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Sequences
The following sequences are available for this feature:
mRNA from alignment at An16:853028..854533+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_010090-T1 ID=CBS51388_010090-T1|Name=CBS51388_010090-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1506bp|location=Sequence derived from alignment at An16:853028..854533+ (Aspergillus niger CBS 513.88)
ATGGCCGATTATCTTTACGATCTTCTAGCCCCTCATCTGGCCTCGACAAA
GGCCGCCGCCGCCCTCTGCGATCCCGACCGCGATACCACCACTGCTCAAT
ACCTCAACCGTCTCCCTACGCTCTCCCTCCAAGCATTACAGTCCACGGAA
CCTCAATCCCTAACTCAGTCCTCTCATTCCACCCTTCTGTCGCTGCAAGC
TCTGTCGAATCGCTCTTACAAGGCCTTTGTCACGTCCGCCGATGGCCTGT
CCAATCTCCGCGCGTCCATCCCCCAATTGGCCCAGAATGCACAGCAACTG
CGAGATGCGGTCCCAAAACTCGACGAAGAGGCAGTCCGGTTCTCGTCCAA
ATACAGCCGAGCAGCCGAGAATGTCGCTCTGGAGCAACGGAAGAAGGTGA
TGCAGCTGGCCCGGAACGTCGATCGGCTGTCCGATATCCTTGAGCTCCCC
ACGCTGCTCGCAACAGCCGTCTCTTCCGCGGCCGCCAGTTCTACAACGAC
AGGCAGCTCGGTATCCACGACGTACTCTACAGCATTGGATCTGTACGCGC
ATATCAAGCGATTACAGACACTCTATCCCGATTCGCCGCTCATCAAAGAC
GTGGTCTCCCAGGCCGAAGATGCTATGAAGGACATGACGTCGAATCTGAT
CGCAGGTCTTCGGGCACAGAACTTGCGACTAGCAGCTGCTATGAGGACGG
TGGGTTGGCTGCGCAGGGTGGCACCAGAATTGGACAATCTCCACCACGAA
GGATCACCGGCCGCGGGGGAGGGTGCATTGGGAGCTATATTTCTGATCTG
CAGGCTCGCGAACTTGATCACGATGCTAGAAGCTCTTGATCCTTTACGGG
AGTTGGCTGATCAGGAGACACAGCGCAGGGCCCCGAGCACGGACAGGAAG
AACGGGACGACGGGGACCTGGTCCGAAGGACACCAGACCGAAAAGTATCT
GAAACGGTATATCGAGATCTTTCGCGAGCAGAGCTTTGCGATCGTCTCTC
TCTATAAAAACATTTTTACTCCGGATCAGTCGGAGTCAGAGCTCGCTGTG
ACCGGCTTACGGAGCATTGATGCGCGGATCAAAGCTGCGGCATCGCGACC
CTCTCGCCCAGAGGATCCACTCCAGTGCCTTCCACCGGCACTTGCTACCT
TTCCTATGCACCTAGTACAACTGCTGACGGACACCTTGCGCACCTATCTC
CCCAACGTCCGGGATAAAAGCTCCCGTGAGAGTCTCTTGACCCAGGTGCT
GTACTGCGCTGCCAGCTTGGGTCGACTGGGAGGGGACTTTGGCATGATTC
TGACCGAGCTCAGCGAGGCAGCGGATGAAGAACAAGAGGAAAGCGATGCC
GATGCCGATGACTTGGCCTATGAATGGGAGGAGGTGACTCGGAAACACAG
AGCCTTGGCAGGACGCCTGGAGCAGCTGACAGGAGGTACAACTCCCGGGT
CCTCAACCAAAGGACATTCGTCGCGGCAAGCCTTGCCCATGCAAGGAGAC
ATTTGA back to topCoding sequence (CDS) from alignment at An16:853028..854533+ >CBS51388_010090-T1 ID=CBS51388_010090-T1|Name=CBS51388_010090-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1506bp|location=Sequence derived from alignment at An16:853028..854533+ (Aspergillus niger CBS 513.88)
ATGGCCGATTATCTTTACGATCTTCTAGCCCCTCATCTGGCCTCGACAAA
GGCCGCCGCCGCCCTCTGCGATCCCGACCGCGATACCACCACTGCTCAAT
ACCTCAACCGTCTCCCTACGCTCTCCCTCCAAGCATTACAGTCCACGGAA
CCTCAATCCCTAACTCAGTCCTCTCATTCCACCCTTCTGTCGCTGCAAGC
TCTGTCGAATCGCTCTTACAAGGCCTTTGTCACGTCCGCCGATGGCCTGT
CCAATCTCCGCGCGTCCATCCCCCAATTGGCCCAGAATGCACAGCAACTG
CGAGATGCGGTCCCAAAACTCGACGAAGAGGCAGTCCGGTTCTCGTCCAA
ATACAGCCGAGCAGCCGAGAATGTCGCTCTGGAGCAACGGAAGAAGGTGA
TGCAGCTGGCCCGGAACGTCGATCGGCTGTCCGATATCCTTGAGCTCCCC
ACGCTGCTCGCAACAGCCGTCTCTTCCGCGGCCGCCAGTTCTACAACGAC
AGGCAGCTCGGTATCCACGACGTACTCTACAGCATTGGATCTGTACGCGC
ATATCAAGCGATTACAGACACTCTATCCCGATTCGCCGCTCATCAAAGAC
GTGGTCTCCCAGGCCGAAGATGCTATGAAGGACATGACGTCGAATCTGAT
CGCAGGTCTTCGGGCACAGAACTTGCGACTAGCAGCTGCTATGAGGACGG
TGGGTTGGCTGCGCAGGGTGGCACCAGAATTGGACAATCTCCACCACGAA
GGATCACCGGCCGCGGGGGAGGGTGCATTGGGAGCTATATTTCTGATCTG
CAGGCTCGCGAACTTGATCACGATGCTAGAAGCTCTTGATCCTTTACGGG
AGTTGGCTGATCAGGAGACACAGCGCAGGGCCCCGAGCACGGACAGGAAG
AACGGGACGACGGGGACCTGGTCCGAAGGACACCAGACCGAAAAGTATCT
GAAACGGTATATCGAGATCTTTCGCGAGCAGAGCTTTGCGATCGTCTCTC
TCTATAAAAACATTTTTACTCCGGATCAGTCGGAGTCAGAGCTCGCTGTG
ACCGGCTTACGGAGCATTGATGCGCGGATCAAAGCTGCGGCATCGCGACC
CTCTCGCCCAGAGGATCCACTCCAGTGCCTTCCACCGGCACTTGCTACCT
TTCCTATGCACCTAGTACAACTGCTGACGGACACCTTGCGCACCTATCTC
CCCAACGTCCGGGATAAAAGCTCCCGTGAGAGTCTCTTGACCCAGGTGCT
GTACTGCGCTGCCAGCTTGGGTCGACTGGGAGGGGACTTTGGCATGATTC
TGACCGAGCTCAGCGAGGCAGCGGATGAAGAACAAGAGGAAAGCGATGCC
GATGCCGATGACTTGGCCTATGAATGGGAGGAGGTGACTCGGAAACACAG
AGCCTTGGCAGGACGCCTGGAGCAGCTGACAGGAGGTACAACTCCCGGGT
CCTCAACCAAAGGACATTCGTCGCGGCAAGCCTTGCCCATGCAAGGAGAC
ATTTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0017119 | Golgi transport complex |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR007255 |
| DBxref | PFAM:PF08700 |
| DBxref | PFAM:PF04124 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An16 | supercontig | An16:853028..854533 + |
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