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Sequences
The following sequences are available for this feature:
mRNA from alignment at An12:886991..888328- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_007682-T1 ID=CBS51388_007682-T1|Name=CBS51388_007682-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1338bp|location=Sequence derived from alignment at An12:886991..888328- (Aspergillus niger CBS 513.88)
ATGCCCGTTCACGGTGGAACAATGAGCTATCACGGCTTTCGCTATGTCTC
GCGCAGCATGGGGTTCGCAATGGGATACTTGTACTGGTACTCGCTGGGTA
TTTTGGTCCCCTATGAGGTTGTCGCAGCCTCCATGGTCATCGATTACTGG
CATCCGAACGTCAATCTGGCCGTCTGGATTACCATCATGCTAGTCGTTAT
CGTGCTTCTCAACTGTCTCCCGGTGGGCGTATATGGCGAAACTGAGTTCT
GGTTCTCCGGAATCAAGATCATTACTCTGATCGGTTTGCTGCTCTTGTCC
TTCATACTCTTCTGGGGCGGTGGTCCCAACCGGCAACGCCTCGGGTTTCA
TTACTGGAAAGATCCAGGAGTCATGAACACCTACCTTGTCAGCGGTGATG
CCGGTCGCTTCGTCGGACTTCTGCAGTGTATCGTCAAATCAGCTATCGCC
TTCATCTTCGCGCCCGAATTAGTCGTCATTAGTGGCGGTGAAATGGAATC
CCCGCGTCGCAACGTCCCCAAGGCCGCTCGTCGCTATATCTACCGACTGG
TCATCTTCTACGTCTTGGGCGCCTTGGCCATCGGCGTCATCTGCTCCTCC
AACGCCAAACAACTAACCGCCGGCTCTGGCACTGACGCCTCCTCCTCCCC
CTTCGTCGTCGCAATCTCCAACGCCGGCATCCCCGTCCTCGACAGCATCG
TCAACGCCGNGATTCTCACCTCCGCCTGGTCCGCCGGCAACTCCTTCCTC
TACATGTCCTCCCGCTCACTCTACTCCCTTGCAGTCTCCGGCAACGCCCC
GAACATCTTCAAAGCCTGCAACCGATGGGGCGTACCGTACTACGCCGTGG
CCATCTCCTCCCTTTTCTCCGTCCTCGCCTACATGGCCGTCGGCAGCGGC
AGCTACACCGTCTTCAACTGGCTCATCAATTTCACCAACACCTCGGGCTT
CATTTCCTGGTTCTGCTGCAGCATCGTCTACTTCCGATTCAACAAGGCTG
TGAAGGTACAGGGCGTCGAGAAACCGTATGCATCTCGCATGCAGCCCTGG
GGCATGTACATCGGTCTGATAGGGTCGGTTTTCCTTGCCCTCATCAATGG
ATTCACGTGTTTCTTCCCGTCCGAGTGGTCCGCGAGTAACTTCTTCACGG
CATATATCGGTATCCCGGCGTTTGTGGTGCTATATGTTGTTCATCGCATC
GTGTTCTGGAGCGATCCGTGGGCGTGGAGGAGTGAGGAGGTTGATTTGCA
TACCGGGTTGAGGGAGATTATGGAGGCGGAGAAGCCCGAGAGGGTCAGGG
ATACATGGTGGAAGAAGTTGGCGGTTTTGGTGGAGTAG back to topCoding sequence (CDS) from alignment at An12:886991..888328- >CBS51388_007682-T1 ID=CBS51388_007682-T1|Name=CBS51388_007682-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1338bp|location=Sequence derived from alignment at An12:886991..888328- (Aspergillus niger CBS 513.88)
ATGCCCGTTCACGGTGGAACAATGAGCTATCACGGCTTTCGCTATGTCTC
GCGCAGCATGGGGTTCGCAATGGGATACTTGTACTGGTACTCGCTGGGTA
TTTTGGTCCCCTATGAGGTTGTCGCAGCCTCCATGGTCATCGATTACTGG
CATCCGAACGTCAATCTGGCCGTCTGGATTACCATCATGCTAGTCGTTAT
CGTGCTTCTCAACTGTCTCCCGGTGGGCGTATATGGCGAAACTGAGTTCT
GGTTCTCCGGAATCAAGATCATTACTCTGATCGGTTTGCTGCTCTTGTCC
TTCATACTCTTCTGGGGCGGTGGTCCCAACCGGCAACGCCTCGGGTTTCA
TTACTGGAAAGATCCAGGAGTCATGAACACCTACCTTGTCAGCGGTGATG
CCGGTCGCTTCGTCGGACTTCTGCAGTGTATCGTCAAATCAGCTATCGCC
TTCATCTTCGCGCCCGAATTAGTCGTCATTAGTGGCGGTGAAATGGAATC
CCCGCGTCGCAACGTCCCCAAGGCCGCTCGTCGCTATATCTACCGACTGG
TCATCTTCTACGTCTTGGGCGCCTTGGCCATCGGCGTCATCTGCTCCTCC
AACGCCAAACAACTAACCGCCGGCTCTGGCACTGACGCCTCCTCCTCCCC
CTTCGTCGTCGCAATCTCCAACGCCGGCATCCCCGTCCTCGACAGCATCG
TCAACGCCGNGATTCTCACCTCCGCCTGGTCCGCCGGCAACTCCTTCCTC
TACATGTCCTCCCGCTCACTCTACTCCCTTGCAGTCTCCGGCAACGCCCC
GAACATCTTCAAAGCCTGCAACCGATGGGGCGTACCGTACTACGCCGTGG
CCATCTCCTCCCTTTTCTCCGTCCTCGCCTACATGGCCGTCGGCAGCGGC
AGCTACACCGTCTTCAACTGGCTCATCAATTTCACCAACACCTCGGGCTT
CATTTCCTGGTTCTGCTGCAGCATCGTCTACTTCCGATTCAACAAGGCTG
TGAAGGTACAGGGCGTCGAGAAACCGTATGCATCTCGCATGCAGCCCTGG
GGCATGTACATCGGTCTGATAGGGTCGGTTTTCCTTGCCCTCATCAATGG
ATTCACGTGTTTCTTCCCGTCCGAGTGGTCCGCGAGTAACTTCTTCACGG
CATATATCGGTATCCCGGCGTTTGTGGTGCTATATGTTGTTCATCGCATC
GTGTTCTGGAGCGATCCGTGGGCGTGGAGGAGTGAGGAGGTTGATTTGCA
TACCGGGTTGAGGGAGATTATGGAGGCGGAGAAGCCCGAGAGGGTCAGGG
ATACATGGTGGAAGAAGTTGGCGGTTTTGGTGGAGTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016020 | membrane |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR004841 |
| DBxref | PFAM:PF13520 |
| DBxref | PFAM:PF00324 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An12 | supercontig | An12:886991..888328 - |
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