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Sequences
The following sequences are available for this feature:
mRNA from alignment at An18:988576..990466- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_011010-T1 ID=CBS51388_011010-T1|Name=CBS51388_011010-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1891bp|location=Sequence derived from alignment at An18:988576..990466- (Aspergillus niger CBS 513.88)
ATGGAGCCCCCAGCCAAGAGGTCGCGCAAGCTGCTCGATGACGACAGCTC
CAGCGACTCAGGAGACGAGTCCGGCGGAGTTCCCATCACCAACGAGGACG
TTACATTCAAGATCAACGAAGAGTATGCGCGCCGCTTCGAATACAACAAG
AAGAGAGAAGAAAAGCAGCAATGTAAGTTCCTATGCATCTACAATCTGCA
TGCGAGGAGAAACTAATCTCTGTTCTACAATAGTGGAGTCTAAATACGGA
AAATCTGTGCTTGGCAAACGTCGTGATCGCGATGGTGAAGATGAGTCCGG
CGACTCGGAGGATGATTCTACCTCTGAAGAAGAGGACGAGGATGGAGAAT
TAGCCACCGCCGCCCTGGATGCCGAGATTATGGCCACGCTGAACGCGATC
AGATCAAAGGACCCTCGGGTGTACGATAGCAATGCCACTTTCTACACCGG
GACCGACGAGGAGGCGAAACCCGAAAGCTCTGAAAAGAAAGAAAAGCCTA
TGACCCTTCGTGACTACCATCGTGAGAATTTGTTGAGTGGCGCCAATTTG
GCAGATGAGGACGCATCTGAGGCGCCGAAGACCTACGCTCAAGAGCAGGA
GGAATTGAAGGATGCGGTTGTCCGTGAAATGCACGCCGCTGCCGGTAAAG
GTGATGATGGTGAGGACGACGAAGATGACTTCCTTGTTGCCAAATCGGCG
CCTGAACCTCTTCCGGCGGCCAAGAAGGATGTCAATCTGGATGTTGAGAA
TGCGGACAAGGACCCGGAAACCTTCCTTTCAAACTTCATGTCGGCAAGAG
CGTGGATACCTGCTGGTAGATCGGAACTTCAACCGTTCGAGTCTGATGAC
GAAGAGGAAGATCAACGGGCAGAGGCATTCGAAGAGGCATACAACTTCCG
CTTCGAAGATCCCAGCAAAATCAACGCTACCTTAATCACTCACTCTCGTG
ACACAACCAACAAGCAGTCGGTTCGCAGAGAAGAAAAGAGCAGCCGAAAG
AAACGCAGAGATGCGGAGAGGCAGCAGATGGAAGAGGAGAAGAAGCAGCG
CGAGACGGAAAAGAACCGCCTGCGGAAGCTCAAGATGGAAGAACTTCAAG
AGAAGGTCAATCAGATCAAGGAAGTTGCCGGCATTCGTGCAAATGAGCTG
ACTGACGAAGATTGGGTCAGCTTCTTGGACGCTGCCTGGGATGACAAGAA
CTGGGAGGAGGAGATGCAGAAGCGTTTTGGTGAAGATTACTACGCGGAGG
GCGATAAGGAAGGAAGCGGTGACGAGTCAGGAAAGAAGAAGCGTCTGAAG
AAGCCTACGTGGGATGATGATATTGATATCAAGGATCTCGTGCCCGACTT
CGAGGAAGAGGAGAAGCCCGCCGTGGATGGTTCTGATGTCGAGATGGAGG
ATGATGAAGAGGAAAGTAACAAGAAGAGCAAGGCGCAGGAGAGACGAGAC
CAGAAGCGTGAAGCGCGCAAAGACCGACTTCGTATTCAGGAGGCCGTGGA
TCGCAACTTGGATCTTGATATCAGCCTTCTTCCGGGTGCGACCAGGAAGA
ATGCTACTGGGTTCCGCTACCGTGAGACCTCGCCTCAGAGTTTTGGATTG
ACTGCACGAGATATCCTCATGGCCGACGACACCCATTTGAACCAGTTTGC
GGGCTTGAAAAAGCTTGCTTCGTTCCGTGACCCTGAGAAGAAGAGCCGGG
ATCAGAGGAAGCTGGGCAAGAAGGCCCGCCTAAGGCAGTGGCGCAAGGAC
ACCTTTGGTGACGAAGAAGGCCCCAGGGTTCCCTCGGAGGCGCCACGGGC
ACCTACGCCGGACAAGGAGGATGCCGGTAAGGTTGATATTCGTGAAGGTG
AACCCAAGAAGAAGAGGAGAAAGAGAAACAAGAAGAACTGA back to topCoding sequence (CDS) from alignment at An18:988576..990466- >CBS51388_011010-T1 ID=CBS51388_011010-T1|Name=CBS51388_011010-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3660bp|location=Sequence derived from alignment at An18:988576..990466- (Aspergillus niger CBS 513.88)
TGGAGTCTAAATACGGAAAATCTGTGCTTGGCAAACGTCGTGATCGCGAT
GGTGAAGATGAGTCCGGCGACTCGGAGGATGATTCTACCTCTGAAGAAGA
GGACGAGGATGGAGAATTAGCCACCGCCGCCCTGGATGCCGAGATTATGG
CCACGCTGAACGCGATCAGATCAAAGGACCCTCGGGTGTACGATAGCAAT
GCCACTTTCTACACCGGGACCGACGAGGAGGCGAAACCCGAAAGCTCTGA
AAAGAAAGAAAAGCCTATGACCCTTCGTGACTACCATCGTGAGAATTTGT
TGAGTGGCGCCAATTTGGCAGATGAGGACGCATCTGAGGCGCCGAAGACC
TACGCTCAAGAGCAGGAGGAATTGAAGGATGCGGTTGTCCGTGAAATGCA
CGCCGCTGCCGGTAAAGGTGATGATGGTGAGGACGACGAAGATGACTTCC
TTGTTGCCAAATCGGCGCCTGAACCTCTTCCGGCGGCCAAGAAGGATGTC
AATCTGGATGTTGAGAATGCGGACAAGGACCCGGAAACCTTCCTTTCAAA
CTTCATGTCGGCAAGAGCGTGGATACCTGCTGGTAGATCGGAACTTCAAC
CGTTCGAGTCTGATGACGAAGAGGAAGATCAACGGGCAGAGGCATTCGAA
GAGGCATACAACTTCCGCTTCGAAGATCCCAGCAAAATCAACGCTACCTT
AATCACTCACTCTCGTGACACAACCAACAAGCAGTCGGTTCGCAGAGAAG
AAAAGAGCAGCCGAAAGAAACGCAGAGATGCGGAGAGGCAGCAGATGGAA
GAGGAGAAGAAGCAGCGCGAGACGGAAAAGAACCGCCTGCGGAAGCTCAA
GATGGAAGAACTTCAAGAGAAGGTCAATCAGATCAAGGAAGTTGCCGGCA
TTCGTGCAAATGAGCTGACTGACGAAGATTGGGTCAGCTTCTTGGACGCT
GCCTGGGATGACAAGAACTGGGAGGAGGAGATGCAGAAGCGTTTTGGTGA
AGATTACTACGCGGAGGGCGATAAGGAAGGAAGCGGTGACGAGTCAGGAA
AGAAGAAGCGTCTGAAGAAGCCTACGTGGGATGATGATATTGATATCAAG
GATCTCGTGCCCGACTTCGAGGAAGAGGAGAAGCCCGCCGTGGATGGTTC
TGATGTCGAGATGGAGGATGATGAAGAGGAAAGTAACAAGAAGAGCAAGG
CGCAGGAGAGACGAGACCAGAAGCGTGAAGCGCGCAAAGACCGACTTCGT
ATTCAGGAGGCCGTGGATCGCAACTTGGATCTTGATATCAGCCTTCTTCC
GGGTGCGACCAGGAAGAATGCTACTGGGTTCCGCTACCGTGAGACCTCGC
CTCAGAGTTTTGGATTGACTGCACGAGATATCCTCATGGCCGACGACACC
CATTTGAACCAGTTTGCGGGCTTGAAAAAGCTTGCTTCGTTCCGTGACCC
TGAGAAGAAGAGCCGGGATCAGAGGAAGCTGGGCAAGAAGGCCCGCCTAA
GGCAGTGGCGCAAGGACACCTTTGGTGACGAAGAAGGCCCCAGGGTTCCC
TCGGAGGCGCCACGGGCACCTACGCCGGACAAGGAGGATGCCGGTAAGGT
TGATATTCGTGAAGGTGAACCCAAGAAGAAGAGGAGAAAGAGAAACAAGA
AGAACTGAATGGAGCCCCCAGCCAAGAGGTCGCGCAAGCTGCTCGATGAC
GACAGCTCCAGCGACTCAGGAGACGAGTCCGGCGGAGTTCCCATCACCAA
CGAGGACGTTACATTCAAGATCAACGAAGAGTATGCGCGCCGCTTCGAAT
ACAACAAGAAGAGAGAAGAAAAGCAGCAATTGGAGTCTAAATACGGAAAA
TCTGTGCTTGGCAAACGTCGTGATCGCGATGGTGAAGATGAGTCCGGCGA
CTCGGAGGATGATTCTACCTCTGAAGAAGAGGACGAGGATGGAGAATTAG
CCACCGCCGCCCTGGATGCCGAGATTATGGCCACGCTGAACGCGATCAGA
TCAAAGGACCCTCGGGTGTACGATAGCAATGCCACTTTCTACACCGGGAC
CGACGAGGAGGCGAAACCCGAAAGCTCTGAAAAGAAAGAAAAGCCTATGA
CCCTTCGTGACTACCATCGTGAGAATTTGTTGAGTGGCGCCAATTTGGCA
GATGAGGACGCATCTGAGGCGCCGAAGACCTACGCTCAAGAGCAGGAGGA
ATTGAAGGATGCGGTTGTCCGTGAAATGCACGCCGCTGCCGGTAAAGGTG
ATGATGGTGAGGACGACGAAGATGACTTCCTTGTTGCCAAATCGGCGCCT
GAACCTCTTCCGGCGGCCAAGAAGGATGTCAATCTGGATGTTGAGAATGC
GGACAAGGACCCGGAAACCTTCCTTTCAAACTTCATGTCGGCAAGAGCGT
GGATACCTGCTGGTAGATCGGAACTTCAACCGTTCGAGTCTGATGACGAA
GAGGAAGATCAACGGGCAGAGGCATTCGAAGAGGCATACAACTTCCGCTT
CGAAGATCCCAGCAAAATCAACGCTACCTTAATCACTCACTCTCGTGACA
CAACCAACAAGCAGTCGGTTCGCAGAGAAGAAAAGAGCAGCCGAAAGAAA
CGCAGAGATGCGGAGAGGCAGCAGATGGAAGAGGAGAAGAAGCAGCGCGA
GACGGAAAAGAACCGCCTGCGGAAGCTCAAGATGGAAGAACTTCAAGAGA
AGGTCAATCAGATCAAGGAAGTTGCCGGCATTCGTGCAAATGAGCTGACT
GACGAAGATTGGGTCAGCTTCTTGGACGCTGCCTGGGATGACAAGAACTG
GGAGGAGGAGATGCAGAAGCGTTTTGGTGAAGATTACTACGCGGAGGGCG
ATAAGGAAGGAAGCGGTGACGAGTCAGGAAAGAAGAAGCGTCTGAAGAAG
CCTACGTGGGATGATGATATTGATATCAAGGATCTCGTGCCCGACTTCGA
GGAAGAGGAGAAGCCCGCCGTGGATGGTTCTGATGTCGAGATGGAGGATG
ATGAAGAGGAAAGTAACAAGAAGAGCAAGGCGCAGGAGAGACGAGACCAG
AAGCGTGAAGCGCGCAAAGACCGACTTCGTATTCAGGAGGCCGTGGATCG
CAACTTGGATCTTGATATCAGCCTTCTTCCGGGTGCGACCAGGAAGAATG
CTACTGGGTTCCGCTACCGTGAGACCTCGCCTCAGAGTTTTGGATTGACT
GCACGAGATATCCTCATGGCCGACGACACCCATTTGAACCAGTTTGCGGG
CTTGAAAAAGCTTGCTTCGTTCCGTGACCCTGAGAAGAAGAGCCGGGATC
AGAGGAAGCTGGGCAAGAAGGCCCGCCTAAGGCAGTGGCGCAAGGACACC
TTTGGTGACGAAGAAGGCCCCAGGGTTCCCTCGGAGGCGCCACGGGCACC
TACGCCGGACAAGGAGGATGCCGGTAAGGTTGATATTCGTGAAGGTGAAC
CCAAGAAGAAGAGGAGAAAGAGAAACAAGAAGAACTGAATGGAGCCCCCA
GCCAAGAGGTCGCGCAAGCTGCTCGATGACGACAGCTCCAGCGACTCAGG
AGACGAGTCCGGCGGAGTTCCCATCACCAACGAGGACGTTACATTCAAGA
TCAACGAAGAGTATGCGCGCCGCTTCGAATACAACAAGAAGAGAGAAGAA
AAGCAGCAAT back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09262POL |
| DBxref | InterPro:IPR018034 |
| DBxref | InterPro:IPR024626 |
| DBxref | PFAM:PF12936 |
| DBxref | PFAM:PF05178 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An18 | supercontig | An18:988576..990466 - |
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