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Sequences
The following sequences are available for this feature:
mRNA from alignment at An11:149454..150533- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_006551-T1 ID=CBS51388_006551-T1|Name=CBS51388_006551-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1080bp|location=Sequence derived from alignment at An11:149454..150533- (Aspergillus niger CBS 513.88)
ATGATGATGGAAGACGAAGATGATGATTTTTATGACCCCGCCGATGCGGT
GCCTGTAACTCAGCATCAAAACGGGTCTCAGCATCCCCAGGCAGATTCAG
GACCCCACGACGCCAATGATGCGGAAGAGGAGGAGATAGAGGTGGAAGAA
GATGAGGTATGCGCATGGCGACAACTAATCTATCCTGTTACTGTCGCTAA
CTCTCGCATAGGATGACTTCAATATTATTACCGAAGCACCAGCAGACGCA
CCCCCTCCGGAAGTGTAAGTCCGCTACCTCTGCTCGACGCATTTCACCTT
GTTAATTTATTGAACAGCCCACATCCTCGTCACGCCAGCCTCCGCGCGGA
GTCTCAAAGACCCTCCTCTGCAGATGTCTCTACGATATCAAAATCAATAA
CACCCACCGTTACCCCCAAACTTGAATCTGCTACCCCTGTGCCTGCTACT
GCAAGGCCTACGGTCCCTCAGAAGCCCGGTTCCGCCTACCCTCCAGTCCA
TGCGTCGAATATCGATGTCCACGCGAACCCTATCCATCCGGCGACCGGTA
AACCAATCATGTCAACAGACATGGACACCGACTTCCCAGAGGATGACAAG
CCTTGGAGGCGGCCAGGCTCCGACATTACGGATTATTTCAACTACGGGTT
TGACGAGTTCACGTGGGCCAGCTATGTGTTGAAGCAACAGGAGCTACGCA
AGGAAATTGGAGATCAGAAGAAACAATTGGATGATATGCAAGCCTTCTTA
AGCATGGGGCTCCCGCCAATGCCCGGAGGTCCTCCGGGACCAGGAGGACC
TCCAGGAAGCGCACCGCCTCCTATGCCCGGCATGCCTGGGATGCCGGATA
TGTCACAAGAGATGATGCAAGGCATGCTGACGAGCATGATGTCACAAGGC
CTGGACCCCTCATCCATGGATCCTATGGCATTTATGCAGCATGCGCAGGC
CATGATGGGTGGACAACCCGGCGCAGGCGGCGGACAACAAGGTCAACCCG
GATTTGGTGGGCAAGGTGGTGGCCAGCCTCAGATGGGATACGGGGGCGGC
TTTGGTCGGGGTCGCGGGAGAAGGTGGTAA back to topCoding sequence (CDS) from alignment at An11:149454..150533- >CBS51388_006551-T1 ID=CBS51388_006551-T1|Name=CBS51388_006551-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2916bp|location=Sequence derived from alignment at An11:149454..150533- (Aspergillus niger CBS 513.88)
CCCACATCCTCGTCACGCCAGCCTCCGCGCGGAGTCTCAAAGACCCTCCT
CTGCAGATGTCTCTACGATATCAAAATCAATAACACCCACCGTTACCCCC
AAACTTGAATCTGCTACCCCTGTGCCTGCTACTGCAAGGCCTACGGTCCC
TCAGAAGCCCGGTTCCGCCTACCCTCCAGTCCATGCGTCGAATATCGATG
TCCACGCGAACCCTATCCATCCGGCGACCGGTAAACCAATCATGTCAACA
GACATGGACACCGACTTCCCAGAGGATGACAAGCCTTGGAGGCGGCCAGG
CTCCGACATTACGGATTATTTCAACTACGGGTTTGACGAGTTCACGTGGG
CCAGCTATGTGTTGAAGCAACAGGAGCTACGCAAGGAAATTGGAGATCAG
AAGAAACAATTGGATGATATGCAAGCCTTCTTAAGCATGGGGCTCCCGCC
AATGCCCGGAGGTCCTCCGGGACCAGGAGGACCTCCAGGAAGCGCACCGC
CTCCTATGCCCGGCATGCCTGGGATGCCGGATATGTCACAAGAGATGATG
CAAGGCATGCTGACGAGCATGATGTCACAAGGCCTGGACCCCTCATCCAT
GGATCCTATGGCATTTATGCAGCATGCGCAGGCCATGATGGGTGGACAAC
CCGGCGCAGGCGGCGGACAACAAGGTCAACCCGGATTTGGTGGGCAAGGT
GGTGGCCAGCCTCAGATGGGATACGGGGGCGGCTTTGGTCGGGGTCGCGG
GAGAAGGTGGTAAGATGACTTCAATATTATTACCGAAGCACCAGCAGACG
CACCCCCTCCGGAAGTATGATGATGGAAGACGAAGATGATGATTTTTATG
ACCCCGCCGATGCGGTGCCTGTAACTCAGCATCAAAACGGGTCTCAGCAT
CCCCAGGCAGATTCAGGACCCCACGACGCCAATGATGCGGAAGAGGAGGA
GATAGAGGTGGAAGAAGATGAGCCCACATCCTCGTCACGCCAGCCTCCGC
GCGGAGTCTCAAAGACCCTCCTCTGCAGATGTCTCTACGATATCAAAATC
AATAACACCCACCGTTACCCCCAAACTTGAATCTGCTACCCCTGTGCCTG
CTACTGCAAGGCCTACGGTCCCTCAGAAGCCCGGTTCCGCCTACCCTCCA
GTCCATGCGTCGAATATCGATGTCCACGCGAACCCTATCCATCCGGCGAC
CGGTAAACCAATCATGTCAACAGACATGGACACCGACTTCCCAGAGGATG
ACAAGCCTTGGAGGCGGCCAGGCTCCGACATTACGGATTATTTCAACTAC
GGGTTTGACGAGTTCACGTGGGCCAGCTATGTGTTGAAGCAACAGGAGCT
ACGCAAGGAAATTGGAGATCAGAAGAAACAATTGGATGATATGCAAGCCT
TCTTAAGCATGGGGCTCCCGCCAATGCCCGGAGGTCCTCCGGGACCAGGA
GGACCTCCAGGAAGCGCACCGCCTCCTATGCCCGGCATGCCTGGGATGCC
GGATATGTCACAAGAGATGATGCAAGGCATGCTGACGAGCATGATGTCAC
AAGGCCTGGACCCCTCATCCATGGATCCTATGGCATTTATGCAGCATGCG
CAGGCCATGATGGGTGGACAACCCGGCGCAGGCGGCGGACAACAAGGTCA
ACCCGGATTTGGTGGGCAAGGTGGTGGCCAGCCTCAGATGGGATACGGGG
GCGGCTTTGGTCGGGGTCGCGGGAGAAGGTGGTAAGATGACTTCAATATT
ATTACCGAAGCACCAGCAGACGCACCCCCTCCGGAAGTATGATGATGGAA
GACGAAGATGATGATTTTTATGACCCCGCCGATGCGGTGCCTGTAACTCA
GCATCAAAACGGGTCTCAGCATCCCCAGGCAGATTCAGGACCCCACGACG
CCAATGATGCGGAAGAGGAGGAGATAGAGGTGGAAGAAGATGAGCCCACA
TCCTCGTCACGCCAGCCTCCGCGCGGAGTCTCAAAGACCCTCCTCTGCAG
ATGTCTCTACGATATCAAAATCAATAACACCCACCGTTACCCCCAAACTT
GAATCTGCTACCCCTGTGCCTGCTACTGCAAGGCCTACGGTCCCTCAGAA
GCCCGGTTCCGCCTACCCTCCAGTCCATGCGTCGAATATCGATGTCCACG
CGAACCCTATCCATCCGGCGACCGGTAAACCAATCATGTCAACAGACATG
GACACCGACTTCCCAGAGGATGACAAGCCTTGGAGGCGGCCAGGCTCCGA
CATTACGGATTATTTCAACTACGGGTTTGACGAGTTCACGTGGGCCAGCT
ATGTGTTGAAGCAACAGGAGCTACGCAAGGAAATTGGAGATCAGAAGAAA
CAATTGGATGATATGCAAGCCTTCTTAAGCATGGGGCTCCCGCCAATGCC
CGGAGGTCCTCCGGGACCAGGAGGACCTCCAGGAAGCGCACCGCCTCCTA
TGCCCGGCATGCCTGGGATGCCGGATATGTCACAAGAGATGATGCAAGGC
ATGCTGACGAGCATGATGTCACAAGGCCTGGACCCCTCATCCATGGATCC
TATGGCATTTATGCAGCATGCGCAGGCCATGATGGGTGGACAACCCGGCG
CAGGCGGCGGACAACAAGGTCAACCCGGATTTGGTGGGCAAGGTGGTGGC
CAGCCTCAGATGGGATACGGGGGCGGCTTTGGTCGGGGTCGCGGGAGAAG
GTGGTAAGATGACTTCAATATTATTACCGAAGCACCAGCAGACGCACCCC
CTCCGGAAGTATGATGATGGAAGACGAAGATGATGATTTTTATGACCCCG
CCGATGCGGTGCCTGTAACTCAGCATCAAAACGGGTCTCAGCATCCCCAG
GCAGATTCAGGACCCCACGACGCCAATGATGCGGAAGAGGAGGAGATAGA
GGTGGAAGAAGATGAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09264OAU |
| DBxref | InterPro:IPR007854 |
| DBxref | PFAM:PF05182 |
| Product | cleavage polyadenylation factor subunit fip1 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An11 | supercontig | An11:149454..150533 - |
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