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Sequences
The following sequences are available for this feature:
mRNA from alignment at An18:892532..893166- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_010981-T1 ID=CBS51388_010981-T1|Name=CBS51388_010981-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=635bp|location=Sequence derived from alignment at An18:892532..893166- (Aspergillus niger CBS 513.88)
ATGCCCTCCGCATCCTCCGCACCGGCAGCTTCCTCTCTCTCCTCCGGCCC
CAAAACCCTCACCCAGAACTCCTCCATCTACGACATCGCCCACACAGTCT
GGCAGCAGTACCTGGCGACCACGCCGCAGCGCACAATGCTGCTAGATGCG
TTCATGGGATTCTTGGTGCTTGTCGGTGGTGTGCAGTTTGTTTATTGTGT
CGTTGGGGGGAATTATGTGAGTATACTTTTCCCCATTGGATATGGATGAG
TTTGGGTTCAGAGAAATTGGAGTGTGAGAGTTTGGCTAATATTGGAATCT
TTGTGACAGCCGTTCAATGCCTTCCTGAGTGGTTTCTGTGCTGCCGTTGG
TCAGTTTGTTCTTACGGCTAGTTTGAGGATGCAGACTAGTGGTGGTTCGA
CTTCGTCGACTGGGGGTGTGAGTGGTGGGAAGGGGAAGGCGGGGAAGAAG
GGTGCTGCGGCTGGTGCTGGGGAGGAGGGGAGTGGTGTTTCGCCTGAGAG
GTTAGTTTATTTACTTTACTTGGGTGGTTTCTTTGGGGTGAGACTGGATT
GCTAACTGTTTTGTGTAGGGCATTCGCGGATTATGTCTTTGGGAGTCTGA
TTCTGCATTTCTTCTGTATTAACTTCATTAACTAG back to topCoding sequence (CDS) from alignment at An18:892532..893166- >CBS51388_010981-T1 ID=CBS51388_010981-T1|Name=CBS51388_010981-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1422bp|location=Sequence derived from alignment at An18:892532..893166- (Aspergillus niger CBS 513.88)
GGCATTCGCGGATTATGTCTTTGGGAGTCTGATTCTGCATTTCTTCTGTA
TTAACTTCATTAACTAGCCGTTCAATGCCTTCCTGAGTGGTTTCTGTGCT
GCCGTTGGTCAGTTTGTTCTTACGGCTAGTTTGAGGATGCAGACTAGTGG
TGGTTCGACTTCGTCGACTGGGGGTGTGAGTGGTGGGAAGGGGAAGGCGG
GGAAGAAGGGTGCTGCGGCTGGTGCTGGGGAGGAGGGGAGTGGTGTTTCG
CCTGAGAGATGCCCTCCGCATCCTCCGCACCGGCAGCTTCCTCTCTCTCC
TCCGGCCCCAAAACCCTCACCCAGAACTCCTCCATCTACGACATCGCCCA
CACAGTCTGGCAGCAGTACCTGGCGACCACGCCGCAGCGCACAATGCTGC
TAGATGCGTTCATGGGATTCTTGGTGCTTGTCGGTGGTGTGCAGTTTGTT
TATTGTGTCGTTGGGGGGAATTATGGCATTCGCGGATTATGTCTTTGGGA
GTCTGATTCTGCATTTCTTCTGTATTAACTTCATTAACTAGCCGTTCAAT
GCCTTCCTGAGTGGTTTCTGTGCTGCCGTTGGTCAGTTTGTTCTTACGGC
TAGTTTGAGGATGCAGACTAGTGGTGGTTCGACTTCGTCGACTGGGGGTG
TGAGTGGTGGGAAGGGGAAGGCGGGGAAGAAGGGTGCTGCGGCTGGTGCT
GGGGAGGAGGGGAGTGGTGTTTCGCCTGAGAGATGCCCTCCGCATCCTCC
GCACCGGCAGCTTCCTCTCTCTCCTCCGGCCCCAAAACCCTCACCCAGAA
CTCCTCCATCTACGACATCGCCCACACAGTCTGGCAGCAGTACCTGGCGA
CCACGCCGCAGCGCACAATGCTGCTAGATGCGTTCATGGGATTCTTGGTG
CTTGTCGGTGGTGTGCAGTTTGTTTATTGTGTCGTTGGGGGGAATTATGG
CATTCGCGGATTATGTCTTTGGGAGTCTGATTCTGCATTTCTTCTGTATT
AACTTCATTAACTAGCCGTTCAATGCCTTCCTGAGTGGTTTCTGTGCTGC
CGTTGGTCAGTTTGTTCTTACGGCTAGTTTGAGGATGCAGACTAGTGGTG
GTTCGACTTCGTCGACTGGGGGTGTGAGTGGTGGGAAGGGGAAGGCGGGG
AAGAAGGGTGCTGCGGCTGGTGCTGGGGAGGAGGGGAGTGGTGTTTCGCC
TGAGAGATGCCCTCCGCATCCTCCGCACCGGCAGCTTCCTCTCTCTCCTC
CGGCCCCAAAACCCTCACCCAGAACTCCTCCATCTACGACATCGCCCACA
CAGTCTGGCAGCAGTACCTGGCGACCACGCCGCAGCGCACAATGCTGCTA
GATGCGTTCATGGGATTCTTGGTGCTTGTCGGTGGTGTGCAGTTTGTTTA
TTGTGTCGTTGGGGGGAATTAT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
| GO:0008250 | oligosaccharyltransferase complex |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09265JA7 |
| DBxref | InterPro:IPR003038 |
| DBxref | PFAM:PF02109 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An18 | supercontig | An18:892532..893166 - |
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