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CBS51388_006273-T1, CBS51388_006273-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_006273-T1
Unique NameCBS51388_006273-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An09:1154917..1156281+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_006273-T1 ID=CBS51388_006273-T1|Name=CBS51388_006273-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1365bp|location=Sequence derived from alignment at An09:1154917..1156281+ (Aspergillus niger CBS 513.88)
ATGGCGTCTCGTCCTACCGTCACCATCGCCGGCGCTGATGGCAAGCCCAC
GGGGGCTACCTACCCCCTCCCGGCTGTTTTCGCCTCCCCCATCCGTCTTG
ATGTTGTCCAGTATGTTTCAGCCTTTTTACGACAAAAAATCGATCTCGCA
GAGAGGAATCATGAGAAGCGGAGGATATTTGATGGCTGACGGATTTCGAA
TTACAGGCAGGTGCACACCGGTATGGCCAAGAACAAGAGACAGCCTTACG
CCGTGAGCGAGAAGGCTGGTGAACAGACCTCTGCTGAGTCCTGGGGTACC
GGTATGTGCACAAATTTGAAGGAACGCCAAGAAATTCGCAGGGGAATTGG
GATGGCTGATGGATGTGAATAACTTCAGGTCGCGCTGTCGCTCGTATCCC
CCGTGTCTCCGGTGGTGGTACTCACCGTGCCGGTCAGGCCGCTTTCGGTA
ACCAGTGCCGTTCCGGTCGTATGTTCGCCCCTACCAAGGTCTGGCGCAAG
TGGCACCAGAAGGTCAACGTTGGCCAGAGGTATGATAATAATCCCGACCG
ACGAGGTAACACGATTGAGCCAGGAGAAGGTGAACTAATGGCTGCTTTTT
AGACGTTTCGCTACTGCCTCTGCCCTCGCTGCTTCTTCCGTTCCTTCTCT
TCTGTTCGCTCGCGGTCACCGCGTTGCCAACGTTCCTGAGGTCCCTCTGG
TCGTTGACTCCAAGACCTTCGAGAACTCCGCTGTTACCAAGACCAAGGCC
GCCGTTGCCCTCCTCCAGGCCGTCGGTGCCGGTGCCGACCTTGTCAAGGT
CCAGAAGTCCCGCAAGATGCGTGCCGGTAAGGGTAAGCTGAGGAACCGCC
GCTTCCGCCAGCGCCGCGGTCCTCTGGTTGTCTACAACCCCGAGGTTGAT
GGCAAGGAGCTCGTCCGTGCCTTCCGCAACATCCCCGGTGTTGAGACCTC
CTCCGTCTTCTCCCTCAACCTCCTCCAGCTCGCCCCCGGTGGTCACCTCG
GTCGCTTCATCGTCTGGTCCTCTGCTGCCTTCGAGGCCCTCGACAAGGTC
TACGGCACCACCACCACCGCCTCCGCCCTCAAGAAGGACTACCTCCTCCC
CCAGAACGTTGTTGCCAACGCCGACCTGGCCCGTCTCATCAACTCTTCTG
AGATCCAGTCCGTCCTCCGCGCCCCCAAGGGTGAGGCTCGCACCAAGCGT
ACCAACATCCAGAAGAAGAACCCTCTCCGCAACAAGCAGGTCATGCTCCG
TCTCAACCCTTACGCTGCTGCTTTCTCCAAGGAGAAGCTCGGCCAGCAGA
AGGTTGAGGCCGCTAAGCCCGAGCGCGCTTCCAAGGACTTCCTCAACACC
CTCTACGAGGCGTAA
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Coding sequence (CDS) from alignment at An09:1154917..1156281+

>CBS51388_006273-T1 ID=CBS51388_006273-T1|Name=CBS51388_006273-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4476bp|location=Sequence derived from alignment at An09:1154917..1156281+ (Aspergillus niger CBS 513.88)
ATGGCGTCTCGTCCTACCGTCACCATCGCCGGCGCTGATGGCAAGCCCAC
GGGGGCTACCTACCCCCTCCCGGCTGTTTTCGCCTCCCCCATCCGTCTTG
ATGTTGTCCAGCAGGTGCACACCGGTATGGCCAAGAACAAGAGACAGCCT
TACGCCGTGAGCGAGAAGGCTGGTGAACAGACCTCTGCTGAGTCCTGGGG
TACCGGTCGCGCTGTCGCTCGTATCCCCCGTGTCTCCGGTGGTGGTACTC
ACCGTGCCGGTCAGGCCGCTTTCGGTAACCAGTGCCGTTCCGGTCGTATG
TTCGCCCCTACCAAGGTCTGGCGCAAGTGGCACCAGAAGGTCAACGTTGG
CCAGAGACGTTTCGCTACTGCCTCTGCCCTCGCTGCTTCTTCCGTTCCTT
CTCTTCTGTTCGCTCGCGGTCACCGCGTTGCCAACGTTCCTGAGGTCCCT
CTGGTCGTTGACTCCAAGACCTTCGAGAACTCCGCTGTTACCAAGACCAA
GGCCGCCGTTGCCCTCCTCCAGGCCGTCGGTGCCGGTGCCGACCTTGTCA
AGGTCCAGAAGTCCCGCAAGATGCGTGCCGGTAAGGGTAAGCTGAGGAAC
CGCCGCTTCCGCCAGCGCCGCGGTCCTCTGGTTGTCTACAACCCCGAGGT
TGATGGCAAGGAGCTCGTCCGTGCCTTCCGCAACATCCCCGGTGTTGAGA
CCTCCTCCGTCTTCTCCCTCAACCTCCTCCAGCTCGCCCCCGGTGGTCAC
CTCGGTCGCTTCATCGTCTGGTCCTCTGCTGCCTTCGAGGCCCTCGACAA
GGTCTACGGCACCACCACCACCGCCTCCGCCCTCAAGAAGGACTACCTCC
TCCCCCAGAACGTTGTTGCCAACGCCGACCTGGCCCGTCTCATCAACTCT
TCTGAGATCCAGTCCGTCCTCCGCGCCCCCAAGGGTGAGGCTCGCACCAA
GCGTACCAACATCCAGAAGAAGAACCCTCTCCGCAACAAGCAGGTCATGC
TCCGTCTCAACCCTTACGCTGCTGCTTTCTCCAAGGAGAAGCTCGGCCAG
CAGAAGGTTGAGGCCGCTAAGCCCGAGCGCGCTTCCAAGGACTTCCTCAA
CACCCTCTACGAGGCGTAAATGGCGTCTCGTCCTACCGTCACCATCGCCG
GCGCTGATGGCAAGCCCACGGGGGCTACCTACCCCCTCCCGGCTGTTTTC
GCCTCCCCCATCCGTCTTGATGTTGTCCAGCAGGTGCACACCGGTATGGC
CAAGAACAAGAGACAGCCTTACGCCGTGAGCGAGAAGGCTGGTGAACAGA
CCTCTGCTGAGTCCTGGGGTACCGGTCGCGCTGTCGCTCGTATCCCCCGT
GTCTCCGGTGGTGGTACTCACCGTGCCGGTCAGGCCGCTTTCGGTAACCA
GTGCCGTTCCGGTCGTATGTTCGCCCCTACCAAGGTCTGGCGCAAGTGGC
ACCAGAAGGTCAACGTTGGCCAGAGACGTTTCGCTACTGCCTCTGCCCTC
GCTGCTTCTTCCGTTCCTTCTCTTCTGTTCGCTCGCGGTCACCGCGTTGC
CAACGTTCCTGAGGTCCCTCTGGTCGTTGACTCCAAGACCTTCGAGAACT
CCGCTGTTACCAAGACCAAGGCCGCCGTTGCCCTCCTCCAGGCCGTCGGT
GCCGGTGCCGACCTTGTCAAGGTCCAGAAGTCCCGCAAGATGCGTGCCGG
TAAGGGTAAGCTGAGGAACCGCCGCTTCCGCCAGCGCCGCGGTCCTCTGG
TTGTCTACAACCCCGAGGTTGATGGCAAGGAGCTCGTCCGTGCCTTCCGC
AACATCCCCGGTGTTGAGACCTCCTCCGTCTTCTCCCTCAACCTCCTCCA
GCTCGCCCCCGGTGGTCACCTCGGTCGCTTCATCGTCTGGTCCTCTGCTG
CCTTCGAGGCCCTCGACAAGGTCTACGGCACCACCACCACCGCCTCCGCC
CTCAAGAAGGACTACCTCCTCCCCCAGAACGTTGTTGCCAACGCCGACCT
GGCCCGTCTCATCAACTCTTCTGAGATCCAGTCCGTCCTCCGCGCCCCCA
AGGGTGAGGCTCGCACCAAGCGTACCAACATCCAGAAGAAGAACCCTCTC
CGCAACAAGCAGGTCATGCTCCGTCTCAACCCTTACGCTGCTGCTTTCTC
CAAGGAGAAGCTCGGCCAGCAGAAGGTTGAGGCCGCTAAGCCCGAGCGCG
CTTCCAAGGACTTCCTCAACACCCTCTACGAGGCGTAAATGGCGTCTCGT
CCTACCGTCACCATCGCCGGCGCTGATGGCAAGCCCACGGGGGCTACCTA
CCCCCTCCCGGCTGTTTTCGCCTCCCCCATCCGTCTTGATGTTGTCCAGC
AGGTGCACACCGGTATGGCCAAGAACAAGAGACAGCCTTACGCCGTGAGC
GAGAAGGCTGGTGAACAGACCTCTGCTGAGTCCTGGGGTACCGGTCGCGC
TGTCGCTCGTATCCCCCGTGTCTCCGGTGGTGGTACTCACCGTGCCGGTC
AGGCCGCTTTCGGTAACCAGTGCCGTTCCGGTCGTATGTTCGCCCCTACC
AAGGTCTGGCGCAAGTGGCACCAGAAGGTCAACGTTGGCCAGAGACGTTT
CGCTACTGCCTCTGCCCTCGCTGCTTCTTCCGTTCCTTCTCTTCTGTTCG
CTCGCGGTCACCGCGTTGCCAACGTTCCTGAGGTCCCTCTGGTCGTTGAC
TCCAAGACCTTCGAGAACTCCGCTGTTACCAAGACCAAGGCCGCCGTTGC
CCTCCTCCAGGCCGTCGGTGCCGGTGCCGACCTTGTCAAGGTCCAGAAGT
CCCGCAAGATGCGTGCCGGTAAGGGTAAGCTGAGGAACCGCCGCTTCCGC
CAGCGCCGCGGTCCTCTGGTTGTCTACAACCCCGAGGTTGATGGCAAGGA
GCTCGTCCGTGCCTTCCGCAACATCCCCGGTGTTGAGACCTCCTCCGTCT
TCTCCCTCAACCTCCTCCAGCTCGCCCCCGGTGGTCACCTCGGTCGCTTC
ATCGTCTGGTCCTCTGCTGCCTTCGAGGCCCTCGACAAGGTCTACGGCAC
CACCACCACCGCCTCCGCCCTCAAGAAGGACTACCTCCTCCCCCAGAACG
TTGTTGCCAACGCCGACCTGGCCCGTCTCATCAACTCTTCTGAGATCCAG
TCCGTCCTCCGCGCCCCCAAGGGTGAGGCTCGCACCAAGCGTACCAACAT
CCAGAAGAAGAACCCTCTCCGCAACAAGCAGGTCATGCTCCGTCTCAACC
CTTACGCTGCTGCTTTCTCCAAGGAGAAGCTCGGCCAGCAGAAGGTTGAG
GCCGCTAAGCCCGAGCGCGCTTCCAAGGACTTCCTCAACACCCTCTACGA
GGCGTAAATGGCGTCTCGTCCTACCGTCACCATCGCCGGCGCTGATGGCA
AGCCCACGGGGGCTACCTACCCCCTCCCGGCTGTTTTCGCCTCCCCCATC
CGTCTTGATGTTGTCCAGCAGGTGCACACCGGTATGGCCAAGAACAAGAG
ACAGCCTTACGCCGTGAGCGAGAAGGCTGGTGAACAGACCTCTGCTGAGT
CCTGGGGTACCGGTCGCGCTGTCGCTCGTATCCCCCGTGTCTCCGGTGGT
GGTACTCACCGTGCCGGTCAGGCCGCTTTCGGTAACCAGTGCCGTTCCGG
TCGTATGTTCGCCCCTACCAAGGTCTGGCGCAAGTGGCACCAGAAGGTCA
ACGTTGGCCAGAGACGTTTCGCTACTGCCTCTGCCCTCGCTGCTTCTTCC
GTTCCTTCTCTTCTGTTCGCTCGCGGTCACCGCGTTGCCAACGTTCCTGA
GGTCCCTCTGGTCGTTGACTCCAAGACCTTCGAGAACTCCGCTGTTACCA
AGACCAAGGCCGCCGTTGCCCTCCTCCAGGCCGTCGGTGCCGGTGCCGAC
CTTGTCAAGGTCCAGAAGTCCCGCAAGATGCGTGCCGGTAAGGGTAAGCT
GAGGAACCGCCGCTTCCGCCAGCGCCGCGGTCCTCTGGTTGTCTACAACC
CCGAGGTTGATGGCAAGGAGCTCGTCCGTGCCTTCCGCAACATCCCCGGT
GTTGAGACCTCCTCCGTCTTCTCCCTCAACCTCCTCCAGCTCGCCCCCGG
TGGTCACCTCGGTCGCTTCATCGTCTGGTCCTCTGCTGCCTTCGAGGCCC
TCGACAAGGTCTACGGCACCACCACCACCGCCTCCGCCCTCAAGAAGGAC
TACCTCCTCCCCCAGAACGTTGTTGCCAACGCCGACCTGGCCCGTCTCAT
CAACTCTTCTGAGATCCAGTCCGTCCTCCGCGCCCCCAAGGGTGAGGCTC
GCACCAAGCGTACCAACATCCAGAAGAAGAACCCTCTCCGCAACAAGCAG
GTCATGCTCCGTCTCAACCCTTACGCTGCTGCTTTCTCCAAGGAGAAGCT
CGGCCAGCAGAAGGTTGAGGCCGCTAAGCCCGAGCGCGCTTCCAAGGACT
TCCTCAACACCCTCTACGAGGCGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_006273CBS51388_006273Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006273-T1.exon1CBS51388_006273-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_006273-T1.exon2CBS51388_006273-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_006273-T1.exon3CBS51388_006273-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_006273-T1.exon4CBS51388_006273-T1.exon4Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006273-T1.cdsCBS51388_006273-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006273-T1CBS51388_006273-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_9.7
NoteBUSCO:EOG0926354S
DBxrefInterPro:IPR013000
DBxrefInterPro:IPR025755
DBxrefInterPro:IPR023574
DBxrefInterPro:IPR002136
DBxrefPFAM:PF14374
DBxrefPFAM:PF00573
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An09supercontigAn09:1154917..1156281 +
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