CBS51388_006732-T1, CBS51388_006732-T1 (mRNA) Aspergillus niger CBS 513.88

Overview


Name	CBS51388_006732-T1
Unique Name	CBS51388_006732-T1
Type	mRNA
Organism	Aspergillus niger CBS 513.88

Sequences

The following sequences are available for this feature:

mRNA from alignment at An11:704468..705920+
coding sequence from alignment at An11:704468..705920+

mRNA from alignment at An11:704468..705920+

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>CBS51388_006732-T1 ID=CBS51388_006732-T1|Name=CBS51388_006732-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1453bp|location=Sequence derived from alignment at An11:704468..705920+ (Aspergillus niger CBS 513.88)
ATGCCTCTCGGAATTCACAATCCGTTACCTTCATCGTTAGGAAGTATGTT
CCGCGCCGTTTTCGTTCCAATTTCCCCGCAATTCTCTTAAACAGGTGGTT
CGGCTGCGACTAACAATCAGACAGGCGAATGTAGAAAGGCGGGCAAAATC
CTCGCCTCCTTTGTCGATCCACGACAAGCGTTTGGGCCCGATAAAGTGAT
TCCTCCGGAGATTTTGGCAGGAGCCAAGGTAATTAGCAAATTCAATACTG
AGCCTGTTGCTCGAAAGTCGCACCGTCGCTCACGGTTTCTTCCCTAGGGT
CTCGCCGTTCTTACTGTCCTGAAAGCTGGATTTTTGGGCTCAGCTCGGTT
CGGTTCTGGTGTCGTCGTCGCTCGACTAGCTGATGGAACCTGGTCTGCTC
CGTCGGCCATTGCCACTGCTGGTGCTGGGTTCGGAGGTCAGATTGGGTTT
GAGTTAACCGACTTTGTGTTTATCTTGAACGATGCCGCAGCCGTCCGGAC
CTTCTCGCAGGTCGGGACCCTGACGCTAGGTGGAAACGTTTCGATCGCTG
CTGGACCGGTCGGACGAAACGCGGAAGCTGCTGGTGCGGCTAGCACAAAG
GGTGTGGCGGCAGTGTTCTCATACTCCAAGACCAAGGGTCTCTTTGCCGG
TGTCAGTCTGGAGGGAAGCATGCTGGTGGAACGTAAGGATGCGAACGAGA
AGATGTACAACAGCCGGGTTTCGGCACGCCAGCTCCTCAGCGGAACCATT
CGACCTCCCCCGGGCGCGGATCCTCTCCTGACCGTATTGAACTCGCGTGC
GTTCTACGGCAATTCCCGGAATGGTAGTGATATGTACAACGACATCCCCG
TTTATGATGACAGCCATGACGATGTGGTTTGGGAGGGCCGCAGGGGCGAG
GCGTACGGCGAAGGAACGCGGCGCGACCGCACTGGGTTCAGTGGCTCAGG
TTCAGATGACTTCCGGGACCGGCCCCGCCGTGCGAATACATGGGCAGACG
ATATATATGATCGACCTGCTGGAGGGTTGAGCCGTTCATCGACTACTCGG
TACAGCGGTCGCACCGACAATTACGACTCCTTCAACCGCAGCCGGAGCAA
TACCACCCCAATCGACGAGGACTATGTATATTCTGACCGCAAGCCTAGCC
GACCCACAGCTCCAAAACCGGTGTTTGGACAGCGGACCGGGGCGGCTCCT
GCTCTACGCCAGGACCAGGCCATAGCACTGTACACCTTTGATGCGGACCA
GGAAGGTGACTTGGGTTTCAAGAAAGGAGACATCATTACCATCCTCAAGA
GGACTGACAAGAAAGAGGACTGGTGGACCGGGCGGATCGGGAGTCGCGTT
GGCATTTTCCCAAGGTAAGCAGGCCCGCGTTTCGCAGAAACCATGTCTTC
CTCGGCCATGAAACTAATCATTGCTATTCAGTAACTATGTCGAAACTGCT
TAG

Coding sequence (CDS) from alignment at An11:704468..705920+

>CBS51388_006732-T1 ID=CBS51388_006732-T1|Name=CBS51388_006732-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4944bp|location=Sequence derived from alignment at An11:704468..705920+ (Aspergillus niger CBS 513.88)
ATGCCTCTCGGAATTCACAATCCGTTACCTTCATCGTTAGGAAGCGAATG
TAGAAAGGCGGGCAAAATCCTCGCCTCCTTTGTCGATCCACGACAAGCGT
TTGGGCCCGATAAAGTGATTCCTCCGGAGATTTTGGCAGGAGCCAAGGGT
CTCGCCGTTCTTACTGTCCTGAAAGCTGGATTTTTGGGCTCAGCTCGGTT
CGGTTCTGGTGTCGTCGTCGCTCGACTAGCTGATGGAACCTGGTCTGCTC
CGTCGGCCATTGCCACTGCTGGTGCTGGGTTCGGAGGTCAGATTGGGTTT
GAGTTAACCGACTTTGTGTTTATCTTGAACGATGCCGCAGCCGTCCGGAC
CTTCTCGCAGGTCGGGACCCTGACGCTAGGTGGAAACGTTTCGATCGCTG
CTGGACCGGTCGGACGAAACGCGGAAGCTGCTGGTGCGGCTAGCACAAAG
GGTGTGGCGGCAGTGTTCTCATACTCCAAGACCAAGGGTCTCTTTGCCGG
TGTCAGTCTGGAGGGAAGCATGCTGGTGGAACGTAAGGATGCGAACGAGA
AGATGTACAACAGCCGGGTTTCGGCACGCCAGCTCCTCAGCGGAACCATT
CGACCTCCCCCGGGCGCGGATCCTCTCCTGACCGTATTGAACTCGCGTGC
GTTCTACGGCAATTCCCGGAATGGTAGTGATATGTACAACGACATCCCCG
TTTATGATGACAGCCATGACGATGTGGTTTGGGAGGGCCGCAGGGGCGAG
GCGTACGGCGAAGGAACGCGGCGCGACCGCACTGGGTTCAGTGGCTCAGG
TTCAGATGACTTCCGGGACCGGCCCCGCCGTGCGAATACATGGGCAGACG
ATATATATGATCGACCTGCTGGAGGGTTGAGCCGTTCATCGACTACTCGG
TACAGCGGTCGCACCGACAATTACGACTCCTTCAACCGCAGCCGGAGCAA
TACCACCCCAATCGACGAGGACTATGTATATTCTGACCGCAAGCCTAGCC
GACCCACAGCTCCAAAACCGGTGTTTGGACAGCGGACCGGGGCGGCTCCT
GCTCTACGCCAGGACCAGGCCATAGCACTGTACACCTTTGATGCGGACCA
GGAAGGTGACTTGGGTTTCAAGAAAGGAGACATCATTACCATCCTCAAGA
GGACTGACAAGAAAGAGGACTGGTGGACCGGGCGGATCGGGAGTCGCGTT
GGCATTTTCCCAAGTAACTATGTCGAAACTGCTTAGATGCCTCTCGGAAT
TCACAATCCGTTACCTTCATCGTTAGGAAGCGAATGTAGAAAGGCGGGCA
AAATCCTCGCCTCCTTTGTCGATCCACGACAAGCGTTTGGGCCCGATAAA
GTGATTCCTCCGGAGATTTTGGCAGGAGCCAAGGGTCTCGCCGTTCTTAC
TGTCCTGAAAGCTGGATTTTTGGGCTCAGCTCGGTTCGGTTCTGGTGTCG
TCGTCGCTCGACTAGCTGATGGAACCTGGTCTGCTCCGTCGGCCATTGCC
ACTGCTGGTGCTGGGTTCGGAGGTCAGATTGGGTTTGAGTTAACCGACTT
TGTGTTTATCTTGAACGATGCCGCAGCCGTCCGGACCTTCTCGCAGGTCG
GGACCCTGACGCTAGGTGGAAACGTTTCGATCGCTGCTGGACCGGTCGGA
CGAAACGCGGAAGCTGCTGGTGCGGCTAGCACAAAGGGTGTGGCGGCAGT
GTTCTCATACTCCAAGACCAAGGGTCTCTTTGCCGGTGTCAGTCTGGAGG
GAAGCATGCTGGTGGAACGTAAGGATGCGAACGAGAAGATGTACAACAGC
CGGGTTTCGGCACGCCAGCTCCTCAGCGGAACCATTCGACCTCCCCCGGG
CGCGGATCCTCTCCTGACCGTATTGAACTCGCGTGCGTTCTACGGCAATT
CCCGGAATGGTAGTGATATGTACAACGACATCCCCGTTTATGATGACAGC
CATGACGATGTGGTTTGGGAGGGCCGCAGGGGCGAGGCGTACGGCGAAGG
AACGCGGCGCGACCGCACTGGGTTCAGTGGCTCAGGTTCAGATGACTTCC
GGGACCGGCCCCGCCGTGCGAATACATGGGCAGACGATATATATGATCGA
CCTGCTGGAGGGTTGAGCCGTTCATCGACTACTCGGTACAGCGGTCGCAC
CGACAATTACGACTCCTTCAACCGCAGCCGGAGCAATACCACCCCAATCG
ACGAGGACTATGTATATTCTGACCGCAAGCCTAGCCGACCCACAGCTCCA
AAACCGGTGTTTGGACAGCGGACCGGGGCGGCTCCTGCTCTACGCCAGGA
CCAGGCCATAGCACTGTACACCTTTGATGCGGACCAGGAAGGTGACTTGG
GTTTCAAGAAAGGAGACATCATTACCATCCTCAAGAGGACTGACAAGAAA
GAGGACTGGTGGACCGGGCGGATCGGGAGTCGCGTTGGCATTTTCCCAAG
TAACTATGTCGAAACTGCTTAGATGCCTCTCGGAATTCACAATCCGTTAC
CTTCATCGTTAGGAAGCGAATGTAGAAAGGCGGGCAAAATCCTCGCCTCC
TTTGTCGATCCACGACAAGCGTTTGGGCCCGATAAAGTGATTCCTCCGGA
GATTTTGGCAGGAGCCAAGGGTCTCGCCGTTCTTACTGTCCTGAAAGCTG
GATTTTTGGGCTCAGCTCGGTTCGGTTCTGGTGTCGTCGTCGCTCGACTA
GCTGATGGAACCTGGTCTGCTCCGTCGGCCATTGCCACTGCTGGTGCTGG
GTTCGGAGGTCAGATTGGGTTTGAGTTAACCGACTTTGTGTTTATCTTGA
ACGATGCCGCAGCCGTCCGGACCTTCTCGCAGGTCGGGACCCTGACGCTA
GGTGGAAACGTTTCGATCGCTGCTGGACCGGTCGGACGAAACGCGGAAGC
TGCTGGTGCGGCTAGCACAAAGGGTGTGGCGGCAGTGTTCTCATACTCCA
AGACCAAGGGTCTCTTTGCCGGTGTCAGTCTGGAGGGAAGCATGCTGGTG
GAACGTAAGGATGCGAACGAGAAGATGTACAACAGCCGGGTTTCGGCACG
CCAGCTCCTCAGCGGAACCATTCGACCTCCCCCGGGCGCGGATCCTCTCC
TGACCGTATTGAACTCGCGTGCGTTCTACGGCAATTCCCGGAATGGTAGT
GATATGTACAACGACATCCCCGTTTATGATGACAGCCATGACGATGTGGT
TTGGGAGGGCCGCAGGGGCGAGGCGTACGGCGAAGGAACGCGGCGCGACC
GCACTGGGTTCAGTGGCTCAGGTTCAGATGACTTCCGGGACCGGCCCCGC
CGTGCGAATACATGGGCAGACGATATATATGATCGACCTGCTGGAGGGTT
GAGCCGTTCATCGACTACTCGGTACAGCGGTCGCACCGACAATTACGACT
CCTTCAACCGCAGCCGGAGCAATACCACCCCAATCGACGAGGACTATGTA
TATTCTGACCGCAAGCCTAGCCGACCCACAGCTCCAAAACCGGTGTTTGG
ACAGCGGACCGGGGCGGCTCCTGCTCTACGCCAGGACCAGGCCATAGCAC
TGTACACCTTTGATGCGGACCAGGAAGGTGACTTGGGTTTCAAGAAAGGA
GACATCATTACCATCCTCAAGAGGACTGACAAGAAAGAGGACTGGTGGAC
CGGGCGGATCGGGAGTCGCGTTGGCATTTTCCCAAGTAACTATGTCGAAA
CTGCTTAGATGCCTCTCGGAATTCACAATCCGTTACCTTCATCGTTAGGA
AGCGAATGTAGAAAGGCGGGCAAAATCCTCGCCTCCTTTGTCGATCCACG
ACAAGCGTTTGGGCCCGATAAAGTGATTCCTCCGGAGATTTTGGCAGGAG
CCAAGGGTCTCGCCGTTCTTACTGTCCTGAAAGCTGGATTTTTGGGCTCA
GCTCGGTTCGGTTCTGGTGTCGTCGTCGCTCGACTAGCTGATGGAACCTG
GTCTGCTCCGTCGGCCATTGCCACTGCTGGTGCTGGGTTCGGAGGTCAGA
TTGGGTTTGAGTTAACCGACTTTGTGTTTATCTTGAACGATGCCGCAGCC
GTCCGGACCTTCTCGCAGGTCGGGACCCTGACGCTAGGTGGAAACGTTTC
GATCGCTGCTGGACCGGTCGGACGAAACGCGGAAGCTGCTGGTGCGGCTA
GCACAAAGGGTGTGGCGGCAGTGTTCTCATACTCCAAGACCAAGGGTCTC
TTTGCCGGTGTCAGTCTGGAGGGAAGCATGCTGGTGGAACGTAAGGATGC
GAACGAGAAGATGTACAACAGCCGGGTTTCGGCACGCCAGCTCCTCAGCG
GAACCATTCGACCTCCCCCGGGCGCGGATCCTCTCCTGACCGTATTGAAC
TCGCGTGCGTTCTACGGCAATTCCCGGAATGGTAGTGATATGTACAACGA
CATCCCCGTTTATGATGACAGCCATGACGATGTGGTTTGGGAGGGCCGCA
GGGGCGAGGCGTACGGCGAAGGAACGCGGCGCGACCGCACTGGGTTCAGT
GGCTCAGGTTCAGATGACTTCCGGGACCGGCCCCGCCGTGCGAATACATG
GGCAGACGATATATATGATCGACCTGCTGGAGGGTTGAGCCGTTCATCGA
CTACTCGGTACAGCGGTCGCACCGACAATTACGACTCCTTCAACCGCAGC
CGGAGCAATACCACCCCAATCGACGAGGACTATGTATATTCTGACCGCAA
GCCTAGCCGACCCACAGCTCCAAAACCGGTGTTTGGACAGCGGACCGGGG
CGGCTCCTGCTCTACGCCAGGACCAGGCCATAGCACTGTACACCTTTGAT
GCGGACCAGGAAGGTGACTTGGGTTTCAAGAAAGGAGACATCATTACCAT
CCTCAAGAGGACTGACAAGAAAGAGGACTGGTGGACCGGGCGGATCGGGA
GTCGCGTTGGCATTTTCCCAAGTAACTATGTCGAAACTGCTTAG

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
CBS51388_006732	CBS51388_006732	Aspergillus niger CBS 513.88	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CBS51388_006732-T1.exon1	CBS51388_006732-T1.exon1	Aspergillus niger CBS 513.88	exon
CBS51388_006732-T1.exon2	CBS51388_006732-T1.exon2	Aspergillus niger CBS 513.88	exon
CBS51388_006732-T1.exon3	CBS51388_006732-T1.exon3	Aspergillus niger CBS 513.88	exon
CBS51388_006732-T1.exon4	CBS51388_006732-T1.exon4	Aspergillus niger CBS 513.88	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CBS51388_006732-T1.cds	CBS51388_006732-T1.cds	Aspergillus niger CBS 513.88	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
CBS51388_006732-T1	CBS51388_006732-T1-protein	Aspergillus niger CBS 513.88	polypeptide

Properties


Property Name	Value
DBxref	InterPro:IPR036028
DBxref	InterPro:IPR033643
DBxref	InterPro:IPR007461
DBxref	InterPro:IPR001452
DBxref	PFAM:PF04366
DBxref	PFAM:PF14604
DBxref	PFAM:PF07653
DBxref	PFAM:PF00018
Product	hypothetical protein

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Aspergillus niger CBS 513.88 whole genome analysis	2021-11-01

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
An11	supercontig	An11:704468..705920 +

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CBS51388_006732-T1, CBS51388_006732-T1 (mRNA) Aspergillus niger CBS 513.88

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CBS51388_006732-T1, CBS51388_006732-T1 (mRNA) Aspergillus niger CBS 513.88