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CBS51388_007597-T1, CBS51388_007597-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_007597-T1
Unique NameCBS51388_007597-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An12:635516..637165+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_007597-T1 ID=CBS51388_007597-T1|Name=CBS51388_007597-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1650bp|location=Sequence derived from alignment at An12:635516..637165+ (Aspergillus niger CBS 513.88)
ATGTTTCGAAAATCCGCTTCCCTCCTGGGCCAACGGCTCATGGCCGTTTG
TCTCCTGTGCTGGTGCGTTTCGCTAGCGACCGCCGCAAGCACAGAAGAAT
GGAAGACGCGATCCATCTACCAGACGATGACGGATCGGTTTGCCCTCACC
AACGGTTCGACGACCGCACCATGCAATACTACGGTAGCCAACTACTGTGG
CGGGTCTTGGCAGGGGACGATCGATAAGCTGGACTACATCCAAGGCATGG
GGTTCGATGCGATCATGATCTCTCCCGTAATTAAAAACATTGCGGGGCGA
TCTAAGGACGGTGAGGCCTACCATGGATACTGGCCTCTGGATCTATACGA
GATCAATTCTCATTTCGGAACCCGGGAGGAACTGTTGAAGCTGAGCGAGG
AGATCCACGCACGCGGCATGTACTTGCTGCTGGACGTCGTCATCAATAAT
ATGGCTTACATGACGGACGGCGAGGATCCTGCGACGACCATTGACTACAA
TGTTTTCCCTCAGTTCAATGGATCTTCATACTTCCACCCCTACTGTCTTA
TTACGAACTGGAATAACTATACGGACGCGCAGTGGTGTCAGACTGGTGAC
AATTATACTGCACTCCCAGATCTGTACACAGAACACACCGCGGTGCAGAA
CATCTTAATGGACTGGAGTAAATCGGTCATCAGCAATTACTCCGTCGACG
GGCTACGAATCGACGCTGCCAAGTCCCTCACTCCCAGCTTTCTGCCTACA
TATGCGAGTACCGTGGGCGGATTCATGACCGGCGAAGTCATGGATTCGAA
CGCCACCAACGTGTGCAAATATCAGACGGATTACCTGCCAAGTCTTCCAA
ACTACCCCCTCTATTACTCCATGATCACGGCCTTCCTCAACGGCGAGCCT
GCGACCTTGCTCGAGGAAATCGCGACGATCAATGATCTTTGCCCTGATAC
GTTCGCAATGGTCAACTTCATCGAAGATCAAGACGTTGACCGATGGGCCT
ACATGAATGACGACATCATGCTAGCTAAAACTGCACTGACCTTCATGATG
CTCTACGACGGTATTCCCTTGGTCTACCAGGGTCTGGAGCAGGCCATTGC
CTATTCCAACCGAGCGGCCTTGTGGTTGACAGATTTCGACACCAATGCGA
CGCTTTATAAACACATCAAGAAACTCAATGCCATCCGCAAACATGCCATT
AACCTTGATTCCAGCTACATCAGTTCGAAAACATATCCCATCTATCAAGG
AGGTAGCGAGTTGGCTTTCTGGAAGGGCAACAATGGACGCCAAGTCATCA
TGGTTTTATCTACGGCGGGCTCGAATGGTTCAGCTTATACTCTGACACTA
CCCGTAAGCTATGGGGCTAGTGAGGTGGTCACGGAAGTGCTGAACTGCGT
CAATTATACGGTCAACACTTACAGTCAATTGGTCGTGGACATGGATAAGG
GCGAACCTCGGGTCTTCTTTCCCGCTTCGATGATGCCGGGGAGCGGGCTG
TGTGGCTACAATACTTCTAATGTGACGTATTCTGAGCTGAGACTTGCTGC
TGTGGGATCTTCGTCGTCTGCTGGTAGCCACTCTGTCATACCGTCTGCTT
TTGCTTCGCTTTTCATGGCGATAGTTGCATTTTTGGCATTCCGGATATAA
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Coding sequence (CDS) from alignment at An12:635516..637165+

>CBS51388_007597-T1 ID=CBS51388_007597-T1|Name=CBS51388_007597-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1650bp|location=Sequence derived from alignment at An12:635516..637165+ (Aspergillus niger CBS 513.88)
ATGTTTCGAAAATCCGCTTCCCTCCTGGGCCAACGGCTCATGGCCGTTTG
TCTCCTGTGCTGGTGCGTTTCGCTAGCGACCGCCGCAAGCACAGAAGAAT
GGAAGACGCGATCCATCTACCAGACGATGACGGATCGGTTTGCCCTCACC
AACGGTTCGACGACCGCACCATGCAATACTACGGTAGCCAACTACTGTGG
CGGGTCTTGGCAGGGGACGATCGATAAGCTGGACTACATCCAAGGCATGG
GGTTCGATGCGATCATGATCTCTCCCGTAATTAAAAACATTGCGGGGCGA
TCTAAGGACGGTGAGGCCTACCATGGATACTGGCCTCTGGATCTATACGA
GATCAATTCTCATTTCGGAACCCGGGAGGAACTGTTGAAGCTGAGCGAGG
AGATCCACGCACGCGGCATGTACTTGCTGCTGGACGTCGTCATCAATAAT
ATGGCTTACATGACGGACGGCGAGGATCCTGCGACGACCATTGACTACAA
TGTTTTCCCTCAGTTCAATGGATCTTCATACTTCCACCCCTACTGTCTTA
TTACGAACTGGAATAACTATACGGACGCGCAGTGGTGTCAGACTGGTGAC
AATTATACTGCACTCCCAGATCTGTACACAGAACACACCGCGGTGCAGAA
CATCTTAATGGACTGGAGTAAATCGGTCATCAGCAATTACTCCGTCGACG
GGCTACGAATCGACGCTGCCAAGTCCCTCACTCCCAGCTTTCTGCCTACA
TATGCGAGTACCGTGGGCGGATTCATGACCGGCGAAGTCATGGATTCGAA
CGCCACCAACGTGTGCAAATATCAGACGGATTACCTGCCAAGTCTTCCAA
ACTACCCCCTCTATTACTCCATGATCACGGCCTTCCTCAACGGCGAGCCT
GCGACCTTGCTCGAGGAAATCGCGACGATCAATGATCTTTGCCCTGATAC
GTTCGCAATGGTCAACTTCATCGAAGATCAAGACGTTGACCGATGGGCCT
ACATGAATGACGACATCATGCTAGCTAAAACTGCACTGACCTTCATGATG
CTCTACGACGGTATTCCCTTGGTCTACCAGGGTCTGGAGCAGGCCATTGC
CTATTCCAACCGAGCGGCCTTGTGGTTGACAGATTTCGACACCAATGCGA
CGCTTTATAAACACATCAAGAAACTCAATGCCATCCGCAAACATGCCATT
AACCTTGATTCCAGCTACATCAGTTCGAAAACATATCCCATCTATCAAGG
AGGTAGCGAGTTGGCTTTCTGGAAGGGCAACAATGGACGCCAAGTCATCA
TGGTTTTATCTACGGCGGGCTCGAATGGTTCAGCTTATACTCTGACACTA
CCCGTAAGCTATGGGGCTAGTGAGGTGGTCACGGAAGTGCTGAACTGCGT
CAATTATACGGTCAACACTTACAGTCAATTGGTCGTGGACATGGATAAGG
GCGAACCTCGGGTCTTCTTTCCCGCTTCGATGATGCCGGGGAGCGGGCTG
TGTGGCTACAATACTTCTAATGTGACGTATTCTGAGCTGAGACTTGCTGC
TGTGGGATCTTCGTCGTCTGCTGGTAGCCACTCTGTCATACCGTCTGCTT
TTGCTTCGCTTTTCATGGCGATAGTTGCATTTTTGGCATTCCGGATATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0016052carbohydrate catabolic process
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004556alpha-amylase activity
GO:0005509calcium ion binding
GO:0003824catalytic activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_007597CBS51388_007597Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007597-T1.exon1CBS51388_007597-T1.exon1Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007597-T1.cdsCBS51388_007597-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007597-T1CBS51388_007597-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
NoteSECRETED:SignalP(1-28)
NoteCAZy:GH13_15
NoteCAZy:GH13_27
NoteCAZy:GH13_7
NoteCAZy:GH13_19
NoteCAZy:GH13_20
NoteCAZy:GH13_36
NoteCAZy:GH13_2
NoteCAZy:GH13
NoteCAZy:GH13_1
DBxrefInterPro:IPR017853
DBxrefInterPro:IPR015340
DBxrefInterPro:IPR013777
DBxrefInterPro:IPR013780
DBxrefInterPro:IPR006047
DBxrefPFAM:PF09260
DBxrefPFAM:PF00128
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An12supercontigAn12:635516..637165 +
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