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CBS51388_007646-T1, CBS51388_007646-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_007646-T1
Unique NameCBS51388_007646-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An12:780111..781690+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_007646-T1 ID=CBS51388_007646-T1|Name=CBS51388_007646-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1580bp|location=Sequence derived from alignment at An12:780111..781690+ (Aspergillus niger CBS 513.88)
ATGCCATCAGAAGATAGTGCGACACCCGTTCAATCGAACACCTCGACTGG
AGTGGCGACCCCCGAACCACCCTACAGCATCTTCGATAAGCGACAGAAGT
GGTTAATCATCATTATTGTATCTACTGCAGCAACATGTACGTTGTCTTAA
TATTTACCTCTCGGTAGCCCACTAACATCTAAATAGTCTCCGGTTTCGCA
TCCAACATTTATTTCCCAGCTTTACCAACAATCGCCAATGACCTCAATGT
CTCCATCGAACTTCTTAACTTAACTGTTACATCCTATCTCATCTTCCAGG
GTCTCGCCCCCAGTCTCTGGGGCCCAGTATCCGACGTGAAAGGTCGCCGG
ACAGCATATATGTGCACATTTGTTGTCTTCCTAGGCGCCTGTATCGGACT
TGCCGAGTCGAAAAACTATGCGACGCTCATTATTCTCCGATGTCTTCAAA
GCACCGGCAGCGCTAGTACAATCGCAATTGGATCCGGCGTCATCAGCGAT
ATTACCACTCGGGCCGAGCGCGGTGGCTACATGGGAATCTTCCAAGCAGG
CTTGCTCGTCCCCGTTGCCGTTGGACCAGTCATCGGAGGTGGAATTGCTG
GATCTTTGGGATGGAAGGCGATCTTCTGGTTCCTGACTATTTACAGCGGC
GCTTTCCTCTGCTTTCTCATCGTCTTTCTGCCAGAGACTCTACGATCGAT
TGTTGGCAACGGGTCTCTGAAGTCTTCCAACCCATTGGTGAATTTTCCGC
TGGAATTACATCAGAAAACGACCAAGGTCGAGTGGGAGCAGGTCCCGGAT
GGCCAATCGCAGCGCGCAGCAAAGAAAAAGATTGATGTTTTGGGACCGCT
TCGGATACTCATCAGCAACCACGCGGCACCTATTATAATTTTTCTGGCGG
TGTATTACGCTGTTTGGCAGATGAGCATCACAGCGATGTCCTCCCTTTTC
AAAAGCCGCTATGGTTTGTCAGAGATTCAAATCGGTTTGACGTTCATCGC
CAACGGTGTAGGGTCCATGATCGGAACTCTGGTGACCGGCAAAATTCTTG
ATGCCGACTATCGTCGTGTGAAATCTAGGTATGAGGCTTCGCTCGATGCC
GAGCAGGGGGAGGAAACCACTGCGGCTACACGAGAAGAGAACTTTCCCCT
CGAAAAGGCACGTCTTCGACTCGTGCCCATCTTTTCCATCCTTCAGTGCC
TTTCTATCATTTTGTTTGGTTGGACGATTAATTACGCCCGCAAAGTGCAC
ATCGCTGTACCTATCGTCTCGACCTTCATCACGGGCTGGACTGCTGTCTC
CACACAGTCGCTCATCATGACATATCTTGTGGATATATTCCCTGATAGGA
GCGCTGCAGCTAGTGCCAGTCTAAACCTTGCACGATGTCTCTTTGCTGCG
GGAGGTACCAGCTTTATCATGCCTCTTATCAATAGCGTTGGGGTTGGCGT
GGCCTTCACCATTTGCGTCGCTGTACAGCTACTTGCACTGGTAGGGCCTT
TGATTCAGTGGAGATTTGCCGCTGGATGGAGAAGAAAGGAGAGGGAACGA
GATGCCCAGAGGGCGGACGTGAAGAACTAA
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Coding sequence (CDS) from alignment at An12:780111..781690+

>CBS51388_007646-T1 ID=CBS51388_007646-T1|Name=CBS51388_007646-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3060bp|location=Sequence derived from alignment at An12:780111..781690+ (Aspergillus niger CBS 513.88)
ATGCCATCAGAAGATAGTGCGACACCCGTTCAATCGAACACCTCGACTGG
AGTGGCGACCCCCGAACCACCCTACAGCATCTTCGATAAGCGACAGAAGT
GGTTAATCATCATTATTGTATCTACTGCAGCAACATTCTCCGGTTTCGCA
TCCAACATTTATTTCCCAGCTTTACCAACAATCGCCAATGACCTCAATGT
CTCCATCGAACTTCTTAACTTAACTGTTACATCCTATCTCATCTTCCAGG
GTCTCGCCCCCAGTCTCTGGGGCCCAGTATCCGACGTGAAAGGTCGCCGG
ACAGCATATATGTGCACATTTGTTGTCTTCCTAGGCGCCTGTATCGGACT
TGCCGAGTCGAAAAACTATGCGACGCTCATTATTCTCCGATGTCTTCAAA
GCACCGGCAGCGCTAGTACAATCGCAATTGGATCCGGCGTCATCAGCGAT
ATTACCACTCGGGCCGAGCGCGGTGGCTACATGGGAATCTTCCAAGCAGG
CTTGCTCGTCCCCGTTGCCGTTGGACCAGTCATCGGAGGTGGAATTGCTG
GATCTTTGGGATGGAAGGCGATCTTCTGGTTCCTGACTATTTACAGCGGC
GCTTTCCTCTGCTTTCTCATCGTCTTTCTGCCAGAGACTCTACGATCGAT
TGTTGGCAACGGGTCTCTGAAGTCTTCCAACCCATTGGTGAATTTTCCGC
TGGAATTACATCAGAAAACGACCAAGGTCGAGTGGGAGCAGGTCCCGGAT
GGCCAATCGCAGCGCGCAGCAAAGAAAAAGATTGATGTTTTGGGACCGCT
TCGGATACTCATCAGCAACCACGCGGCACCTATTATAATTTTTCTGGCGG
TGTATTACGCTGTTTGGCAGATGAGCATCACAGCGATGTCCTCCCTTTTC
AAAAGCCGCTATGGTTTGTCAGAGATTCAAATCGGTTTGACGTTCATCGC
CAACGGTGTAGGGTCCATGATCGGAACTCTGGTGACCGGCAAAATTCTTG
ATGCCGACTATCGTCGTGTGAAATCTAGGTATGAGGCTTCGCTCGATGCC
GAGCAGGGGGAGGAAACCACTGCGGCTACACGAGAAGAGAACTTTCCCCT
CGAAAAGGCACGTCTTCGACTCGTGCCCATCTTTTCCATCCTTCAGTGCC
TTTCTATCATTTTGTTTGGTTGGACGATTAATTACGCCCGCAAAGTGCAC
ATCGCTGTACCTATCGTCTCGACCTTCATCACGGGCTGGACTGCTGTCTC
CACACAGTCGCTCATCATGACATATCTTGTGGATATATTCCCTGATAGGA
GCGCTGCAGCTAGTGCCAGTCTAAACCTTGCACGATGTCTCTTTGCTGCG
GGAGGTACCAGCTTTATCATGCCTCTTATCAATAGCGTTGGGGTTGGCGT
GGCCTTCACCATTTGCGTCGCTGTACAGCTACTTGCACTGGTAGGGCCTT
TGATTCAGTGGAGATTTGCCGCTGGATGGAGAAGAAAGGAGAGGGAACGA
GATGCCCAGAGGGCGGACGTGAAGAACTAAATGCCATCAGAAGATAGTGC
GACACCCGTTCAATCGAACACCTCGACTGGAGTGGCGACCCCCGAACCAC
CCTACAGCATCTTCGATAAGCGACAGAAGTGGTTAATCATCATTATTGTA
TCTACTGCAGCAACATTCTCCGGTTTCGCATCCAACATTTATTTCCCAGC
TTTACCAACAATCGCCAATGACCTCAATGTCTCCATCGAACTTCTTAACT
TAACTGTTACATCCTATCTCATCTTCCAGGGTCTCGCCCCCAGTCTCTGG
GGCCCAGTATCCGACGTGAAAGGTCGCCGGACAGCATATATGTGCACATT
TGTTGTCTTCCTAGGCGCCTGTATCGGACTTGCCGAGTCGAAAAACTATG
CGACGCTCATTATTCTCCGATGTCTTCAAAGCACCGGCAGCGCTAGTACA
ATCGCAATTGGATCCGGCGTCATCAGCGATATTACCACTCGGGCCGAGCG
CGGTGGCTACATGGGAATCTTCCAAGCAGGCTTGCTCGTCCCCGTTGCCG
TTGGACCAGTCATCGGAGGTGGAATTGCTGGATCTTTGGGATGGAAGGCG
ATCTTCTGGTTCCTGACTATTTACAGCGGCGCTTTCCTCTGCTTTCTCAT
CGTCTTTCTGCCAGAGACTCTACGATCGATTGTTGGCAACGGGTCTCTGA
AGTCTTCCAACCCATTGGTGAATTTTCCGCTGGAATTACATCAGAAAACG
ACCAAGGTCGAGTGGGAGCAGGTCCCGGATGGCCAATCGCAGCGCGCAGC
AAAGAAAAAGATTGATGTTTTGGGACCGCTTCGGATACTCATCAGCAACC
ACGCGGCACCTATTATAATTTTTCTGGCGGTGTATTACGCTGTTTGGCAG
ATGAGCATCACAGCGATGTCCTCCCTTTTCAAAAGCCGCTATGGTTTGTC
AGAGATTCAAATCGGTTTGACGTTCATCGCCAACGGTGTAGGGTCCATGA
TCGGAACTCTGGTGACCGGCAAAATTCTTGATGCCGACTATCGTCGTGTG
AAATCTAGGTATGAGGCTTCGCTCGATGCCGAGCAGGGGGAGGAAACCAC
TGCGGCTACACGAGAAGAGAACTTTCCCCTCGAAAAGGCACGTCTTCGAC
TCGTGCCCATCTTTTCCATCCTTCAGTGCCTTTCTATCATTTTGTTTGGT
TGGACGATTAATTACGCCCGCAAAGTGCACATCGCTGTACCTATCGTCTC
GACCTTCATCACGGGCTGGACTGCTGTCTCCACACAGTCGCTCATCATGA
CATATCTTGTGGATATATTCCCTGATAGGAGCGCTGCAGCTAGTGCCAGT
CTAAACCTTGCACGATGTCTCTTTGCTGCGGGAGGTACCAGCTTTATCAT
GCCTCTTATCAATAGCGTTGGGGTTGGCGTGGCCTTCACCATTTGCGTCG
CTGTACAGCTACTTGCACTGGTAGGGCCTTTGATTCAGTGGAGATTTGCC
GCTGGATGGAGAAGAAAGGAGAGGGAACGAGATGCCCAGAGGGCGGACGT
GAAGAACTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_007646CBS51388_007646Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007646-T1.exon1CBS51388_007646-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_007646-T1.exon2CBS51388_007646-T1.exon2Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007646-T1.cdsCBS51388_007646-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_007646-T1CBS51388_007646-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR011701
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An12supercontigAn12:780111..781690 +
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