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Sequences
The following sequences are available for this feature:
mRNA from alignment at An12:167287..168614- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_007453-T1 ID=CBS51388_007453-T1|Name=CBS51388_007453-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1328bp|location=Sequence derived from alignment at An12:167287..168614- (Aspergillus niger CBS 513.88)
ATGGCACTTAGAAGACCCCATCGCAAATCGCGCCACGGCTGCTTGCAATG
CAAGCGAAGGCGGGTGAAGGTATTCTCCTATTTCCGCAACCTTCTTGTGG
AATCCTCCCTGTGTCTCGTCTTACTTACTGACAATCCCAGTGTGATGAGT
TACGACCCTCCTGTTCAAATTGCTCAAAACGTCTAGCAACCTGCGAGTAT
GACTCCAGCTCATCACTGCTATGGACAAATGAAGAACCCCCTTCTCGCAC
ACGGTCCACGAAGTCTAGCCCAGCAGGAGCCTCCCAGTCTGACTCTGCTG
CGGCTACGACTGCCAACTCCCTCAACATCCTGGGAAGATGGGGTGATGCA
TTCGCCGCCTCGCAAGCAGTCCCCAGCTTGAACATCACAGACCTGGAGCT
GATGATGCAGTGGTGCAACTCAACGCACAAAAGTGTGTCTCGGGGCGAAC
ACACGGACCACATTTGGCGCTTTCGCGCTTCAGAGGAAGCAATCACGCAT
CCTTTCCTAATGCATGGGTTACTCGCGCTTTCCTCTCTGCATATTGCACG
AACAAAGCATGATACCCAGCAGCGTCCCATTTATCTCAGCACTGCAGTTG
CACATCAGGCTCAAGCACTGGCACTTTTCCGCGAGAGGCTAAGCGATATC
AACTCATCTAATGCAAGGGCTATGTTTGCATTCGCCAGTGTTGTGGTCTA
CTACACTTTTGGCTTACCTCACGCACCCGAGTCTAGCGATCCATGGGCAA
ACGTGGATGACCTGATTCAGATATTCACGCTCGCGCGCGGGGTTCAACAT
ATACTCAAGCAAGCTACTTCGGTCATAAAGAGCGATGAATGGAGCATGAT
TTTCAAGGTGGAAGACCTGAATGAGGACTACTTGAGAGACGCACAGTCAA
GCTTGGAGCGGTTGCATGAGGTGAACAACGCTTGCGGGGCTCAGGACGAC
ACCCATGACACAGCTGCGTACGAGATTGCACTTGACCGTCTGGCAGAAAT
GCTGGCTGAGGCTCGTACTGGTCTATCCTCTGTGTCGATTTCCTGTCGAT
GGGCGATCAGACAACTGCCTGAATTCATGGAACTTTTGCGGGAGCGCAAA
CCGCTAGCTTTGGTTATGCTAGCATATCACTGCGTTGTCTTCCATCACCT
GAGGGATGCATGGTATATGGGGGATCGGGGTAGCAGAGTAGCACGGGCAT
TATGGGAAGTTCTGGACGATAAATGGAGGCCACTGATTGAGAGTCATATG
CTGGAAATATTCGGAGAGACACATCCAGTTAATACGCCTGATACAGCAGG
AATAGAACATCAGGAAACCATTTCGTGA back to topCoding sequence (CDS) from alignment at An12:167287..168614- >CBS51388_007453-T1 ID=CBS51388_007453-T1|Name=CBS51388_007453-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2514bp|location=Sequence derived from alignment at An12:167287..168614- (Aspergillus niger CBS 513.88)
TGTGATGAGTTACGACCCTCCTGTTCAAATTGCTCAAAACGTCTAGCAAC
CTGCGAGTATGACTCCAGCTCATCACTGCTATGGACAAATGAAGAACCCC
CTTCTCGCACACGGTCCACGAAGTCTAGCCCAGCAGGAGCCTCCCAGTCT
GACTCTGCTGCGGCTACGACTGCCAACTCCCTCAACATCCTGGGAAGATG
GGGTGATGCATTCGCCGCCTCGCAAGCAGTCCCCAGCTTGAACATCACAG
ACCTGGAGCTGATGATGCAGTGGTGCAACTCAACGCACAAAAGTGTGTCT
CGGGGCGAACACACGGACCACATTTGGCGCTTTCGCGCTTCAGAGGAAGC
AATCACGCATCCTTTCCTAATGCATGGGTTACTCGCGCTTTCCTCTCTGC
ATATTGCACGAACAAAGCATGATACCCAGCAGCGTCCCATTTATCTCAGC
ACTGCAGTTGCACATCAGGCTCAAGCACTGGCACTTTTCCGCGAGAGGCT
AAGCGATATCAACTCATCTAATGCAAGGGCTATGTTTGCATTCGCCAGTG
TTGTGGTCTACTACACTTTTGGCTTACCTCACGCACCCGAGTCTAGCGAT
CCATGGGCAAACGTGGATGACCTGATTCAGATATTCACGCTCGCGCGCGG
GGTTCAACATATACTCAAGCAAGCTACTTCGGTCATAAAGAGCGATGAAT
GGAGCATGATTTTCAAGGTGGAAGACCTGAATGAGGACTACTTGAGAGAC
GCACAGTCAAGCTTGGAGCGGTTGCATGAGGTGAACAACGCTTGCGGGGC
TCAGGACGACACCCATGACACAGCTGCGTACGAGATTGCACTTGACCGTC
TGGCAGAAATGCTGGCTGAGGCTCGTACTGGTCTATCCTCTGTGTCGATT
TCCTGTCGATGGGCGATCAGACAACTGCCTGAATTCATGGAACTTTTGCG
GGAGCGCAAACCGCTAGCTTTGGTTATGCTAGCATATCACTGCGTTGTCT
TCCATCACCTGAGGGATGCATGGTATATGGGGGATCGGGGTAGCAGAGTA
GCACGGGCATTATGGGAAGTTCTGGACGATAAATGGAGGCCACTGATTGA
GAGTCATATGCTGGAAATATTCGGAGAGACACATCCAGTTAATACGCCTG
ATACAGCAGGAATAGAACATCAGGAAACCATTTCGTGAATGGCACTTAGA
AGACCCCATCGCAAATCGCGCCACGGCTGCTTGCAATGCAAGCGAAGGCG
GGTGAAGTGTGATGAGTTACGACCCTCCTGTTCAAATTGCTCAAAACGTC
TAGCAACCTGCGAGTATGACTCCAGCTCATCACTGCTATGGACAAATGAA
GAACCCCCTTCTCGCACACGGTCCACGAAGTCTAGCCCAGCAGGAGCCTC
CCAGTCTGACTCTGCTGCGGCTACGACTGCCAACTCCCTCAACATCCTGG
GAAGATGGGGTGATGCATTCGCCGCCTCGCAAGCAGTCCCCAGCTTGAAC
ATCACAGACCTGGAGCTGATGATGCAGTGGTGCAACTCAACGCACAAAAG
TGTGTCTCGGGGCGAACACACGGACCACATTTGGCGCTTTCGCGCTTCAG
AGGAAGCAATCACGCATCCTTTCCTAATGCATGGGTTACTCGCGCTTTCC
TCTCTGCATATTGCACGAACAAAGCATGATACCCAGCAGCGTCCCATTTA
TCTCAGCACTGCAGTTGCACATCAGGCTCAAGCACTGGCACTTTTCCGCG
AGAGGCTAAGCGATATCAACTCATCTAATGCAAGGGCTATGTTTGCATTC
GCCAGTGTTGTGGTCTACTACACTTTTGGCTTACCTCACGCACCCGAGTC
TAGCGATCCATGGGCAAACGTGGATGACCTGATTCAGATATTCACGCTCG
CGCGCGGGGTTCAACATATACTCAAGCAAGCTACTTCGGTCATAAAGAGC
GATGAATGGAGCATGATTTTCAAGGTGGAAGACCTGAATGAGGACTACTT
GAGAGACGCACAGTCAAGCTTGGAGCGGTTGCATGAGGTGAACAACGCTT
GCGGGGCTCAGGACGACACCCATGACACAGCTGCGTACGAGATTGCACTT
GACCGTCTGGCAGAAATGCTGGCTGAGGCTCGTACTGGTCTATCCTCTGT
GTCGATTTCCTGTCGATGGGCGATCAGACAACTGCCTGAATTCATGGAAC
TTTTGCGGGAGCGCAAACCGCTAGCTTTGGTTATGCTAGCATATCACTGC
GTTGTCTTCCATCACCTGAGGGATGCATGGTATATGGGGGATCGGGGTAG
CAGAGTAGCACGGGCATTATGGGAAGTTCTGGACGATAAATGGAGGCCAC
TGATTGAGAGTCATATGCTGGAAATATTCGGAGAGACACATCCAGTTAAT
ACGCCTGATACAGCAGGAATAGAACATCAGGAAACCATTTCGTGAATGGC
ACTTAGAAGACCCCATCGCAAATCGCGCCACGGCTGCTTGCAATGCAAGC
GAAGGCGGGTGAAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0042025 | host cell nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008270 | zinc ion binding |
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR001138 |
| DBxref | PFAM:PF00172 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An12 | supercontig | An12:167287..168614 - |
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