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Sequences
The following sequences are available for this feature:
mRNA from alignment at An11:585090..587197- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_006695-T1 ID=CBS51388_006695-T1|Name=CBS51388_006695-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2108bp|location=Sequence derived from alignment at An11:585090..587197- (Aspergillus niger CBS 513.88)
ATGGTTCTTATAGCGCCCATCGTGAATGGAATTTTGATCGTATCTCTGGA
GAAGTTTCTTCCGATCAGTCCGTCGCCTGCCCTCACCTTGTTAGTATGGG
GCAAATTTATAGTTGAAACGTAATGCAGGTGAGTGCTTTGAAGAAAGGAT
AATGCCACCCTGTCGCTTAGACCAGAGCTAGCATTATCAGTTGACAGGCT
TTGGCGCGCCTGCTTGCAACCACTATCGCCATGTTGCTGATGCTGCCGCC
CAAGTGTCCACCGGGTATTTATTTTCGAGTAACAGACACGTGACGTAATT
GCCTAAAGGGGAAGAAATGAGCGTTACTGCTGGACATCACGGTTTGGATC
AAACTTATCTGAAGTACTCCGTCCTTAAGTTGATTCTAACCTTATTTCTA
CATTAGTTTCGCATAAATTCGCTAGTCTTCATATTGAATAATCAAGCCCC
TCACCTGCACCCTTTATATTTGATTGGACTTCCTCACGCGTGGAACACGT
GAACACGTGATAACGTGTTTCTGTATACCTGCGGGTCTACAACTTGAAAC
GTTCGCGCTGTTGACCTGACGATTATAATGACTGGAACGAGCACTACAGG
AGATAGTGGAGTATTGAAAGAGGCAGTAACGCCCCTTTTCCAAGGGAAGC
AGTTCTGGTTGTCTCACAACATCCCCCAACGGAAGTGGTTCAAGGAATTA
ATCGAGGTACTACAACTATACATGGCTTTTAAGAACGCGTGACTAATTTA
TCTATGGAAAAACGGCGGTACTATACGGCTGCTGGAGAAGGATGCAGATA
TCAGATTGGTTGATCATAAGAGAAAGAACTTACCCTCTGACACGTGAGGT
TTCCTGCCATTTCCATCCTTGACTCACTTGTGTAATCGCATCGCTGGAAA
ACAGCGCACACTGTTTTAGCCTTCTACCATCCAGTGGACACTTACAGGAT
ATAGGTACTCTTTCAAATATGTCGAAGACTCACACCGCCTGGGGAAGCTG
CAGAATCTAGAGAATTATAGAGCCGGGCCTTCTGAAGCACGGCCCGTAGG
GGCTACCAACATTCCCACCAGAGGTCATAAGATCCCCTATACTCTCGAAG
ATGACCAGTTGCTCTGGGACTGGATGCAACCCCACGAGAGAAACCCTAAG
GCTTCCATTAGAGGCAACAAAATCTATCAAGAGCTAGCCGAGAAGGTATC
GAGAACCCCCTCTGAGCTGTGAAATGCAGGCATACTAAGCGTCATCCCAC
TAGCATCCAAGGCACACGTATCAATCATATCGAGATCGGTACCTCAAAAG
GCTCAAGGGACATCCACGTCCTGGTGGTATGCCAGAATCAACTGATCAAC
CTGCGCCTGATGGGCCCTCCAATTTAGCTACTCGCCTGGTCCAGTCTGAG
CCTCGAGGAGGGTCTGCACAAGGGGTTGAGCCTACTGCCATGCAAGCAAA
TGACAAGAAAAGGAAACGGGCTTCGGAGGATACTCCTGGGGAAGGCAATG
TAGACAGTACTAATAAGCCAAGTTTGAAGAAAAGAGTCACCGAAGTCAAT
ATCGACCTTCCAGACCCTTTCATCTCCGGACCTCAAACGAAACTGGCTGC
AGTACCACATTCAGCGACAGCATCCAACGGTCAGCGACCAACTCCTGGGG
CAAAAGAGGCGAGAGAACGCGGGGCCACTGAAGGATCGAAAGCTCCAGCC
AAGGAGCCACGCCAGCCTTCGCAGCCAGACCCCCTGTTTCTAGAGCTGCC
ATTTTTGCCTTCTGACGATGAGCCTGAAGAGGAAGATATGGAGCAGGATA
TCGACGCATGGATCGACGAGCGACTTCTTAACGGAAAGGCTCAGCATGAA
GAACAAATACACCTGGCACTGCGGTGCACCAGCATGGATCCAGATTTAGC
TGACAGGGTCCTGGCTATCCTAGTAGAAGGAAAACCTATACCGGATGATA
TGCCTGGTGTTTGGACACCTGAAGATGACAAATGCATAGAAGGAAACGAG
ACTCGAGGCATCCAACGAGTCATGGAGAAGCATGGTACGGAGGCCTTCAA
CAATCGCTGGGAGTACCTCAGCATGGTCAGAGAGGCCGGTCTTTTAGATA
CCCTTTGA back to topCoding sequence (CDS) from alignment at An11:585090..587197- >CBS51388_006695-T1 ID=CBS51388_006695-T1|Name=CBS51388_006695-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3555bp|location=Sequence derived from alignment at An11:585090..587197- (Aspergillus niger CBS 513.88)
CATCCAAGGCACACGTATCAATCATATCGAGATCGGTACCTCAAAAGGCT
CAAGGGACATCCACGTCCTGGTGGTATGCCAGAATCAACTGATCAACCTG
CGCCTGATGGGCCCTCCAATTTAGCTACTCGCCTGGTCCAGTCTGAGCCT
CGAGGAGGGTCTGCACAAGGGGTTGAGCCTACTGCCATGCAAGCAAATGA
CAAGAAAAGGAAACGGGCTTCGGAGGATACTCCTGGGGAAGGCAATGTAG
ACAGTACTAATAAGCCAAGTTTGAAGAAAAGAGTCACCGAAGTCAATATC
GACCTTCCAGACCCTTTCATCTCCGGACCTCAAACGAAACTGGCTGCAGT
ACCACATTCAGCGACAGCATCCAACGGTCAGCGACCAACTCCTGGGGCAA
AAGAGGCGAGAGAACGCGGGGCCACTGAAGGATCGAAAGCTCCAGCCAAG
GAGCCACGCCAGCCTTCGCAGCCAGACCCCCTGTTTCTAGAGCTGCCATT
TTTGCCTTCTGACGATGAGCCTGAAGAGGAAGATATGGAGCAGGATATCG
ACGCATGGATCGACGAGCGACTTCTTAACGGAAAGGCTCAGCATGAAGAA
CAAATACACCTGGCACTGCGGTGCACCAGCATGGATCCAGATTTAGCTGA
CAGGGTCCTGGCTATCCTAGTAGAAGGAAAACCTATACCGGATGATATGC
CTGGTGTTTGGACACCTGAAGATGACAAATGCATAGAAGGAAACGAGACT
CGAGGCATCCAACGAGTCATGGAGAAGCATGGTACGGAGGCCTTCAACAA
TCGCTGGGAGTACCTCAGCATGGTCAGAGAGGCCGGTCTTTTAGATACCC
TTTGAGTACTCTTTCAAATATGTCGAAGACTCACACCGCCTGGGGAAGCT
GCAGAATCTAGAGAATTATAGAGCCGGGCCTTCTGAAGCACGGCCCGTAG
GGGCTACCAACATTCCCACCAGAGGTCATAAGATCCCCTATACTCTCGAA
GATGACCAGTTGCTCTGGGACTGGATGCAACCCCACGAGAGAAACCCTAA
GGCTTCCATTAGAGGCAACAAAATCTATCAAGAGCTAGCCGAGAAGATGG
TTCTTATAGCGCCCATCGTGAATGGAATTTTGATCGTATCTCTGGAGAAG
TTTCTTCCGATCAGTCCGTCGCCTGCCCTCACCTTCATCCAAGGCACACG
TATCAATCATATCGAGATCGGTACCTCAAAAGGCTCAAGGGACATCCACG
TCCTGGTGGTATGCCAGAATCAACTGATCAACCTGCGCCTGATGGGCCCT
CCAATTTAGCTACTCGCCTGGTCCAGTCTGAGCCTCGAGGAGGGTCTGCA
CAAGGGGTTGAGCCTACTGCCATGCAAGCAAATGACAAGAAAAGGAAACG
GGCTTCGGAGGATACTCCTGGGGAAGGCAATGTAGACAGTACTAATAAGC
CAAGTTTGAAGAAAAGAGTCACCGAAGTCAATATCGACCTTCCAGACCCT
TTCATCTCCGGACCTCAAACGAAACTGGCTGCAGTACCACATTCAGCGAC
AGCATCCAACGGTCAGCGACCAACTCCTGGGGCAAAAGAGGCGAGAGAAC
GCGGGGCCACTGAAGGATCGAAAGCTCCAGCCAAGGAGCCACGCCAGCCT
TCGCAGCCAGACCCCCTGTTTCTAGAGCTGCCATTTTTGCCTTCTGACGA
TGAGCCTGAAGAGGAAGATATGGAGCAGGATATCGACGCATGGATCGACG
AGCGACTTCTTAACGGAAAGGCTCAGCATGAAGAACAAATACACCTGGCA
CTGCGGTGCACCAGCATGGATCCAGATTTAGCTGACAGGGTCCTGGCTAT
CCTAGTAGAAGGAAAACCTATACCGGATGATATGCCTGGTGTTTGGACAC
CTGAAGATGACAAATGCATAGAAGGAAACGAGACTCGAGGCATCCAACGA
GTCATGGAGAAGCATGGTACGGAGGCCTTCAACAATCGCTGGGAGTACCT
CAGCATGGTCAGAGAGGCCGGTCTTTTAGATACCCTTTGAGTACTCTTTC
AAATATGTCGAAGACTCACACCGCCTGGGGAAGCTGCAGAATCTAGAGAA
TTATAGAGCCGGGCCTTCTGAAGCACGGCCCGTAGGGGCTACCAACATTC
CCACCAGAGGTCATAAGATCCCCTATACTCTCGAAGATGACCAGTTGCTC
TGGGACTGGATGCAACCCCACGAGAGAAACCCTAAGGCTTCCATTAGAGG
CAACAAAATCTATCAAGAGCTAGCCGAGAAGATGGTTCTTATAGCGCCCA
TCGTGAATGGAATTTTGATCGTATCTCTGGAGAAGTTTCTTCCGATCAGT
CCGTCGCCTGCCCTCACCTTCATCCAAGGCACACGTATCAATCATATCGA
GATCGGTACCTCAAAAGGCTCAAGGGACATCCACGTCCTGGTGGTATGCC
AGAATCAACTGATCAACCTGCGCCTGATGGGCCCTCCAATTTAGCTACTC
GCCTGGTCCAGTCTGAGCCTCGAGGAGGGTCTGCACAAGGGGTTGAGCCT
ACTGCCATGCAAGCAAATGACAAGAAAAGGAAACGGGCTTCGGAGGATAC
TCCTGGGGAAGGCAATGTAGACAGTACTAATAAGCCAAGTTTGAAGAAAA
GAGTCACCGAAGTCAATATCGACCTTCCAGACCCTTTCATCTCCGGACCT
CAAACGAAACTGGCTGCAGTACCACATTCAGCGACAGCATCCAACGGTCA
GCGACCAACTCCTGGGGCAAAAGAGGCGAGAGAACGCGGGGCCACTGAAG
GATCGAAAGCTCCAGCCAAGGAGCCACGCCAGCCTTCGCAGCCAGACCCC
CTGTTTCTAGAGCTGCCATTTTTGCCTTCTGACGATGAGCCTGAAGAGGA
AGATATGGAGCAGGATATCGACGCATGGATCGACGAGCGACTTCTTAACG
GAAAGGCTCAGCATGAAGAACAAATACACCTGGCACTGCGGTGCACCAGC
ATGGATCCAGATTTAGCTGACAGGGTCCTGGCTATCCTAGTAGAAGGAAA
ACCTATACCGGATGATATGCCTGGTGTTTGGACACCTGAAGATGACAAAT
GCATAGAAGGAAACGAGACTCGAGGCATCCAACGAGTCATGGAGAAGCAT
GGTACGGAGGCCTTCAACAATCGCTGGGAGTACCTCAGCATGGTCAGAGA
GGCCGGTCTTTTAGATACCCTTTGAGTACTCTTTCAAATATGTCGAAGAC
TCACACCGCCTGGGGAAGCTGCAGAATCTAGAGAATTATAGAGCCGGGCC
TTCTGAAGCACGGCCCGTAGGGGCTACCAACATTCCCACCAGAGGTCATA
AGATCCCCTATACTCTCGAAGATGACCAGTTGCTCTGGGACTGGATGCAA
CCCCACGAGAGAAACCCTAAGGCTTCCATTAGAGGCAACAAAATCTATCA
AGAGCTAGCCGAGAAGATGGTTCTTATAGCGCCCATCGTGAATGGAATTT
TGATCGTATCTCTGGAGAAGTTTCTTCCGATCAGTCCGTCGCCTGCCCTC
ACCTT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003677 | DNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR009057 |
| DBxref | InterPro:IPR038104 |
| DBxref | InterPro:IPR021661 |
| DBxref | InterPro:IPR015010 |
| DBxref | PFAM:PF11626 |
| DBxref | PFAM:PF08914 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An11 | supercontig | An11:585090..587197 - |
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