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CBS51388_006970-T1, CBS51388_006970-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_006970-T1
Unique NameCBS51388_006970-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An11:1425974..1426898-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_006970-T1 ID=CBS51388_006970-T1|Name=CBS51388_006970-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=925bp|location=Sequence derived from alignment at An11:1425974..1426898- (Aspergillus niger CBS 513.88)
ATGTCAAACATTCTCGTTACTGGCAGTTCCCGTGGGCTAGGATTAGAGTT
AGTGAGGCAGTTAGCTGCCCGCGCCAGCCTCGAAGGAGGACTAGTTATCG
CAACGGCGCGAAAATGCAGTCCAGAACTCATGCAATTAATCACGCATTCT
GATGGATGCGTCGTGTTTGTCGCTTTGGATATATCTGACGCGTCAAGAAT
TGCCGAATCGGCTGAGGAAGTCAGATCAGCCTTGAACCAGCAAAGCCTAG
ACATGTTGATCAATTGCGCTGGCGTCCATAGTGAGACGCATGGAAAATTA
GCGCTAATGTAAGCCTGATGACCTTTGTTCCGTGGGTGTACTTCAAGCTG
ACACCAAACCGAAAGGTCGGACCTCGAATACCAATTGTCGGTGAATGTGA
CTGGAACGCATAACGTTCTTCGCCACTATCTTCCACTCATGCAGAGCAGC
AATGTCAAGAAAATCATCAATATGTGAGTATCATGCCAGAGGCCTGAACC
TCATTCCCTAGCGGACACTCATAATTCAAAACCACAGTTCGAGCGCATAT
GGTTCAATGACCAGTGCACGTGCAGTATCATACGCTCCTTGCCCAGCCTA
CAAGATCAGCATAGCAGCACTGAACGCTTTAACCGTCCAGTATGCGTTGT
CCTACGAAGAGGAAGGATTTATCTTCCTCTCAGTAAGTCCCGGCGTATGT
TACTACTCCCCGATCTACTGAAAGGCCAATGCCGGAGAAGCTAATAGGTC
ACCTCAGTGGCTACAAAGCGACATGGGTGGTAAAAATGCCGACCTGACCG
TGCCACAGGGTGCTGAAGCAGTCTTGAGCATTTCCCTGTCCGCCGAACGT
ACGGACAATGGTCGGTTCAAGAATATCAGCGTCCCAGGGTGGGAGGCTTA
TGATGGCCAGGATGTACCCTGGTAG
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Coding sequence (CDS) from alignment at An11:1425974..1426898-

>CBS51388_006970-T1 ID=CBS51388_006970-T1|Name=CBS51388_006970-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2916bp|location=Sequence derived from alignment at An11:1425974..1426898- (Aspergillus niger CBS 513.88)
TGGCTACAAAGCGACATGGGTGGTAAAAATGCCGACCTGACCGTGCCACA
GGGTGCTGAAGCAGTCTTGAGCATTTCCCTGTCCGCCGAACGTACGGACA
ATGGTCGGTTCAAGAATATCAGCGTCCCAGGGTGGGAGGCTTATGATGGC
CAGGATGTACCCTGGTAGTTCGAGCGCATATGGTTCAATGACCAGTGCAC
GTGCAGTATCATACGCTCCTTGCCCAGCCTACAAGATCAGCATAGCAGCA
CTGAACGCTTTAACCGTCCAGTATGCGTTGTCCTACGAAGAGGAAGGATT
TATCTTCCTCTCAGTCGGACCTCGAATACCAATTGTCGGTGAATGTGACT
GGAACGCATAACGTTCTTCGCCACTATCTTCCACTCATGCAGAGCAGCAA
TGTCAAGAAAATCATCAATATATGTCAAACATTCTCGTTACTGGCAGTTC
CCGTGGGCTAGGATTAGAGTTAGTGAGGCAGTTAGCTGCCCGCGCCAGCC
TCGAAGGAGGACTAGTTATCGCAACGGCGCGAAAATGCAGTCCAGAACTC
ATGCAATTAATCACGCATTCTGATGGATGCGTCGTGTTTGTCGCTTTGGA
TATATCTGACGCGTCAAGAATTGCCGAATCGGCTGAGGAAGTCAGATCAG
CCTTGAACCAGCAAAGCCTAGACATGTTGATCAATTGCGCTGGCGTCCAT
AGTGAGACGCATGGAAAATTAGCGCTAATTGGCTACAAAGCGACATGGGT
GGTAAAAATGCCGACCTGACCGTGCCACAGGGTGCTGAAGCAGTCTTGAG
CATTTCCCTGTCCGCCGAACGTACGGACAATGGTCGGTTCAAGAATATCA
GCGTCCCAGGGTGGGAGGCTTATGATGGCCAGGATGTACCCTGGTAGTTC
GAGCGCATATGGTTCAATGACCAGTGCACGTGCAGTATCATACGCTCCTT
GCCCAGCCTACAAGATCAGCATAGCAGCACTGAACGCTTTAACCGTCCAG
TATGCGTTGTCCTACGAAGAGGAAGGATTTATCTTCCTCTCAGTCGGACC
TCGAATACCAATTGTCGGTGAATGTGACTGGAACGCATAACGTTCTTCGC
CACTATCTTCCACTCATGCAGAGCAGCAATGTCAAGAAAATCATCAATAT
ATGTCAAACATTCTCGTTACTGGCAGTTCCCGTGGGCTAGGATTAGAGTT
AGTGAGGCAGTTAGCTGCCCGCGCCAGCCTCGAAGGAGGACTAGTTATCG
CAACGGCGCGAAAATGCAGTCCAGAACTCATGCAATTAATCACGCATTCT
GATGGATGCGTCGTGTTTGTCGCTTTGGATATATCTGACGCGTCAAGAAT
TGCCGAATCGGCTGAGGAAGTCAGATCAGCCTTGAACCAGCAAAGCCTAG
ACATGTTGATCAATTGCGCTGGCGTCCATAGTGAGACGCATGGAAAATTA
GCGCTAATTGGCTACAAAGCGACATGGGTGGTAAAAATGCCGACCTGACC
GTGCCACAGGGTGCTGAAGCAGTCTTGAGCATTTCCCTGTCCGCCGAACG
TACGGACAATGGTCGGTTCAAGAATATCAGCGTCCCAGGGTGGGAGGCTT
ATGATGGCCAGGATGTACCCTGGTAGTTCGAGCGCATATGGTTCAATGAC
CAGTGCACGTGCAGTATCATACGCTCCTTGCCCAGCCTACAAGATCAGCA
TAGCAGCACTGAACGCTTTAACCGTCCAGTATGCGTTGTCCTACGAAGAG
GAAGGATTTATCTTCCTCTCAGTCGGACCTCGAATACCAATTGTCGGTGA
ATGTGACTGGAACGCATAACGTTCTTCGCCACTATCTTCCACTCATGCAG
AGCAGCAATGTCAAGAAAATCATCAATATATGTCAAACATTCTCGTTACT
GGCAGTTCCCGTGGGCTAGGATTAGAGTTAGTGAGGCAGTTAGCTGCCCG
CGCCAGCCTCGAAGGAGGACTAGTTATCGCAACGGCGCGAAAATGCAGTC
CAGAACTCATGCAATTAATCACGCATTCTGATGGATGCGTCGTGTTTGTC
GCTTTGGATATATCTGACGCGTCAAGAATTGCCGAATCGGCTGAGGAAGT
CAGATCAGCCTTGAACCAGCAAAGCCTAGACATGTTGATCAATTGCGCTG
GCGTCCATAGTGAGACGCATGGAAAATTAGCGCTAATTGGCTACAAAGCG
ACATGGGTGGTAAAAATGCCGACCTGACCGTGCCACAGGGTGCTGAAGCA
GTCTTGAGCATTTCCCTGTCCGCCGAACGTACGGACAATGGTCGGTTCAA
GAATATCAGCGTCCCAGGGTGGGAGGCTTATGATGGCCAGGATGTACCCT
GGTAGTTCGAGCGCATATGGTTCAATGACCAGTGCACGTGCAGTATCATA
CGCTCCTTGCCCAGCCTACAAGATCAGCATAGCAGCACTGAACGCTTTAA
CCGTCCAGTATGCGTTGTCCTACGAAGAGGAAGGATTTATCTTCCTCTCA
GTCGGACCTCGAATACCAATTGTCGGTGAATGTGACTGGAACGCATAACG
TTCTTCGCCACTATCTTCCACTCATGCAGAGCAGCAATGTCAAGAAAATC
ATCAATATATGTCAAACATTCTCGTTACTGGCAGTTCCCGTGGGCTAGGA
TTAGAGTTAGTGAGGCAGTTAGCTGCCCGCGCCAGCCTCGAAGGAGGACT
AGTTATCGCAACGGCGCGAAAATGCAGTCCAGAACTCATGCAATTAATCA
CGCATTCTGATGGATGCGTCGTGTTTGTCGCTTTGGATATATCTGACGCG
TCAAGAATTGCCGAATCGGCTGAGGAAGTCAGATCAGCCTTGAACCAGCA
AAGCCTAGACATGTTGATCAATTGCGCTGGCGTCCATAGTGAGACGCATG
GAAAATTAGCGCTAAT
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_006970CBS51388_006970Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006970-T1CBS51388_006970-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006970-T1.cdsCBS51388_006970-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_006970-T1.exon4CBS51388_006970-T1.exon4Aspergillus niger CBS 513.88exon
CBS51388_006970-T1.exon3CBS51388_006970-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_006970-T1.exon2CBS51388_006970-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_006970-T1.exon1CBS51388_006970-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR002347
DBxrefPFAM:PF08659
DBxrefPFAM:PF01370
DBxrefPFAM:PF13561
DBxrefPFAM:PF00106
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An11supercontigAn11:1425974..1426898 -
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