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Sequences
The following sequences are available for this feature:
mRNA from alignment at An11:625915..627036+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_006712-T1 ID=CBS51388_006712-T1|Name=CBS51388_006712-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1122bp|location=Sequence derived from alignment at An11:625915..627036+ (Aspergillus niger CBS 513.88)
ATGGCGGCACTGCCGGACGTTGCCTCCATTCCCCTTCCTCTGGTGGCAAC
CCTGGGAATTGCCCCTCTAGTTTTCTATCTCGTCCTTGATAGATTTGGCC
CTTTGTGGCCAAACTCCAAAACTTTCTTGATTGGAAAGAAGAAGCCGGAG
ACCGTGACATCCTTTGAGTGCCCATATGCCTACATCCGGCAGATCTATGG
GAAGCATCACTGGAATCCATTCGTGCAGAAGCTGTCTCCAAGGCTTAAGG
ATGAGGATCCAGCCAAATATAAGATGGTTCTAGAGATAATGGATGCAATT
CACCTGTGTTTGATGCTAGTTGACGATGTATGTATACCGTGGGCCTATAT
AAATACACTCTAACATCAAGCAGATAACCGACAATAGCGACTACCGAAAA
GGCAAGCCAGCAGCTCACCGGATATATGGCCCTTCAGAGACAGCAAACCG
CGCTTACTACCGAGTCACCCAAATTCTCAATGAGACTGTGCAGCGGTTCC
CCAAGTTAGCCAAGTTCCTGCTACAAAATCTGGAAGAGATCCTCGAGGGC
CAAGACCTGTCACTGATCTGGCGACGAGATGGGCTGGGTAGCCTTTCGAC
CGTTCCCGAGGAGCGAGTTGCAGCCTACCGCAAAATGGCGTCATTGAAAA
CAGGGGCGCTATTCCGGCTGCTGGGGCAATTGGTGATGGAGGACCAATCG
ATGGACGGGACGATGACTACTCTTGCGTATGGCTCGCTTGGTTTATTGCA
TATCACACCAAGTCTAGCTGAAGCTGAAGCTGACCTTGAGATAGGTGGTG
CTCTCAGCTGCAGAACGATTGCAAAAATGTCTACTCATCCGAATATGCTA
AGGCCAAGGGAGCACTTGCAGAAGATCTGCGTAATCGAGAGCTCTCATAT
CCAATCATTCTCGCGCTGGAAGCCCCCGAAGGGCATTGGGTCGCCAGTGC
ATTGGAGACCAGCTCACCGCGCAATATCCGCAAGGCACTTGCCGTGATTC
AGAGCGAGAGAGTGCGCAATGCTTGTTTCAGGGAGCTCAAGTCGGCGAGT
GCTTCGGTCCAGGACTGGTTGGCTATCTGGGGACGGAACGAGAAGATGAA
TCTAAAGAGCCAGCAGACATAG back to topCoding sequence (CDS) from alignment at An11:625915..627036+ >CBS51388_006712-T1 ID=CBS51388_006712-T1|Name=CBS51388_006712-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3024bp|location=Sequence derived from alignment at An11:625915..627036+ (Aspergillus niger CBS 513.88)
ATGGCGGCACTGCCGGACGTTGCCTCCATTCCCCTTCCTCTGGTGGCAAC
CCTGGGAATTGCCCCTCTAGTTTTCTATCTCGTCCTTGATAGATTTGGCC
CTTTGTGGCCAAACTCCAAAACTTTCTTGATTGGAAAGAAGAAGCCGGAG
ACCGTGACATCCTTTGAGTGCCCATATGCCTACATCCGGCAGATCTATGG
GAAGCATCACTGGAATCCATTCGTGCAGAAGCTGTCTCCAAGGCTTAAGG
ATGAGGATCCAGCCAAATATAAGATGGTTCTAGAGATAATGGATGCAATT
CACCTGTGTTTGATGCTAGTTGACGATATAACCGACAATAGCGACTACCG
AAAAGGCAAGCCAGCAGCTCACCGGATATATGGCCCTTCAGAGACAGCAA
ACCGCGCTTACTACCGAGTCACCCAAATTCTCAATGAGACTGTGCAGCGG
TTCCCCAAGTTAGCCAAGTTCCTGCTACAAAATCTGGAAGAGATCCTCGA
GGGCCAAGACCTGTCACTGATCTGGCGACGAGATGGGCTGGGTAGCCTTT
CGACCGTTCCCGAGGAGCGAGTTGCAGCCTACCGCAAAATGGCGTCATTG
AAAACAGGGGCGCTATTCCGGCTGCTGGGGCAATTGGTGATGGAGGACCA
ATCGATGGACGGGACGATGACTACTCTTGCGTGGTGCTCTCAGCTGCAGA
ACGATTGCAAAAATGTCTACTCATCCGAATATGCTAAGGCCAAGGGAGCA
CTTGCAGAAGATCTGCGTAATCGAGAGCTCTCATATCCAATCATTCTCGC
GCTGGAAGCCCCCGAAGGGCATTGGGTCGCCAGTGCATTGGAGACCAGCT
CACCGCGCAATATCCGCAAGGCACTTGCCGTGATTCAGAGCGAGAGAGTG
CGCAATGCTTGTTTCAGGGAGCTCAAGTCGGCGAGTGCTTCGGTCCAGGA
CTGGTTGGCTATCTGGGGACGGAACGAGAAGATGAATCTAAAGAGCCAGC
AGACATAGATGGCGGCACTGCCGGACGTTGCCTCCATTCCCCTTCCTCTG
GTGGCAACCCTGGGAATTGCCCCTCTAGTTTTCTATCTCGTCCTTGATAG
ATTTGGCCCTTTGTGGCCAAACTCCAAAACTTTCTTGATTGGAAAGAAGA
AGCCGGAGACCGTGACATCCTTTGAGTGCCCATATGCCTACATCCGGCAG
ATCTATGGGAAGCATCACTGGAATCCATTCGTGCAGAAGCTGTCTCCAAG
GCTTAAGGATGAGGATCCAGCCAAATATAAGATGGTTCTAGAGATAATGG
ATGCAATTCACCTGTGTTTGATGCTAGTTGACGATATAACCGACAATAGC
GACTACCGAAAAGGCAAGCCAGCAGCTCACCGGATATATGGCCCTTCAGA
GACAGCAAACCGCGCTTACTACCGAGTCACCCAAATTCTCAATGAGACTG
TGCAGCGGTTCCCCAAGTTAGCCAAGTTCCTGCTACAAAATCTGGAAGAG
ATCCTCGAGGGCCAAGACCTGTCACTGATCTGGCGACGAGATGGGCTGGG
TAGCCTTTCGACCGTTCCCGAGGAGCGAGTTGCAGCCTACCGCAAAATGG
CGTCATTGAAAACAGGGGCGCTATTCCGGCTGCTGGGGCAATTGGTGATG
GAGGACCAATCGATGGACGGGACGATGACTACTCTTGCGTGGTGCTCTCA
GCTGCAGAACGATTGCAAAAATGTCTACTCATCCGAATATGCTAAGGCCA
AGGGAGCACTTGCAGAAGATCTGCGTAATCGAGAGCTCTCATATCCAATC
ATTCTCGCGCTGGAAGCCCCCGAAGGGCATTGGGTCGCCAGTGCATTGGA
GACCAGCTCACCGCGCAATATCCGCAAGGCACTTGCCGTGATTCAGAGCG
AGAGAGTGCGCAATGCTTGTTTCAGGGAGCTCAAGTCGGCGAGTGCTTCG
GTCCAGGACTGGTTGGCTATCTGGGGACGGAACGAGAAGATGAATCTAAA
GAGCCAGCAGACATAGATGGCGGCACTGCCGGACGTTGCCTCCATTCCCC
TTCCTCTGGTGGCAACCCTGGGAATTGCCCCTCTAGTTTTCTATCTCGTC
CTTGATAGATTTGGCCCTTTGTGGCCAAACTCCAAAACTTTCTTGATTGG
AAAGAAGAAGCCGGAGACCGTGACATCCTTTGAGTGCCCATATGCCTACA
TCCGGCAGATCTATGGGAAGCATCACTGGAATCCATTCGTGCAGAAGCTG
TCTCCAAGGCTTAAGGATGAGGATCCAGCCAAATATAAGATGGTTCTAGA
GATAATGGATGCAATTCACCTGTGTTTGATGCTAGTTGACGATATAACCG
ACAATAGCGACTACCGAAAAGGCAAGCCAGCAGCTCACCGGATATATGGC
CCTTCAGAGACAGCAAACCGCGCTTACTACCGAGTCACCCAAATTCTCAA
TGAGACTGTGCAGCGGTTCCCCAAGTTAGCCAAGTTCCTGCTACAAAATC
TGGAAGAGATCCTCGAGGGCCAAGACCTGTCACTGATCTGGCGACGAGAT
GGGCTGGGTAGCCTTTCGACCGTTCCCGAGGAGCGAGTTGCAGCCTACCG
CAAAATGGCGTCATTGAAAACAGGGGCGCTATTCCGGCTGCTGGGGCAAT
TGGTGATGGAGGACCAATCGATGGACGGGACGATGACTACTCTTGCGTGG
TGCTCTCAGCTGCAGAACGATTGCAAAAATGTCTACTCATCCGAATATGC
TAAGGCCAAGGGAGCACTTGCAGAAGATCTGCGTAATCGAGAGCTCTCAT
ATCCAATCATTCTCGCGCTGGAAGCCCCCGAAGGGCATTGGGTCGCCAGT
GCATTGGAGACCAGCTCACCGCGCAATATCCGCAAGGCACTTGCCGTGAT
TCAGAGCGAGAGAGTGCGCAATGCTTGTTTCAGGGAGCTCAAGTCGGCGA
GTGCTTCGGTCCAGGACTGGTTGGCTATCTGGGGACGGAACGAGAAGATG
AATCTAAAGAGCCAGCAGACATAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0008299 | isoprenoid biosynthetic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_11.4 |
| Note | SMCOG1182:Polyprenyl synthetase |
| DBxref | InterPro:IPR000092 |
| DBxref | InterPro:IPR008949 |
| DBxref | PFAM:PF00348 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An11 | supercontig | An11:625915..627036 + |
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