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Sequences
The following sequences are available for this feature:
mRNA from alignment at An13:552924..553805- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_008425-T1 ID=CBS51388_008425-T1|Name=CBS51388_008425-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=882bp|location=Sequence derived from alignment at An13:552924..553805- (Aspergillus niger CBS 513.88)
ATGTCGTTTCCCTACAAGAAAGTCCTCATCATCGGTGCCACCTCCGGCAT
CGGCAAGGCGCTCGCCGCCAAGGTGATCGAGAACGGCACCCAGCTTGTCA
TTGCCGGCAGAAGAAAGGAGAACCTGGATGAGTTCGTCCAGAAATACGGC
AGCGACAAGGTCGCATCCAAGGTCTTTGACGTGATGCAGCTGGACCAGGT
ACGCGGCCCCCCTCCTCCCCCCTGTACCATCCATATCACACCCACACCCT
ACTCACGTACTATTACTACATAGATCCCCCAGTTCGCCACCGAAATCACC
ACCGCCCACCCCGACCTAGACTGCATCTTCATCAACTCCGGCATCCAGCG
CCCCTTCGACTTCTCCAAGCCCAACTCCGTCGATCTCACCACCTTCGACA
CCGAGCTCATCACCAACTACACCTCCGCCGTCTACCTCACCAAGGCCTTC
CTCCCCCACCTGCAGTCCCTCCCCACCCAGACCGCCCTCGCCTACACCAC
CTCCCAAATGGCCCTCGTGCCCATGATGCGCTGCCCCAACTACGGCGCCT
CCAAGGCCGCCTTGCACCACTTCATCCTGGCTCTGCGCACGCAGGTCGCT
GAGGGCCCCGGCAACGTCAAGGTGCTGGAAATCTACCCGCCCGCTGTGCA
GACCGAGCTGCACGATCCCAAGCACCAGCCTGATCTGAAGAACGGACACT
TGATCGGCATGCCGTTGGATGAGTTTGTCGGTGAGGTGTGGCGCAGATTG
CAGTCTGGTGAGGATCAGATTGCTGTGGGTTCGGCGAACGATATCTACGA
GGCCTTTGAGACGAAGAGGCAGAGTCTGTATGCGGACATGACGGCGATGT
TGAACGGATTGTTGAAGCAGTTCTTGGTGTAA back to topCoding sequence (CDS) from alignment at An13:552924..553805- >CBS51388_008425-T1 ID=CBS51388_008425-T1|Name=CBS51388_008425-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1614bp|location=Sequence derived from alignment at An13:552924..553805- (Aspergillus niger CBS 513.88)
ATCCCCCAGTTCGCCACCGAAATCACCACCGCCCACCCCGACCTAGACTG
CATCTTCATCAACTCCGGCATCCAGCGCCCCTTCGACTTCTCCAAGCCCA
ACTCCGTCGATCTCACCACCTTCGACACCGAGCTCATCACCAACTACACC
TCCGCCGTCTACCTCACCAAGGCCTTCCTCCCCCACCTGCAGTCCCTCCC
CACCCAGACCGCCCTCGCCTACACCACCTCCCAAATGGCCCTCGTGCCCA
TGATGCGCTGCCCCAACTACGGCGCCTCCAAGGCCGCCTTGCACCACTTC
ATCCTGGCTCTGCGCACGCAGGTCGCTGAGGGCCCCGGCAACGTCAAGGT
GCTGGAAATCTACCCGCCCGCTGTGCAGACCGAGCTGCACGATCCCAAGC
ACCAGCCTGATCTGAAGAACGGACACTTGATCGGCATGCCGTTGGATGAG
TTTGTCGGTGAGGTGTGGCGCAGATTGCAGTCTGGTGAGGATCAGATTGC
TGTGGGTTCGGCGAACGATATCTACGAGGCCTTTGAGACGAAGAGGCAGA
GTCTGTATGCGGACATGACGGCGATGTTGAACGGATTGTTGAAGCAGTTC
TTGGTGTAAATGTCGTTTCCCTACAAGAAAGTCCTCATCATCGGTGCCAC
CTCCGGCATCGGCAAGGCGCTCGCCGCCAAGGTGATCGAGAACGGCACCC
AGCTTGTCATTGCCGGCAGAAGAAAGGAGAACCTGGATGAGTTCGTCCAG
AAATACGGCAGCGACAAGGTCGCATCCAAGGTCTTTGACGTGATGCAGCT
GGACCAGATCCCCCAGTTCGCCACCGAAATCACCACCGCCCACCCCGACC
TAGACTGCATCTTCATCAACTCCGGCATCCAGCGCCCCTTCGACTTCTCC
AAGCCCAACTCCGTCGATCTCACCACCTTCGACACCGAGCTCATCACCAA
CTACACCTCCGCCGTCTACCTCACCAAGGCCTTCCTCCCCCACCTGCAGT
CCCTCCCCACCCAGACCGCCCTCGCCTACACCACCTCCCAAATGGCCCTC
GTGCCCATGATGCGCTGCCCCAACTACGGCGCCTCCAAGGCCGCCTTGCA
CCACTTCATCCTGGCTCTGCGCACGCAGGTCGCTGAGGGCCCCGGCAACG
TCAAGGTGCTGGAAATCTACCCGCCCGCTGTGCAGACCGAGCTGCACGAT
CCCAAGCACCAGCCTGATCTGAAGAACGGACACTTGATCGGCATGCCGTT
GGATGAGTTTGTCGGTGAGGTGTGGCGCAGATTGCAGTCTGGTGAGGATC
AGATTGCTGTGGGTTCGGCGAACGATATCTACGAGGCCTTTGAGACGAAG
AGGCAGAGTCTGTATGCGGACATGACGGCGATGTTGAACGGATTGTTGAA
GCAGTTCTTGGTGTAAATGTCGTTTCCCTACAAGAAAGTCCTCATCATCG
GTGCCACCTCCGGCATCGGCAAGGCGCTCGCCGCCAAGGTGATCGAGAAC
GGCACCCAGCTTGTCATTGCCGGCAGAAGAAAGGAGAACCTGGATGAGTT
CGTCCAGAAATACGGCAGCGACAAGGTCGCATCCAAGGTCTTTGACGTGA
TGCAGCTGGACCAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016491 | oxidoreductase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR020904 |
| DBxref | InterPro:IPR002347 |
| DBxref | PFAM:PF08659 |
| DBxref | PFAM:PF13561 |
| DBxref | PFAM:PF00106 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An13 | supercontig | An13:552924..553805 - |
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