCTACGCAACCTGGATCACCAAGGCCGACATTGACAAGCTCGCC
TCCGGCGGTATCACAGTCCTGCGCATCCCCACCACCTATGCCGCATGGAT
CGATCTCCCCAGCTCGCAGCTCTACTCGGGAAACCAAACGGCCTACCTCA
AAGAAATCGCCGACTACGCCATCAAGACTTACAACATGCACATCATCATC
GACACGCACTCCCTCCCCGGCGGCGTCAACGGCCTGACCATCGGCGAAGC
CACCGGCCACTGGTACTGGTTCTACAACGAGACCAACTTCAACTACTCCA
TGCAAGTGATCGATCAAGTCATCAACTTCATCCAAACCTCGGGATCCCCG
CAATCCTACACCCTCGAGCCCATCAACGAACCCGCCGACAACAACACCAA
CATGGTCGTCTTCGGCACGCCCCTCGCCCTGACGGACCACGGCGCCGCCT
GGGTCCTCAAGTACATCCGGGCTGTGGTTCAACGGGTCGAATCGGTGAAC
CCCAACATCCCCGTCATGTTCCAGGGTAGTTTCAAGTACCCGCAGTACTG
GGAAGGTGACTTCCCCGCGAGTACGAACCTCGTCTTCGACACGCATCATT
ATTACTACGAGCATATGGATTCCTCGTCGGAGAATCTGCCCGAGTATATT
CTTGCGGATGCGCGGGAGAAGTCGGGCACGGGCAAGTTCCCCGTGTTTGT
GGGCGAATGGGCAATCCAGGCGACGTATAATAATACGTTGGCGTTGAGGA
AGAGGAATGTGTTGGCGGGGTTGAAGACTTGGAGCAGTTTTTCGCAGGGG
AGTTCGTATTGGACGGCGAAGTTTACGGGGAATACGAGTGTCGCTGGACA
GGGGGAGCAGAAGGATTATTGGTGTTATGAGACGTTTATTGACGAGGGGT
ATTTCAATTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0005975 | carbohydrate metabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-19) |
| Note | CAZy:GH5_15 |
| Note | CAZy:GH5_44 |
| Note | CAZy:GH5 |
| Note | CAZy:GH5_9 |
| Note | CAZy:GH5_23 |
| DBxref | InterPro:IPR017853 |
| DBxref | InterPro:IPR001547 |
| DBxref | PFAM:PF00150 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An08 | supercontig | An08:221698..222858 + |
|
