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Sequences
The following sequences are available for this feature:
mRNA from alignment at An09:294162..296056+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_005980-T1 ID=CBS51388_005980-T1|Name=CBS51388_005980-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1895bp|location=Sequence derived from alignment at An09:294162..296056+ (Aspergillus niger CBS 513.88)
ATGGCCCAACCCACCAAACGGATTTTGCCCCCGTTGCTAGAGGAGTCGAC
CTTTGATAAGGTCCTAGACAAGCTTAGCGAAATTGTCGGCGAACCCAACA
TCTCGCGCAATCACTTGTATGGAAATCTCGAAGGACCACAGGGGCAGAAT
TGCTATGACGATATCTGGCCTCCGGGGAACCCAACCGATCATACCCCCAG
CGGCGCAGTGAGACCGAAAACCGTCAACGAGATTCAGCAGGTTCTACAGA
TTGCAAACGAGTATAAGCTCCCATTGTGGACTGTTTCCCGCGGACGGAAC
CTTGGGTATGTCAACATTTTCTTCCTGGTTTGTTTTCTCTGGGTCACTTT
TTATTTTAATTTTCTGTTCTGTCAAGCGATCGAACGCGATGCAATGGCTT
CTGACAAACAACTACTAGTTATGGAGGGAGTGGCGCTATTGTCCCTGGAA
GTGTTATACTTGACTTGCACCGAATGAACAAAATTATCGAAGTAAACGAG
GAATTCGCCTATGCTATTGTCGAGCCTGGAGTTTCGTTCTTCGATCTCTA
TGAATACATCCAAGATAGAGGCTACCGGCTCTGGCCATCATGCCCCGCGC
TAGGTTGGGGTTCGATAGTTGGAAATACGCTCGACAGAGGATTTGGCTAC
ACGCCGAACGGCGAGCATGCGGAACAACAATGTGGCATGGAAGTTGTTCT
TGCCACAGGAGAGGTTCTCAGAACTGGAATGGGTGCCCTGTCCGGAAGTC
CCATGTGGGCCTTGTATAAAGGGTAAGCAAGTCGTCGGGTTCCCAAACAG
GAGACCACTGCTACGAATAAATATCTTACCCTTTAATAGTGGCTATGGGC
CCAGTGTAGATGGTCTCTTTTACCAGTCTAACCTAGGTAAGCAAAAGCCA
GGGCAGATCTATTGGGTAGTAGCTGTGCTGATAAAAGAACAGGAGTTGTT
ACCAAGATTGGGATCCATCTAACACCAGCTCCTGTGTGTTTTATGGACTG
CGTAGTCAGTGTTCCAAACGAGGAAGACATCGGCGCACTAGTACGAATCA
TGTCCGCTCTTGAGAGGGAAGGCATCGTTCAAAACCACGCCTCGATCGCA
AACCCATACCGGCAAGCCCTGTCCTCGGAAGACCCACTTGTGTTAGGAAG
AGCGGTGGGCCCAGGGATAGAAGGTGGCTATGCTACAAATGCTGACATGA
CAAAGCTTGCAAAAGAACAGGGCTGGGGCTACTGGAAAGCCCATTTTGCT
ATCTATGGCGCTTCGGGTGCCTTTATAGACGCTTGTTGGACCATCGTACA
GGAGCGTTTTGCCGCTATCCCAGGAGCTGCGGCCACCGCGGAGAGACACG
AGCACAAGCTTGGCGGTCGTTTGAATGCCGCAGAGTTACCCATGGGTGAA
ATACCACACACTGGATACCCACGTCTTACCGCCAAGGATTTTGTTGATAT
TAGGGGAGCCAAGGGTGGCCATATTGCCTTTTCGCCGCTCTTCCCCCCAG
ATGGAAAGCAGCTACAGGAGTGGTTTTCTAGGATACGGCCGTTGGTTGAG
AAGGCAGGTTTTGATCTGTTTTCAGACTTCCATATTTATGGGCGGTATAT
TATAGGCATTGTGCTTGTGGTATACACCCCGGCTGAAGCGGCTAGGGCTA
AAAGTCTGTTTGATGAGCTACTAAAAGACGGCGTGGAGAGGTCCAGCGTT
TCGGAATATCGCACACATATCCACTTCATGGACCAAGTTCGGAGACATTA
TGATTGGGGAAATGGCATCCTCCATCGCACACTGGGTTCTATTAAGAAGA
CGCTAGATCCCAATGGCATCTTATCCCAGGGGAAGTCAGGGATTTGGACG
TCATCGAGACCCCTTACGGAAGCTATAAGGAATACGAGGCTTTGA back to topCoding sequence (CDS) from alignment at An09:294162..296056+ >CBS51388_005980-T1 ID=CBS51388_005980-T1|Name=CBS51388_005980-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=6636bp|location=Sequence derived from alignment at An09:294162..296056+ (Aspergillus niger CBS 513.88)
ATGGCCCAACCCACCAAACGGATTTTGCCCCCGTTGCTAGAGGAGTCGAC
CTTTGATAAGGTCCTAGACAAGCTTAGCGAAATTGTCGGCGAACCCAACA
TCTCGCGCAATCACTTGTATGGAAATCTCGAAGGACCACAGGGGCAGAAT
TGCTATGACGATATCTGGCCTCCGGGGAACCCAACCGATCATACCCCCAG
CGGCGCAGTGAGACCGAAAACCGTCAACGAGATTCAGCAGGTTCTACAGA
TTGCAAACGAGTATAAGCTCCCATTGTGGACTGTTTCCCGCGGACGGAAC
CTTGGTTATGGAGGGAGTGGCGCTATTGTCCCTGGAAGTGTTATACTTGA
CTTGCACCGAATGAACAAAATTATCGAAGTAAACGAGGAATTCGCCTATG
CTATTGTCGAGCCTGGAGTTTCGTTCTTCGATCTCTATGAATACATCCAA
GATAGAGGCTACCGGCTCTGGCCATCATGCCCCGCGCTAGGTTGGGGTTC
GATAGTTGGAAATACGCTCGACAGAGGATTTGGCTACACGCCGAACGGCG
AGCATGCGGAACAACAATGTGGCATGGAAGTTGTTCTTGCCACAGGAGAG
GTTCTCAGAACTGGAATGGGTGCCCTGTCCGGAAGTCCCATGTGGGCCTT
GTATAAAGGTGGCTATGGGCCCAGTGTAGATGGTCTCTTTTACCAGTCTA
ACCTAGGAGTTGTTACCAAGATTGGGATCCATCTAACACCAGCTCCTGTG
TGTTTTATGGACTGCGTAGTCAGTGTTCCAAACGAGGAAGACATCGGCGC
ACTAGTACGAATCATGTCCGCTCTTGAGAGGGAAGGCATCGTTCAAAACC
ACGCCTCGATCGCAAACCCATACCGGCAAGCCCTGTCCTCGGAAGACCCA
CTTGTGTTAGGAAGAGCGGTGGGCCCAGGGATAGAAGGTGGCTATGCTAC
AAATGCTGACATGACAAAGCTTGCAAAAGAACAGGGCTGGGGCTACTGGA
AAGCCCATTTTGCTATCTATGGCGCTTCGGGTGCCTTTATAGACGCTTGT
TGGACCATCGTACAGGAGCGTTTTGCCGCTATCCCAGGAGCTGCGGCCAC
CGCGGAGAGACACGAGCACAAGCTTGGCGGTCGTTTGAATGCCGCAGAGT
TACCCATGGGTGAAATACCACACACTGGATACCCACGTCTTACCGCCAAG
GATTTTGTTGATATTAGGGGAGCCAAGGGTGGCCATATTGCCTTTTCGCC
GCTCTTCCCCCCAGATGGAAAGCAGCTACAGGAGTGGTTTTCTAGGATAC
GGCCGTTGGTTGAGAAGGCAGGTTTTGATCTGTTTTCAGACTTCCATATT
TATGGGCGGTATATTATAGGCATTGTGCTTGTGGTATACACCCCGGCTGA
AGCGGCTAGGGCTAAAAGTCTGTTTGATGAGCTACTAAAAGACGGCGTGG
AGAGGTCCAGCGTTTCGGAATATCGCACACATATCCACTTCATGGACCAA
GTTCGGAGACATTATGATTGGGGAAATGGCATCCTCCATCGCACACTGGG
TTCTATTAAGAAGACGCTAGATCCCAATGGCATCTTATCCCAGGGGAAGT
CAGGGATTTGGACGTCATCGAGACCCCTTACGGAAGCTATAAGGAATACG
AGGCTTTGAATGGCCCAACCCACCAAACGGATTTTGCCCCCGTTGCTAGA
GGAGTCGACCTTTGATAAGGTCCTAGACAAGCTTAGCGAAATTGTCGGCG
AACCCAACATCTCGCGCAATCACTTGTATGGAAATCTCGAAGGACCACAG
GGGCAGAATTGCTATGACGATATCTGGCCTCCGGGGAACCCAACCGATCA
TACCCCCAGCGGCGCAGTGAGACCGAAAACCGTCAACGAGATTCAGCAGG
TTCTACAGATTGCAAACGAGTATAAGCTCCCATTGTGGACTGTTTCCCGC
GGACGGAACCTTGGTTATGGAGGGAGTGGCGCTATTGTCCCTGGAAGTGT
TATACTTGACTTGCACCGAATGAACAAAATTATCGAAGTAAACGAGGAAT
TCGCCTATGCTATTGTCGAGCCTGGAGTTTCGTTCTTCGATCTCTATGAA
TACATCCAAGATAGAGGCTACCGGCTCTGGCCATCATGCCCCGCGCTAGG
TTGGGGTTCGATAGTTGGAAATACGCTCGACAGAGGATTTGGCTACACGC
CGAACGGCGAGCATGCGGAACAACAATGTGGCATGGAAGTTGTTCTTGCC
ACAGGAGAGGTTCTCAGAACTGGAATGGGTGCCCTGTCCGGAAGTCCCAT
GTGGGCCTTGTATAAAGGTGGCTATGGGCCCAGTGTAGATGGTCTCTTTT
ACCAGTCTAACCTAGGAGTTGTTACCAAGATTGGGATCCATCTAACACCA
GCTCCTGTGTGTTTTATGGACTGCGTAGTCAGTGTTCCAAACGAGGAAGA
CATCGGCGCACTAGTACGAATCATGTCCGCTCTTGAGAGGGAAGGCATCG
TTCAAAACCACGCCTCGATCGCAAACCCATACCGGCAAGCCCTGTCCTCG
GAAGACCCACTTGTGTTAGGAAGAGCGGTGGGCCCAGGGATAGAAGGTGG
CTATGCTACAAATGCTGACATGACAAAGCTTGCAAAAGAACAGGGCTGGG
GCTACTGGAAAGCCCATTTTGCTATCTATGGCGCTTCGGGTGCCTTTATA
GACGCTTGTTGGACCATCGTACAGGAGCGTTTTGCCGCTATCCCAGGAGC
TGCGGCCACCGCGGAGAGACACGAGCACAAGCTTGGCGGTCGTTTGAATG
CCGCAGAGTTACCCATGGGTGAAATACCACACACTGGATACCCACGTCTT
ACCGCCAAGGATTTTGTTGATATTAGGGGAGCCAAGGGTGGCCATATTGC
CTTTTCGCCGCTCTTCCCCCCAGATGGAAAGCAGCTACAGGAGTGGTTTT
CTAGGATACGGCCGTTGGTTGAGAAGGCAGGTTTTGATCTGTTTTCAGAC
TTCCATATTTATGGGCGGTATATTATAGGCATTGTGCTTGTGGTATACAC
CCCGGCTGAAGCGGCTAGGGCTAAAAGTCTGTTTGATGAGCTACTAAAAG
ACGGCGTGGAGAGGTCCAGCGTTTCGGAATATCGCACACATATCCACTTC
ATGGACCAAGTTCGGAGACATTATGATTGGGGAAATGGCATCCTCCATCG
CACACTGGGTTCTATTAAGAAGACGCTAGATCCCAATGGCATCTTATCCC
AGGGGAAGTCAGGGATTTGGACGTCATCGAGACCCCTTACGGAAGCTATA
AGGAATACGAGGCTTTGAATGGCCCAACCCACCAAACGGATTTTGCCCCC
GTTGCTAGAGGAGTCGACCTTTGATAAGGTCCTAGACAAGCTTAGCGAAA
TTGTCGGCGAACCCAACATCTCGCGCAATCACTTGTATGGAAATCTCGAA
GGACCACAGGGGCAGAATTGCTATGACGATATCTGGCCTCCGGGGAACCC
AACCGATCATACCCCCAGCGGCGCAGTGAGACCGAAAACCGTCAACGAGA
TTCAGCAGGTTCTACAGATTGCAAACGAGTATAAGCTCCCATTGTGGACT
GTTTCCCGCGGACGGAACCTTGGTTATGGAGGGAGTGGCGCTATTGTCCC
TGGAAGTGTTATACTTGACTTGCACCGAATGAACAAAATTATCGAAGTAA
ACGAGGAATTCGCCTATGCTATTGTCGAGCCTGGAGTTTCGTTCTTCGAT
CTCTATGAATACATCCAAGATAGAGGCTACCGGCTCTGGCCATCATGCCC
CGCGCTAGGTTGGGGTTCGATAGTTGGAAATACGCTCGACAGAGGATTTG
GCTACACGCCGAACGGCGAGCATGCGGAACAACAATGTGGCATGGAAGTT
GTTCTTGCCACAGGAGAGGTTCTCAGAACTGGAATGGGTGCCCTGTCCGG
AAGTCCCATGTGGGCCTTGTATAAAGGTGGCTATGGGCCCAGTGTAGATG
GTCTCTTTTACCAGTCTAACCTAGGAGTTGTTACCAAGATTGGGATCCAT
CTAACACCAGCTCCTGTGTGTTTTATGGACTGCGTAGTCAGTGTTCCAAA
CGAGGAAGACATCGGCGCACTAGTACGAATCATGTCCGCTCTTGAGAGGG
AAGGCATCGTTCAAAACCACGCCTCGATCGCAAACCCATACCGGCAAGCC
CTGTCCTCGGAAGACCCACTTGTGTTAGGAAGAGCGGTGGGCCCAGGGAT
AGAAGGTGGCTATGCTACAAATGCTGACATGACAAAGCTTGCAAAAGAAC
AGGGCTGGGGCTACTGGAAAGCCCATTTTGCTATCTATGGCGCTTCGGGT
GCCTTTATAGACGCTTGTTGGACCATCGTACAGGAGCGTTTTGCCGCTAT
CCCAGGAGCTGCGGCCACCGCGGAGAGACACGAGCACAAGCTTGGCGGTC
GTTTGAATGCCGCAGAGTTACCCATGGGTGAAATACCACACACTGGATAC
CCACGTCTTACCGCCAAGGATTTTGTTGATATTAGGGGAGCCAAGGGTGG
CCATATTGCCTTTTCGCCGCTCTTCCCCCCAGATGGAAAGCAGCTACAGG
AGTGGTTTTCTAGGATACGGCCGTTGGTTGAGAAGGCAGGTTTTGATCTG
TTTTCAGACTTCCATATTTATGGGCGGTATATTATAGGCATTGTGCTTGT
GGTATACACCCCGGCTGAAGCGGCTAGGGCTAAAAGTCTGTTTGATGAGC
TACTAAAAGACGGCGTGGAGAGGTCCAGCGTTTCGGAATATCGCACACAT
ATCCACTTCATGGACCAAGTTCGGAGACATTATGATTGGGGAAATGGCAT
CCTCCATCGCACACTGGGTTCTATTAAGAAGACGCTAGATCCCAATGGCA
TCTTATCCCAGGGGAAGTCAGGGATTTGGACGTCATCGAGACCCCTTACG
GAAGCTATAAGGAATACGAGGCTTTGAATGGCCCAACCCACCAAACGGAT
TTTGCCCCCGTTGCTAGAGGAGTCGACCTTTGATAAGGTCCTAGACAAGC
TTAGCGAAATTGTCGGCGAACCCAACATCTCGCGCAATCACTTGTATGGA
AATCTCGAAGGACCACAGGGGCAGAATTGCTATGACGATATCTGGCCTCC
GGGGAACCCAACCGATCATACCCCCAGCGGCGCAGTGAGACCGAAAACCG
TCAACGAGATTCAGCAGGTTCTACAGATTGCAAACGAGTATAAGCTCCCA
TTGTGGACTGTTTCCCGCGGACGGAACCTTGGTTATGGAGGGAGTGGCGC
TATTGTCCCTGGAAGTGTTATACTTGACTTGCACCGAATGAACAAAATTA
TCGAAGTAAACGAGGAATTCGCCTATGCTATTGTCGAGCCTGGAGTTTCG
TTCTTCGATCTCTATGAATACATCCAAGATAGAGGCTACCGGCTCTGGCC
ATCATGCCCCGCGCTAGGTTGGGGTTCGATAGTTGGAAATACGCTCGACA
GAGGATTTGGCTACACGCCGAACGGCGAGCATGCGGAACAACAATGTGGC
ATGGAAGTTGTTCTTGCCACAGGAGAGGTTCTCAGAACTGGAATGGGTGC
CCTGTCCGGAAGTCCCATGTGGGCCTTGTATAAAGGTGGCTATGGGCCCA
GTGTAGATGGTCTCTTTTACCAGTCTAACCTAGGAGTTGTTACCAAGATT
GGGATCCATCTAACACCAGCTCCTGTGTGTTTTATGGACTGCGTAGTCAG
TGTTCCAAACGAGGAAGACATCGGCGCACTAGTACGAATCATGTCCGCTC
TTGAGAGGGAAGGCATCGTTCAAAACCACGCCTCGATCGCAAACCCATAC
CGGCAAGCCCTGTCCTCGGAAGACCCACTTGTGTTAGGAAGAGCGGTGGG
CCCAGGGATAGAAGGTGGCTATGCTACAAATGCTGACATGACAAAGCTTG
CAAAAGAACAGGGCTGGGGCTACTGGAAAGCCCATTTTGCTATCTATGGC
GCTTCGGGTGCCTTTATAGACGCTTGTTGGACCATCGTACAGGAGCGTTT
TGCCGCTATCCCAGGAGCTGCGGCCACCGCGGAGAGACACGAGCACAAGC
TTGGCGGTCGTTTGAATGCCGCAGAGTTACCCATGGGTGAAATACCACAC
ACTGGATACCCACGTCTTACCGCCAAGGATTTTGTTGATATTAGGGGAGC
CAAGGGTGGCCATATTGCCTTTTCGCCGCTCTTCCCCCCAGATGGAAAGC
AGCTACAGGAGTGGTTTTCTAGGATACGGCCGTTGGTTGAGAAGGCAGGT
TTTGATCTGTTTTCAGACTTCCATATTTATGGGCGGTATATTATAGGCAT
TGTGCTTGTGGTATACACCCCGGCTGAAGCGGCTAGGGCTAAAAGTCTGT
TTGATGAGCTACTAAAAGACGGCGTGGAGAGGTCCAGCGTTTCGGAATAT
CGCACACATATCCACTTCATGGACCAAGTTCGGAGACATTATGATTGGGG
AAATGGCATCCTCCATCGCACACTGGGTTCTATTAAGAAGACGCTAGATC
CCAATGGCATCTTATCCCAGGGGAAGTCAGGGATTTGGACGTCATCGAGA
CCCCTTACGGAAGCTATAAGGAATACGAGGCTTTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055114 | oxidation-reduction process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0071949 | FAD binding |
| GO:0003824 | catalytic activity |
| GO:0016491 | oxidoreductase activity |
| GO:0050660 | flavin adenine dinucleotide binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | CAZy:AA4 |
| DBxref | InterPro:IPR036318 |
| DBxref | InterPro:IPR016164 |
| DBxref | InterPro:IPR016166 |
| DBxref | InterPro:IPR016171 |
| DBxref | InterPro:IPR016170 |
| DBxref | InterPro:IPR016167 |
| DBxref | InterPro:IPR004113 |
| DBxref | InterPro:IPR006094 |
| DBxref | InterPro:IPR016169 |
| DBxref | PFAM:PF01565 |
| DBxref | PFAM:PF02913 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An09 | supercontig | An09:294162..296056 + |
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