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Sequences
The following sequences are available for this feature:
mRNA from alignment at An08:2409454..2410425- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_005739-T1 ID=CBS51388_005739-T1|Name=CBS51388_005739-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=972bp|location=Sequence derived from alignment at An08:2409454..2410425- (Aspergillus niger CBS 513.88)
ATGGCCTCTCTCCTCAAGAAACCATTGAAACTGGCCCTGATCCAACTGGC
CTCAGGTGCGTACGACTGTGATCTCTCTCCGTCCCCGCCTCCCTCACTCC
CTCCAAGTTGGCCCGAAATGAATCCTCAGAGTTGATGATCTTTAGGCGCC
GACAAAACAGTAAACCTCGCACATGCTCGCTCCAAGGTTCTCGAAGCCGC
CAAAGCTGGTGCCTCTCTTATCGTCCTTCCGGAATGTTTCAACTCTCCCT
ACGGTACTCAATACTTCCCAAAGTACGCCGAGACACTGCTTCCTTCCCCA
CCCACCCAAGAACAGTCCCCTTCCTACCATGCGCTTTCGTCCATCGCCGC
AGAAGCCAAGGCCTACTTGGTGGGTGGTAGCATTCCGGAACTTGAGCCGA
CCACGAAAAAGTACTACAACACCTCGCTGGTGTTCTCCCCCACCGGTGCC
TTAATTGGAACCCACCGCAAGACTCATCTCTTCGATATCGACATCCCCGG
CAAGATCACCTTCAAAGAGAGCGAGGTCCTGTCCCCTGGTAACCAGTTGA
CTGTCGTCGATCTGCCGGACTATGGGAAAATCGGACTGGCTATCTGCTAC
GATATCCGCTTCCCGGAGGCCGGCATGATTGCGGCTCGGAAGGGCGCCTT
CATGCTCGTGTACCCGGGCGCATTCAACACCACCACGGGTCCGCTGCACT
GGTCGCTGTTGGCTCGTGCTCGCGCCGTTGATAACCAGGTGTATGTGGCC
TTGTGCAGTCCCGCTCGAGACATGAGCGCCTCGTACCACGCCTATGGTCA
CAGTTTGGTTGCGGATCCGAGCGCAAATGTGTTGGCTGAGACGGAGGAGA
AGGAAGACATTATCTACGCGGATCTGGATAACGAGACGATCCAGAACACG
AGGAAGGGTATTCCCATTTACACGCAGCGGCGGTTCGATTTGTACTCGGA
CGTGAGTGCCGACAGCAAATAG back to topCoding sequence (CDS) from alignment at An08:2409454..2410425- >CBS51388_005739-T1 ID=CBS51388_005739-T1|Name=CBS51388_005739-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1764bp|location=Sequence derived from alignment at An08:2409454..2410425- (Aspergillus niger CBS 513.88)
GCGCCGACAAAACAGTAAACCTCGCACATGCTCGCTCCAAGGTTCTCGAA
GCCGCCAAAGCTGGTGCCTCTCTTATCGTCCTTCCGGAATGTTTCAACTC
TCCCTACGGTACTCAATACTTCCCAAAGTACGCCGAGACACTGCTTCCTT
CCCCACCCACCCAAGAACAGTCCCCTTCCTACCATGCGCTTTCGTCCATC
GCCGCAGAAGCCAAGGCCTACTTGGTGGGTGGTAGCATTCCGGAACTTGA
GCCGACCACGAAAAAGTACTACAACACCTCGCTGGTGTTCTCCCCCACCG
GTGCCTTAATTGGAACCCACCGCAAGACTCATCTCTTCGATATCGACATC
CCCGGCAAGATCACCTTCAAAGAGAGCGAGGTCCTGTCCCCTGGTAACCA
GTTGACTGTCGTCGATCTGCCGGACTATGGGAAAATCGGACTGGCTATCT
GCTACGATATCCGCTTCCCGGAGGCCGGCATGATTGCGGCTCGGAAGGGC
GCCTTCATGCTCGTGTACCCGGGCGCATTCAACACCACCACGGGTCCGCT
GCACTGGTCGCTGTTGGCTCGTGCTCGCGCCGTTGATAACCAGGTGTATG
TGGCCTTGTGCAGTCCCGCTCGAGACATGAGCGCCTCGTACCACGCCTAT
GGTCACAGTTTGGTTGCGGATCCGAGCGCAAATGTGTTGGCTGAGACGGA
GGAGAAGGAAGACATTATCTACGCGGATCTGGATAACGAGACGATCCAGA
ACACGAGGAAGGGTATTCCCATTTACACGCAGCGGCGGTTCGATTTGTAC
TCGGACGTGAGTGCCGACAGCAAATAGATGGCCTCTCTCCTCAAGAAACC
ATTGAAACTGGCCCTGATCCAACTGGCCTCAGGCGCCGACAAAACAGTAA
ACCTCGCACATGCTCGCTCCAAGGTTCTCGAAGCCGCCAAAGCTGGTGCC
TCTCTTATCGTCCTTCCGGAATGTTTCAACTCTCCCTACGGTACTCAATA
CTTCCCAAAGTACGCCGAGACACTGCTTCCTTCCCCACCCACCCAAGAAC
AGTCCCCTTCCTACCATGCGCTTTCGTCCATCGCCGCAGAAGCCAAGGCC
TACTTGGTGGGTGGTAGCATTCCGGAACTTGAGCCGACCACGAAAAAGTA
CTACAACACCTCGCTGGTGTTCTCCCCCACCGGTGCCTTAATTGGAACCC
ACCGCAAGACTCATCTCTTCGATATCGACATCCCCGGCAAGATCACCTTC
AAAGAGAGCGAGGTCCTGTCCCCTGGTAACCAGTTGACTGTCGTCGATCT
GCCGGACTATGGGAAAATCGGACTGGCTATCTGCTACGATATCCGCTTCC
CGGAGGCCGGCATGATTGCGGCTCGGAAGGGCGCCTTCATGCTCGTGTAC
CCGGGCGCATTCAACACCACCACGGGTCCGCTGCACTGGTCGCTGTTGGC
TCGTGCTCGCGCCGTTGATAACCAGGTGTATGTGGCCTTGTGCAGTCCCG
CTCGAGACATGAGCGCCTCGTACCACGCCTATGGTCACAGTTTGGTTGCG
GATCCGAGCGCAAATGTGTTGGCTGAGACGGAGGAGAAGGAAGACATTAT
CTACGCGGATCTGGATAACGAGACGATCCAGAACACGAGGAAGGGTATTC
CCATTTACACGCAGCGGCGGTTCGATTTGTACTCGGACGTGAGTGCCGAC
AGCAAATAGATGGCCTCTCTCCTCAAGAAACCATTGAAACTGGCCCTGAT
CCAACTGGCCTCAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006807 | nitrogen compound metabolic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR001110 |
| DBxref | InterPro:IPR036526 |
| DBxref | InterPro:IPR003010 |
| DBxref | PFAM:PF00795 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An08 | supercontig | An08:2409454..2410425 - |
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