|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at An13:254284..255023- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_008325-T1 ID=CBS51388_008325-T1|Name=CBS51388_008325-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=740bp|location=Sequence derived from alignment at An13:254284..255023- (Aspergillus niger CBS 513.88)
ATGGATTCCGCCAAGCAGCCCGCTAAGCTCGTCAAGGTCACCCGTGTCCT
CGGCCGTACCGGTACGTCGTGAATATCTCAATTTTCCGAATTTCGATGCC
TTTCGCCTGGATATATACAATTGCGGTGTTTCCGCAACGGCGTGGAGATG
GTACCTTTTGCTTGAGAGCAGATTCTAACAGGCATTTTACTTTATAGGAT
CCCGTGGTGGTGTCACCCAGGTCCGCGTCGAGTTCATGGACGATACCTCC
CGCAGCATCATCCGTAACGTCAAGGGCCCAGGTATGCGATTTCTCCGTTG
AATACAGTTGATGATCTATATTTTCTACGGCTATGGTGGTGGCGCTGGTT
GGACCGAATCGAATTATTTCCCCTCGAAGAGAAAATCCCGCGAGAAGAAT
GGCAAAGAATGAGAATGTGCGCACGCATCGGAAATCGACAACATCCACGA
TTCTATAAGCGAAAAGGACGAATCTCCCAAACCCAACACGACGCACGCAG
GAATCGAAGAGAAGGAATAAGGAAACCAAGCAGTATCGCGGGTTATTTTT
CATCTCCACGGGGAAATATCGCATTCAGTCCAGCCAGCCAGCCAACCAAC
CAGTCGCTCCGTCATGTCCAAACCAAACCCATATATCGCACACATCAAGC
TAACTAAACTCCTCTTCGTCGCAAACAGTCAAGGTCGACGACATCCTCTG
CCTGCTCGAGTCCGAACGCGAGGCCCGCCGTCTCCGTTAA back to topCoding sequence (CDS) from alignment at An13:254284..255023- >CBS51388_008325-T1 ID=CBS51388_008325-T1|Name=CBS51388_008325-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=621bp|location=Sequence derived from alignment at An13:254284..255023- (Aspergillus niger CBS 513.88)
TCAAGGTCGACGACATCCTCTGCCTGCTCGAGTCCGAACGCGAGGCCCGC
CGTCTCCGTTAAGATCCCGTGGTGGTGTCACCCAGGTCCGCGTCGAGTTC
ATGGACGATACCTCCCGCAGCATCATCCGTAACGTCAAGGGCCCAGATGG
ATTCCGCCAAGCAGCCCGCTAAGCTCGTCAAGGTCACCCGTGTCCTCGGC
CGTACCGTCAAGGTCGACGACATCCTCTGCCTGCTCGAGTCCGAACGCGA
GGCCCGCCGTCTCCGTTAAGATCCCGTGGTGGTGTCACCCAGGTCCGCGT
CGAGTTCATGGACGATACCTCCCGCAGCATCATCCGTAACGTCAAGGGCC
CAGATGGATTCCGCCAAGCAGCCCGCTAAGCTCGTCAAGGTCACCCGTGT
CCTCGGCCGTACCGTCAAGGTCGACGACATCCTCTGCCTGCTCGAGTCCG
AACGCGAGGCCCGCCGTCTCCGTTAAGATCCCGTGGTGGTGTCACCCAGG
TCCGCGTCGAGTTCATGGACGATACCTCCCGCAGCATCATCCGTAACGTC
AAGGGCCCAGATGGATTCCGCCAAGCAGCCCGCTAAGCTCGTCAAGGTCA
CCCGTGTCCTCGGCCGTACCG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005840 | ribosome |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003735 | structural constituent of ribosome |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006412 | translation |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR012340 |
| DBxref | InterPro:IPR028626 |
| DBxref | InterPro:IPR000289 |
| DBxref | PFAM:PF01200 |
| Product | 40S ribosomal protein S28 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An13 | supercontig | An13:254284..255023 - |
|
