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Sequences
The following sequences are available for this feature:
mRNA from alignment at An18:493327..493796- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_010855-T1 ID=CBS51388_010855-T1|Name=CBS51388_010855-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=470bp|location=Sequence derived from alignment at An18:493327..493796- (Aspergillus niger CBS 513.88)
ATGGGTCCCCCTAGGCGCAAGGTTCTCGCTACGGCGGAAGAGACCATGTT
CCCGCCGGATGAGCTGTCTCAGGGCCATCTAATTGCCCGGGCTATCAAGG
CGACCGGAAACAACATCTACTCGGTGGAACTTCCCTCGAAGGAGTCGGTT
TTGGTGGAGCTCCCTGCCCGCTTCCGATCGACCATCTGGATCAAGCGGGG
TTCCTACGTGGTCATCGATACCAATGCTCTTGAGGGCCGCGACAACAAGC
TCAAGGGAGAAATAGTCAACATCGTTCGTGATGAGAAAGCGTGGCGCAAA
GCCCCGTTTTGGTGAGTGGATCCCTCAATCGCGGTGCCTGGGGCTACTAC
TGATCCCTCTGCAGGCCAAAGGAGTTCGCTAAGCAAGCTGCTGTTGTCGC
CGACGACTCGGACGAAGAGGATGAGTCCAATGTCGGCAAGATGCCTTCTT
CCGATGAGTCGGATGCTTGA back to topCoding sequence (CDS) from alignment at An18:493327..493796- >CBS51388_010855-T1 ID=CBS51388_010855-T1|Name=CBS51388_010855-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=834bp|location=Sequence derived from alignment at An18:493327..493796- (Aspergillus niger CBS 513.88)
GCCAAAGGAGTTCGCTAAGCAAGCTGCTGTTGTCGCCGACGACTCGGACG
AAGAGGATGAGTCCAATGTCGGCAAGATGCCTTCTTCCGATGAGTCGGAT
GCTTGAATGGGTCCCCCTAGGCGCAAGGTTCTCGCTACGGCGGAAGAGAC
CATGTTCCCGCCGGATGAGCTGTCTCAGGGCCATCTAATTGCCCGGGCTA
TCAAGGCGACCGGAAACAACATCTACTCGGTGGAACTTCCCTCGAAGGAG
TCGGTTTTGGTGGAGCTCCCTGCCCGCTTCCGATCGACCATCTGGATCAA
GCGGGGTTCCTACGTGGTCATCGATACCAATGCTCTTGAGGGCCGCGACA
ACAAGCTCAAGGGAGAAATAGTCAACATCGTTCGTGATGAGAAAGCGTGG
CGCAAAGCCCCGTTTTGGCCAAAGGAGTTCGCTAAGCAAGCTGCTGTTGT
CGCCGACGACTCGGACGAAGAGGATGAGTCCAATGTCGGCAAGATGCCTT
CTTCCGATGAGTCGGATGCTTGAATGGGTCCCCCTAGGCGCAAGGTTCTC
GCTACGGCGGAAGAGACCATGTTCCCGCCGGATGAGCTGTCTCAGGGCCA
TCTAATTGCCCGGGCTATCAAGGCGACCGGAAACAACATCTACTCGGTGG
AACTTCCCTCGAAGGAGTCGGTTTTGGTGGAGCTCCCTGCCCGCTTCCGA
TCGACCATCTGGATCAAGCGGGGTTCCTACGTGGTCATCGATACCAATGC
TCTTGAGGGCCGCGACAACAAGCTCAAGGGAGAAATAGTCAACATCGTTC
GTGATGAGAAAGCGTGGCGCAAAGCCCCGTTTTG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003723 | RNA binding |
| GO:0003743 | translation initiation factor activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006413 | translational initiation |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR012340 |
| DBxref | InterPro:IPR006196 |
| DBxref | InterPro:IPR001253 |
| DBxref | PFAM:PF01176 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An18 | supercontig | An18:493327..493796 - |
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