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Sequences
The following sequences are available for this feature:
mRNA from alignment at An14:121555..123116- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_008591-T1 ID=CBS51388_008591-T1|Name=CBS51388_008591-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1562bp|location=Sequence derived from alignment at An14:121555..123116- (Aspergillus niger CBS 513.88)
ATGGCTGCCGCACCATCTTCTCGTCCCTTTGAATACCTCGAAAGCCTTGC
TGGCACTGTCTTCTACAAACTTTACCAGCAGCCATCAACGGCTCTCGCCA
TTTTCAGGCGCATGCTGCCTGATCTGGGTATGTGTCGCATGTGCATTCAC
CACTCCGGTGCTTCATCAACTAACTGCCTGACTAGCAAAATGCTTTGTCA
TGGCACTTCTCTACCTAAAGGATCCGCTCCCCGCGGCGGATCTGGAGGCT
TGGGTTAAATCGGAGAGCTTGAAGTAAGTGCGGGTCAAGCACCCTGGGAA
GGTTTCCGCAGTGATTGTGGTTAACGTGAGCCTCACACAGAGAACGCGAC
AATGCACTCTCCATCCTAGGAAGACTGCATATTTTATCCAACACTGTTAC
GGCGGATAATGTCCGCGCCTACAAAGTCACCGATCCCTTCGCCACTTCAT
TGCGACACGCTCTCACCGGCGCCGACCAAACACAATCTTTTGGCGTCCTT
TCACAAGTGCCTGCTGGCTCGGAAGTCTCGATCCCCGAACTTGATGAGTA
TGCGCGACGACAGTGGGAAGGAGTGCTGGGATACATGGTCGGTACTGGAG
GCATGGGAGGTCCCCAAGTGACCCTCAGCAAAGGCGTGAAGGAGCTCCTG
CAGGCGGGTCATCTGGTCGAGATCCGAGATCGTCGCGTCGAAATCACCCA
GGATGGGTTTGCCTTTGTCCTGCAAGATGTCAGCACGCAGGTGTGGCATA
TCTTGATTCTTTACGTCGAGAGCGCCAGCGCCATCAAGATGGACAGTGTC
GAAGTCCTCTCGTTCGTGTTCCTTCTCAGCAGTCTCGAACTCGGAAAATC
ATATGAAAAGAACCACCTCAGTTCGAAACAACTGCGCATGCTGACCGACC
TTGCCGACTTTGGTATCGTCTATCAAGAATCGCCGGATGCACCGCGTTTC
TACCCCACCCGTCTTGCAACCACCCTCACGTCCGACTCCAGCGCCTTGAG
CAACCCACTCTTGGGTTCCCTCTCCGGTCCTGCTGGCGAAGCCTCCAGCA
AAGCGGGTACGGGCTTCATCATTATCGAAACCAACTACCGTGTATACGCA
TACACCTCGTCTCCCCTACAGATCTCCCTGATTGCTCTGTTCACCACACT
GAAATACCGCTTCCCCAACCTCATCACCGGCAAAATCACCCGCCAATCCG
TCCGCCGGGCCGTCGAGATGGGCATCACCGCCGACCAAATCATTTCCTAT
CTCTCTACTCACGCCCACCCGCAAATGCGCAAGCACAACGTCTCCCGCTC
GACCTCAAACCAGGCCGGGATCCCCCCGTCAGTCCTCCCGCCAACCGTGG
TGGACCAGATTCGACTTTGGCAGCTGGAGCGGGACCGTGTCAAAGCTACG
TCCGGATTCCTTTTCAAGGACTTTGTCAGTCTGGCAGAATACGAGGCGCC
ATGTCGCTATGCCGAAGAAATCGGTGTTCTGGCATGGAAGTCGGATCGCA
AACGCATGTTCTTCGTGACGAGGCATGAACAAGTGGCTGCGTTCTTAAGG
AGCCGGAAATAA back to topCoding sequence (CDS) from alignment at An14:121555..123116- >CBS51388_008591-T1 ID=CBS51388_008591-T1|Name=CBS51388_008591-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4311bp|location=Sequence derived from alignment at An14:121555..123116- (Aspergillus niger CBS 513.88)
AGAACGCGACAATGCACTCTCCATCCTAGGAAGACTGCATATTTTATCCA
ACACTGTTACGGCGGATAATGTCCGCGCCTACAAAGTCACCGATCCCTTC
GCCACTTCATTGCGACACGCTCTCACCGGCGCCGACCAAACACAATCTTT
TGGCGTCCTTTCACAAGTGCCTGCTGGCTCGGAAGTCTCGATCCCCGAAC
TTGATGAGTATGCGCGACGACAGTGGGAAGGAGTGCTGGGATACATGGTC
GGTACTGGAGGCATGGGAGGTCCCCAAGTGACCCTCAGCAAAGGCGTGAA
GGAGCTCCTGCAGGCGGGTCATCTGGTCGAGATCCGAGATCGTCGCGTCG
AAATCACCCAGGATGGGTTTGCCTTTGTCCTGCAAGATGTCAGCACGCAG
GTGTGGCATATCTTGATTCTTTACGTCGAGAGCGCCAGCGCCATCAAGAT
GGACAGTGTCGAAGTCCTCTCGTTCGTGTTCCTTCTCAGCAGTCTCGAAC
TCGGAAAATCATATGAAAAGAACCACCTCAGTTCGAAACAACTGCGCATG
CTGACCGACCTTGCCGACTTTGGTATCGTCTATCAAGAATCGCCGGATGC
ACCGCGTTTCTACCCCACCCGTCTTGCAACCACCCTCACGTCCGACTCCA
GCGCCTTGAGCAACCCACTCTTGGGTTCCCTCTCCGGTCCTGCTGGCGAA
GCCTCCAGCAAAGCGGGTACGGGCTTCATCATTATCGAAACCAACTACCG
TGTATACGCATACACCTCGTCTCCCCTACAGATCTCCCTGATTGCTCTGT
TCACCACACTGAAATACCGCTTCCCCAACCTCATCACCGGCAAAATCACC
CGCCAATCCGTCCGCCGGGCCGTCGAGATGGGCATCACCGCCGACCAAAT
CATTTCCTATCTCTCTACTCACGCCCACCCGCAAATGCGCAAGCACAACG
TCTCCCGCTCGACCTCAAACCAGGCCGGGATCCCCCCGTCAGTCCTCCCG
CCAACCGTGGTGGACCAGATTCGACTTTGGCAGCTGGAGCGGGACCGTGT
CAAAGCTACGTCCGGATTCCTTTTCAAGGACTTTGTCAGTCTGGCAGAAT
ACGAGGCGCCATGTCGCTATGCCGAAGAAATCGGTGTTCTGGCATGGAAG
TCGGATCGCAAACGCATGTTCTTCGTGACGAGGCATGAACAAGTGGCTGC
GTTCTTAAGGAGCCGGAAATAACAAAATGCTTTGTCATGGCACTTCTCTA
CCTAAAGGATCCGCTCCCCGCGGCGGATCTGGAGGCTTGGGTTAAATCGG
AGAGCTTGAAATGGCTGCCGCACCATCTTCTCGTCCCTTTGAATACCTCG
AAAGCCTTGCTGGCACTGTCTTCTACAAACTTTACCAGCAGCCATCAACG
GCTCTCGCCATTTTCAGGCGCATGCTGCCTGATCTGGAGAACGCGACAAT
GCACTCTCCATCCTAGGAAGACTGCATATTTTATCCAACACTGTTACGGC
GGATAATGTCCGCGCCTACAAAGTCACCGATCCCTTCGCCACTTCATTGC
GACACGCTCTCACCGGCGCCGACCAAACACAATCTTTTGGCGTCCTTTCA
CAAGTGCCTGCTGGCTCGGAAGTCTCGATCCCCGAACTTGATGAGTATGC
GCGACGACAGTGGGAAGGAGTGCTGGGATACATGGTCGGTACTGGAGGCA
TGGGAGGTCCCCAAGTGACCCTCAGCAAAGGCGTGAAGGAGCTCCTGCAG
GCGGGTCATCTGGTCGAGATCCGAGATCGTCGCGTCGAAATCACCCAGGA
TGGGTTTGCCTTTGTCCTGCAAGATGTCAGCACGCAGGTGTGGCATATCT
TGATTCTTTACGTCGAGAGCGCCAGCGCCATCAAGATGGACAGTGTCGAA
GTCCTCTCGTTCGTGTTCCTTCTCAGCAGTCTCGAACTCGGAAAATCATA
TGAAAAGAACCACCTCAGTTCGAAACAACTGCGCATGCTGACCGACCTTG
CCGACTTTGGTATCGTCTATCAAGAATCGCCGGATGCACCGCGTTTCTAC
CCCACCCGTCTTGCAACCACCCTCACGTCCGACTCCAGCGCCTTGAGCAA
CCCACTCTTGGGTTCCCTCTCCGGTCCTGCTGGCGAAGCCTCCAGCAAAG
CGGGTACGGGCTTCATCATTATCGAAACCAACTACCGTGTATACGCATAC
ACCTCGTCTCCCCTACAGATCTCCCTGATTGCTCTGTTCACCACACTGAA
ATACCGCTTCCCCAACCTCATCACCGGCAAAATCACCCGCCAATCCGTCC
GCCGGGCCGTCGAGATGGGCATCACCGCCGACCAAATCATTTCCTATCTC
TCTACTCACGCCCACCCGCAAATGCGCAAGCACAACGTCTCCCGCTCGAC
CTCAAACCAGGCCGGGATCCCCCCGTCAGTCCTCCCGCCAACCGTGGTGG
ACCAGATTCGACTTTGGCAGCTGGAGCGGGACCGTGTCAAAGCTACGTCC
GGATTCCTTTTCAAGGACTTTGTCAGTCTGGCAGAATACGAGGCGCCATG
TCGCTATGCCGAAGAAATCGGTGTTCTGGCATGGAAGTCGGATCGCAAAC
GCATGTTCTTCGTGACGAGGCATGAACAAGTGGCTGCGTTCTTAAGGAGC
CGGAAATAACAAAATGCTTTGTCATGGCACTTCTCTACCTAAAGGATCCG
CTCCCCGCGGCGGATCTGGAGGCTTGGGTTAAATCGGAGAGCTTGAAATG
GCTGCCGCACCATCTTCTCGTCCCTTTGAATACCTCGAAAGCCTTGCTGG
CACTGTCTTCTACAAACTTTACCAGCAGCCATCAACGGCTCTCGCCATTT
TCAGGCGCATGCTGCCTGATCTGGAGAACGCGACAATGCACTCTCCATCC
TAGGAAGACTGCATATTTTATCCAACACTGTTACGGCGGATAATGTCCGC
GCCTACAAAGTCACCGATCCCTTCGCCACTTCATTGCGACACGCTCTCAC
CGGCGCCGACCAAACACAATCTTTTGGCGTCCTTTCACAAGTGCCTGCTG
GCTCGGAAGTCTCGATCCCCGAACTTGATGAGTATGCGCGACGACAGTGG
GAAGGAGTGCTGGGATACATGGTCGGTACTGGAGGCATGGGAGGTCCCCA
AGTGACCCTCAGCAAAGGCGTGAAGGAGCTCCTGCAGGCGGGTCATCTGG
TCGAGATCCGAGATCGTCGCGTCGAAATCACCCAGGATGGGTTTGCCTTT
GTCCTGCAAGATGTCAGCACGCAGGTGTGGCATATCTTGATTCTTTACGT
CGAGAGCGCCAGCGCCATCAAGATGGACAGTGTCGAAGTCCTCTCGTTCG
TGTTCCTTCTCAGCAGTCTCGAACTCGGAAAATCATATGAAAAGAACCAC
CTCAGTTCGAAACAACTGCGCATGCTGACCGACCTTGCCGACTTTGGTAT
CGTCTATCAAGAATCGCCGGATGCACCGCGTTTCTACCCCACCCGTCTTG
CAACCACCCTCACGTCCGACTCCAGCGCCTTGAGCAACCCACTCTTGGGT
TCCCTCTCCGGTCCTGCTGGCGAAGCCTCCAGCAAAGCGGGTACGGGCTT
CATCATTATCGAAACCAACTACCGTGTATACGCATACACCTCGTCTCCCC
TACAGATCTCCCTGATTGCTCTGTTCACCACACTGAAATACCGCTTCCCC
AACCTCATCACCGGCAAAATCACCCGCCAATCCGTCCGCCGGGCCGTCGA
GATGGGCATCACCGCCGACCAAATCATTTCCTATCTCTCTACTCACGCCC
ACCCGCAAATGCGCAAGCACAACGTCTCCCGCTCGACCTCAAACCAGGCC
GGGATCCCCCCGTCAGTCCTCCCGCCAACCGTGGTGGACCAGATTCGACT
TTGGCAGCTGGAGCGGGACCGTGTCAAAGCTACGTCCGGATTCCTTTTCA
AGGACTTTGTCAGTCTGGCAGAATACGAGGCGCCATGTCGCTATGCCGAA
GAAATCGGTGTTCTGGCATGGAAGTCGGATCGCAAACGCATGTTCTTCGT
GACGAGGCATGAACAAGTGGCTGCGTTCTTAAGGAGCCGGAAATAACAAA
ATGCTTTGTCATGGCACTTCTCTACCTAAAGGATCCGCTCCCCGCGGCGG
ATCTGGAGGCTTGGGTTAAATCGGAGAGCTTGAAATGGCTGCCGCACCAT
CTTCTCGTCCCTTTGAATACCTCGAAAGCCTTGCTGGCACTGTCTTCTAC
AAACTTTACCAGCAGCCATCAACGGCTCTCGCCATTTTCAGGCGCATGCT
GCCTGATCTGG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0000439 | transcription factor TFIIH core complex |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0001671 | ATPase activator activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006289 | nucleotide-excision repair |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09261QR8 |
| DBxref | InterPro:IPR004598 |
| DBxref | InterPro:IPR040662 |
| DBxref | PFAM:PF18307 |
| DBxref | PFAM:PF03849 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An14 | supercontig | An14:121555..123116 - |
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